Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36919 Davidia involucrata HOM05D000141 ORTHO05D004993 1.3e-76 289.7 152 100.0
Dinv13609 Davidia involucrata HOM05D000141 ORTHO05D004993 3.7e-74 281.6 152 96.1
Actinidia25312 Actinidia chinensis HOM05D000141 ORTHO05D004993 2.5e-70 268.9 152 90.1
Rhsim10G0172400 Rhododendron simsii HOM05D000141 ORTHO05D004993 1.6e-69 266.2 150 90.7
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 4.6e-69 264.6 151 90.1
Atru.chr3.1257 Acer truncatum HOM05D000141 ORTHO05D004993 7.9e-69 263.8 152 88.8
Thecc.01G091400 Theobroma cacao HOM05D000141 ORTHO05D004993 1.0e-68 263.5 152 89.5
CSS0021935 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 2.3e-68 262.3 150 91.3
vmacro13004 Vaccinium macrocarpon HOM05D000141 ORTHO05D004993 8.7e-68 260.4 150 89.3
TWI77G1015 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 1.5e-67 259.6 152 88.2
Ciclev10024724m.g Citrus clementina HOM05D000141 ORTHO05D004993 1.9e-67 259.2 152 87.5
TWI74G0717 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 1.9e-67 259.2 152 87.5
Haze_03861 Corylus avellana HOM05D000141 ORTHO05D004993 3.3e-67 258.5 152 88.2
Duzib147G0545 Durio zibethinus HOM05D000141 ORTHO05D004993 4.3e-67 258.1 152 88.2
RcHm_v2.0_Chr2g0111301 Rosa chinensis HOM05D000141 ORTHO05D004993 4.3e-67 258.1 152 86.8
Cpa.g.sc55.32 Carica papaya HOM05D000141 ORTHO05D004993 5.7e-67 257.7 150 86.7
Potri.007G010700 Populus trichocarpa HOM05D000141 ORTHO05D004993 5.7e-67 257.7 152 86.2
Prupe.6G198800 Prunus persica HOM05D000141 ORTHO05D004993 1.3e-66 256.5 152 86.2
CiPaw.07G048100 Carya illinoinensis HOM05D000141 ORTHO05D004993 2.1e-66 255.8 152 87.5
Peaxi162Scf00778g00009 Petunia axillaris HOM05D000141 ORTHO05D004993 2.8e-66 255.4 152 86.8
FAN28G0107 Fragaria x ananassa HOM05D000141 ORTHO05D004993 3.7e-66 255.0 152 85.5
Nitab4.5_0025132g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004993 3.7e-66 255.0 152 86.8
Oeu012465.2 Olea europaea HOM05D000141 ORTHO05D004993 3.7e-66 255.0 152 86.8
MELO3C007717.2 Cucumis melo HOM05D000141 ORTHO05D004993 4.8e-66 254.6 150 88.0
FvH4_1g19720 Fragaria vesca HOM05D000141 ORTHO05D004993 4.8e-66 254.6 152 85.5
FAN19G2112 Fragaria x ananassa HOM05D000141 ORTHO05D004993 4.8e-66 254.6 152 85.5
FAN26G1575 Fragaria x ananassa HOM05D000141 ORTHO05D004993 4.8e-66 254.6 152 85.5
ClCG01G018390 Citrullus lanatus HOM05D000141 ORTHO05D004993 6.3e-66 254.2 150 88.0
Manes.12G126900 Manihot esculenta HOM05D000141 ORTHO05D004993 8.2e-66 253.8 151 87.4
CsaV3_6G045040 Cucumis sativus L. HOM05D000141 ORTHO05D004993 1.1e-65 253.4 150 87.3
TAR376G1001 Trochodendron aralioides HOM05D000141 ORTHO05D004993 1.1e-65 253.4 152 86.2
COL.COLO4_27349 Corchorus olitorius HOM05D000141 ORTHO05D004993 1.8e-65 252.7 154 87.7
Sabra07G0008100 Salix brachista HOM05D000141 ORTHO05D004993 1.8e-65 252.7 152 85.5
THA.LOC104801691 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 2.4e-65 252.3 152 86.2
