Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 6.5e-54 213.8 106 100.0
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 3.6e-36 154.8 127 63.8
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.6e-31 139.4 102 65.7
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 7.8e-31 137.1 103 64.1
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 5.0e-30 134.4 98 66.3
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.8e-28 128.6 98 63.3
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.8e-27 125.9 105 59.0
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.2e-26 123.2 102 58.8
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 5.8e-26 120.9 97 61.9
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 1.3e-25 119.8 102 57.8
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 1.7e-25 119.4 88 68.2
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.7e-25 119.4 103 60.2
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 8.3e-25 117.1 102 56.9
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.1e-24 116.7 102 56.9
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.4e-24 116.3 96 60.4
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.9e-24 115.9 103 58.3
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.9e-24 115.9 89 60.7
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 2.4e-24 115.5 102 55.9
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 3.2e-24 115.2 102 54.9
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.2e-24 115.2 95 60.0
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 3.2e-24 115.2 105 56.2
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 4.1e-24 114.8 89 59.6
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 9.2e-24 113.6 98 57.1
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.2e-23 113.2 93 61.3
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 1.2e-23 113.2 102 55.9
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.6e-23 112.8 103 55.3
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 3.5e-23 111.7 102 53.9
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 3.5e-23 111.7 104 58.7
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 7.8e-23 110.5 88 62.5
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 2.3e-22 109.0 95 57.9
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 2.3e-22 109.0 88 61.4
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 3.3e-21 105.1 94 54.3
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 7.3e-21 104.0 106 51.9
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 7.3e-21 104.0 98 57.1
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 1.2e-20 103.2 95 56.8
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.2e-20 103.2 98 57.1
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.1e-20 102.4 97 54.6
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 6.2e-20 100.9 94 57.4
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 8.9e-19 97.1 87 52.9
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.5e-18 96.3 97 51.5
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 2.6e-18 95.5 105 45.7
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 2.6e-18 95.5 95 49.5
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 3.4e-18 95.1 98 52.0
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 3.4e-18 95.1 89 57.3
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.4e-18 94.7 87 52.9
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 5.8e-18 94.4 87 51.7
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 9.8e-18 93.6 100 47.0
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.2e-17 92.4 96 46.9
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 6.4e-17 90.9 102 47.1
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 6.4e-17 90.9 96 53.1
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 6.4e-17 90.9 96 53.1
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.3e-17 90.5 77 61.0
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.1e-16 90.1 91 56.0
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.4e-16 89.7 90 50.0
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.9e-16 89.4 101 48.5
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 1.9e-16 89.4 81 50.6
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.1e-16 88.2 76 59.2
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.1e-16 88.2 102 45.1
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 9.2e-16 87.0 101 45.5
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 9.2e-16 87.0 102 45.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 9.2e-16 87.0 99 52.5
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.2e-15 86.7 84 46.4
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 3.5e-15 85.1 87 51.7
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 6.0e-15 84.3 97 46.4
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 6.0e-15 84.3 85 51.8
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.0e-14 83.6 96 49.0
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.7e-14 82.8 87 50.6
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 6.6e-14 80.9 78 51.3
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 1.1e-13 80.1 94 45.7
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.5e-13 79.7 102 42.2
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.5e-13 79.7 71 50.7
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 2.5e-13 79.0 97 43.3
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.3e-13 78.6 96 47.9
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 4.3e-13 78.2 102 48.0
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 7.3e-13 77.4 61 55.7
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 9.5e-13 77.0 74 48.6
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 1.6e-12 76.3 104 43.3
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 2.1e-12 75.9 100 40.0
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 2.8e-12 75.5 80 48.8
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.8e-12 75.5 81 49.4
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 3.6e-12 75.1 78 46.2
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 4.7e-12 74.7 93 45.2
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 4.7e-12 74.7 76 44.7
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.1e-11 73.6 102 40.2
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.0e-10 69.3 79 48.1
Zm00001eb033620 Zea mays HOM05D031404 ORTHO05D007801 2.2e-09 65.9 79 40.5
Zm00001eb199190 Zea mays HOM05D031404 ORTHO05D007801 3.8e-09 65.1 79 41.8
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 8.4e-09 63.9 93 43.0
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 3.2e-08 62.0 148 31.8
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-08 61.2 71 45.1
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 1.2e-07 60.1 81 39.5
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 2.7e-07 58.9 71 38.0
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 4.6e-07 58.2 74 36.5
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 4.6e-07 58.2 74 36.5
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 1.0e-06 57.0 71 43.7
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 1.3e-06 56.6 63 46.0
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 6.6e-06 54.3 85 32.9
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 6.6e-06 54.3 85 32.9
Cpa.g.sc3.212 Carica papaya HOM05D007643 ORTHO05D007801 8.6e-06 53.9 59 47.5


User provided reference genes

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