Sed0001145 Sechium edule HOM05D000141 ORTHO05D004993 4.1e-65 251.5 150 86.7
CANSAT54G0158 Cannabis sativa HOM05D000141 ORTHO05D004993 5.3e-65 251.1 152 84.2
Gohir.A11G206600 Gossypium hirsutum HOM05D000141 ORTHO05D004993 5.3e-65 251.1 152 84.2
Gorai.007G233100 Gossypium raimondii HOM05D000141 ORTHO05D004993 9.0e-65 250.4 152 84.2
Aqoxy6G01438 Aquilegia oxysepala HOM05D000141 ORTHO05D004993 1.5e-64 249.6 152 84.9
GSVIVG01006736001 Vitis vinifera HOM05D000141 ORTHO05D004993 2.0e-64 249.2 151 85.4
VMungo0251G3517 Vigna mungo HOM05D000141 ORTHO05D004993 7.6e-64 247.3 152 82.9
MD00G1019700 Malus domestica HOM05D000141 ORTHO05D004993 1.0e-63 246.9 153 85.6
MSTRG.15690 Avicennia marina HOM05D000141 ORTHO05D004993 1.3e-63 246.5 152 84.2
Phvul.003G289200 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 1.3e-63 246.5 152 82.9
DCAR_003449 Daucus carota HOM05D000141 ORTHO05D004993 2.2e-63 245.7 151 83.4
Glyma.18G146600 Glycine max HOM05D000141 ORTHO05D004993 2.9e-63 245.4 152 82.2
PSO541G3987 Papaver somniferum HOM05D000141 ORTHO05D004993 2.9e-63 245.4 151 84.8
PSO675G5554 Papaver somniferum HOM05D000141 ORTHO05D004993 2.9e-63 245.4 151 84.8
Glyma.01G023600 Glycine max HOM05D000141 ORTHO05D004993 3.8e-63 245.0 152 80.3
Glyma.08G279800 Glycine max HOM05D000141 ORTHO05D004993 3.8e-63 245.0 152 81.6
AUR62017965 Chenopodium quinoa HOM05D000141 ORTHO05D004993 6.5e-63 244.2 150 84.0
Medtr8g471180 Medicago truncatula HOM05D000141 ORTHO05D004993 6.5e-63 244.2 152 80.9
Phvul.002G147700 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 8.5e-63 243.8 152 80.9
PGR031G3531 Punica granatum HOM05D000141 ORTHO05D004993 1.4e-62 243.0 150 83.3
TPR.G14602 Trifolium pratense HOM05D000141 ORTHO05D004993 3.2e-62 241.9 152 80.9
Lj4g0027101 Lotus japonicus HOM05D000141 ORTHO05D004993 4.2e-62 241.5 152 81.6
VMungo1215G0183 Vigna mungo HOM05D000141 ORTHO05D004993 5.5e-62 241.1 152 80.3
AUR62003657 Chenopodium quinoa HOM05D000141 ORTHO05D004993 9.3e-62 240.4 150 82.7
Cfa006890 Carpinus fangiana HOM05D000141 ORTHO05D004993 1.6e-61 239.6 134 91.8
Hund14088 Selenicereus undatus HOM05D000141 ORTHO05D004993 1.6e-61 239.6 148 85.8
Glyma.02G041400 Glycine max HOM05D000141 ORTHO05D004993 2.1e-61 239.2 152 78.9
Psat4g119320 Pisum sativum HOM05D000141 ORTHO05D004993 2.7e-61 238.8 152 79.6
SGA_v2.0_scaffold45G17236 Striga asiatica HOM05D000141 ORTHO05D004993 2.7e-61 238.8 152 82.9
Solyc11g010560.3 Solanum lycopersicum HOM05D000141 ORTHO05D004993 6.1e-61 237.7 151 79.5
Ca_22599_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004993 7.9e-61 237.3 151 78.8
CAN.G1344.1 Capsicum annuum HOM05D000141 ORTHO05D004993 1.0e-60 236.9 148 81.1
SalBow5G1291 Salvia bowleyana HOM05D000141 ORTHO05D004993 1.0e-60 236.9 152 82.2
MD15G1313600 Malus domestica HOM05D000141 ORTHO05D004993 1.8e-60 236.1 151 80.8
Sopen11g005360 Solanum pennellii HOM05D000141 ORTHO05D004993 1.8e-60 236.1 151 79.5
Eucgr.I00545 Eucalyptus grandis HOM05D000141 ORTHO05D004993 2.3e-60 235.7 150 84.7
MBI02_g32604_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004993 2.3e-60 235.7 151 79.5
Ah.03g140120 Amaranthus hybridus HOM05D000141 ORTHO05D004993 3.9e-60 235.0 152 80.3
HanXRQChr13g0405071 Helianthus annuus HOM05D000141 ORTHO05D004993 3.9e-60 235.0 152 83.6
AL8G43040 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 5.1e-60 234.6 152 82.2
Migut.K00793 Erythranthe guttata HOM05D000141 ORTHO05D004993 1.5e-59 233.0 153 80.4
AT5G65460 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 1.9e-59 232.6 152 81.6
EL10Ac6g15211 Beta vulgaris HOM05D000141 ORTHO05D004993 1.9e-59 232.6 152 80.3
DCAR_016619 Daucus carota HOM05D000141 ORTHO05D004993 2.5e-59 232.3 151 80.8
Lalb_Chr05g0216301 Lupinus albus HOM05D000141 ORTHO05D004993 2.5e-59 232.3 152 77.6
Sp2g28540 Schrenkiella parvula HOM05D000141 ORTHO05D004993 7.4e-59 230.7 152 80.9
Aa31LG1G16550 Aethionema arabicum HOM05D000141 ORTHO05D004993 1.6e-58 229.6 152 80.3
Lalb_Chr05g0228501 Lupinus albus HOM05D000141 ORTHO05D004993 1.6e-58 229.6 152 77.0
arahy.Tifrunner.gnm1.ann1.46GERB Arachis hypogaea HOM05D000141 ORTHO05D004993 8.2e-58 227.3 143 79.0
A06p32290 Brassica napus HOM05D000141 ORTHO05D004993 8.2e-58 227.3 149 81.9
BraA06t26155Z Brassica rapa HOM05D000141 ORTHO05D004993 8.2e-58 227.3 149 81.9
C03p60620 Brassica napus HOM05D000141 ORTHO05D004993 1.1e-57 226.9 149 81.9
BolC3t18317H Brassica oleracea HOM05D000141 ORTHO05D004993 1.1e-57 226.9 149 81.9
Carub.0008s2631 Capsella rubella HOM05D000141 ORTHO05D004993 1.1e-57 226.9 152 78.3
arahy.Tifrunner.gnm1.ann1.52WN7P Arachis hypogaea HOM05D000141 ORTHO05D004993 1.4e-57 226.5 152 78.3
arahy.Tifrunner.gnm1.ann1.5SKZ26 Arachis hypogaea HOM05D000141 ORTHO05D004993 1.4e-57 226.5 152 78.3
arahy.Tifrunner.gnm1.ann1.029WE6 Arachis hypogaea HOM05D000141 ORTHO05D004993 6.9e-57 224.2 143 78.3
Lsat_1_v5_gn_3_61481 Lactuca sativa HOM05D000141 ORTHO05D004993 1.2e-56 223.4 152 80.3
THA.LOC104819293 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 1.5e-56 223.0 149 81.2
CARHR279440 Cardamine hirsuta HOM05D000141 ORTHO05D004993 4.5e-56 221.5 152 78.9
CDE10G0963 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 3.8e-55 218.4 150 73.3
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 8.5e-55 217.2 142 82.4
Thhalv10012459m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 7.2e-54 214.2 143 79.0
CDE10G0717 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 9.4e-54 213.8 150 71.3
AL6G20990 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 3.6e-53 211.8 142 79.6
Carub.0006s0895 Capsella rubella HOM05D000141 ORTHO05D004993 7.9e-53 210.7 142 78.2
Sp6g32970 Schrenkiella parvula HOM05D000141 ORTHO05D004993 7.9e-53 210.7 143 78.3
AT5G10470 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 2.3e-52 209.1 142 78.9
BcaB01g05532 Brassica carinata HOM05D000141 ORTHO05D004993 9.7e-51 203.8 143 74.8
A03p04560 Brassica napus HOM05D000141 ORTHO05D004993 9.7e-51 203.8 143 74.8
C03p05120 Brassica napus HOM05D000141 ORTHO05D004993 9.7e-51 203.8 143 74.8
BcaB01g06283 Brassica carinata HOM05D000141 ORTHO05D004993 1.7e-50 203.0 143 74.8
BraA03t09798Z Brassica rapa HOM05D000141 ORTHO05D004993 2.2e-50 202.6 143 74.1
CARHR202820 Cardamine hirsuta HOM05D000141 ORTHO05D004993 3.7e-50 201.8 142 75.4
ATR0665G420 Amborella trichopoda HOM05D000141 ORTHO05D004993 1.1e-49 200.3 150 71.3
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 3.1e-49 198.7 135 78.5
Os06g0217600 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004993 1.2e-48 196.8 138 72.5
Zm00001eb372980 Zea mays HOM05D000141 ORTHO05D004993 1.2e-48 196.8 124 79.0
Aa31LG3G16690 Aethionema arabicum HOM05D000141 ORTHO05D004993 3.8e-47 191.8 146 70.5
unitig_748.g7037 Utricularia gibba HOM05D000141 ORTHO05D004993 1.9e-46 189.5 137 69.3
HPP92_005965 Vanilla planifolia HOM05D000141 ORTHO05D004993 9.4e-46 187.2 134 72.4
Eucgr.I00476 Eucalyptus grandis HOM05D000141 ORTHO05D004993 5.7e-43 177.9 150 70.0
QL10p045557 Quercus lobata HOM05D000141 ORTHO05D004993 1.7e-39 166.4 94 88.3
QL10p044591 Quercus lobata HOM05D006593 ORTHO05D004993 8.5e-39 164.1 94 87.2
SHI12213 Sapria himalayana HOM05D000141 ORTHO05D004993 8.5e-39 164.1 129 69.0
SEGI_00023 Sequoiadendron giganteum HOM05D000141 ORTHO05D004993 1.6e-37 159.8 122 64.8
Lsat_1_v5_gn_1_89581 Lactuca sativa HOM05D000041 ORTHO05D000452 8.0e-37 157.5 116 69.0
CSS0023880 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 1.8e-36 156.4 95 87.4
Pp3c4_24010 Physcomitrium patens HOM05D000141 ORTHO05D004993 3.0e-36 155.6 141 54.6
Mapoly0022s0156 Marchantia polymorpha HOM05D000141 ORTHO05D004993 8.2e-34 147.5 133 56.4
Pp3c3_10920 Physcomitrium patens HOM05D000141 ORTHO05D004993 9.1e-33 144.1 139 52.5
Pp3c3_10921 Physcomitrium patens HOM05D000141 ORTHO05D004993 9.1e-33 144.1 139 52.5
SMO169G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 1.2e-29 133.7 133 54.9
SMO337G0058 Selaginella moellendorffii HOM05D000141 ORTHO05D004993 6.1e-29 131.3 128 54.7
Lj2C535G3 Lonicera japonica HOM05D000141 ORTHO05D004993 1.7e-23 113.2 73 78.1
AagrBONN_evm.TU.Sc2ySwM_228.4409 Anthoceros agrestis HOM05D000141 ORTHO05D004993 1.9e-22 109.8 119 50.4
Lj2A535G40 Lonicera japonica HOM05D000141 ORTHO05D004993 5.5e-22 108.2 60 93.3
unitig_0.g1718 Utricularia gibba HOM05D000141 ORTHO05D004993 9.5e-22 107.5 67 80.6
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 2.7e-16 89.4 76 68.4
PGSC0003DMG400031414 Solanum tuberosum HOM05D000141 ORTHO05D004993 6.6e-15 84.7 68 67.6
CAN.G1724.1 Capsicum annuum HOM05D000141 ORTHO05D004993 1.1e-14 84.0 54 77.8
CBR_g78819 Chara braunii HOM05D000141 ORTHO05D004993 6.6e-07 58.2 148 31.1
C03p78970 Brassica napus HOM05D000141 ORTHO05D017607 1.5e-06 57.0 31 83.9


User provided reference genes

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