Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36816 Davidia involucrata HOM05D000707 ORTHO05D026748 3.5e-61 238.0 114 100.0
CAN.G16.9 Capsicum annuum HOM05D000707 ORTHO05D004608 1.7e-28 129.4 106 58.5
Gohir.A03G151100 Gossypium hirsutum HOM05D000707 ORTHO05D004608 1.2e-24 116.7 88 63.6
Gorai.005G195800 Gossypium raimondii HOM05D000707 ORTHO05D004608 1.2e-24 116.7 88 63.6
Gohir.D02G174100 Gossypium hirsutum HOM05D000707 ORTHO05D004608 7.6e-24 114.0 88 62.5
Hund28219 Selenicereus undatus HOM05D000707 ORTHO05D004608 4.0e-17 91.7 83 51.8
Hund28224 Selenicereus undatus HOM05D000707 ORTHO05D004608 4.0e-17 91.7 83 51.8
GSVIVG01010991001 Vitis vinifera HOM05D000707 ORTHO05D008008 1.5e-16 89.7 72 56.9
Sabra16G0206200 Salix brachista HOM05D000707 ORTHO05D004608 2.6e-16 89.0 81 54.3
FvH4_7g05191 Fragaria vesca HOM05D000707 ORTHO05D026748 5.8e-16 87.8 53 69.8
Hma1.2p1_0672F.1_g201080 Hydrangea macrophylla HOM05D000707 ORTHO05D004608 2.9e-15 85.5 57 70.2
Manes.11G079100 Manihot esculenta HOM05D000707 ORTHO05D004608 9.3e-14 80.5 78 57.7
TAR626G0596 Trochodendron aralioides HOM05D000707 ORTHO05D001462 3.0e-12 75.5 80 38.8
BcaC05g26620 Brassica carinata HOM05D000707 ORTHO05D004608 3.9e-12 75.1 76 50.0
Cfa014200 Carpinus fangiana HOM05D000707 ORTHO05D001462 6.7e-12 74.3 82 35.4
Lj8C138T2 Lonicera japonica HOM05D000707 ORTHO05D001462 1.5e-11 73.2 72 47.2
DCAR_019663 Daucus carota HOM05D000707 ORTHO05D001462 1.9e-11 72.8 82 37.8
Ca_08115_v3 Cicer arietinum L. HOM05D000707 ORTHO05D004608 4.3e-11 71.6 78 46.2
DCAR_012741 Daucus carota HOM05D000707 ORTHO05D001462 9.6e-11 70.5 82 41.5
DCAR_021082 Daucus carota HOM05D000707 ORTHO05D001462 9.6e-11 70.5 82 36.6
VMungo0540G1995 Vigna mungo HOM05D000707 ORTHO05D001462 2.1e-10 69.3 82 37.8
Dinv05268 Davidia involucrata HOM05D000707 ORTHO05D004608 3.6e-10 68.6 105 44.8
Duzib052G0302 Durio zibethinus HOM05D000707 ORTHO05D004608 3.6e-10 68.6 97 44.3
Duzib052G0627 Durio zibethinus HOM05D000707 ORTHO05D004608 3.6e-10 68.6 97 44.3
Actinidia20604 Actinidia chinensis HOM05D000707 ORTHO05D001462 6.2e-10 67.8 78 35.9
Actinidia20618 Actinidia chinensis HOM05D000707 ORTHO05D001462 6.2e-10 67.8 78 35.9
Nitab4.5_0004941g0040 Nicotiana tabacum HOM05D000707 ORTHO05D001462 1.8e-09 66.2 71 36.6
Actinidia24274 Actinidia chinensis HOM05D000707 ORTHO05D001462 4.0e-09 65.1 81 34.6
Ah.01g014580 Amaranthus hybridus HOM05D000707 ORTHO05D001462 4.0e-09 65.1 85 31.8
Cc05_g05160 Coffea canephora HOM05D000707 ORTHO05D001462 4.0e-09 65.1 86 39.5
vmacro12230 Vaccinium macrocarpon HOM05D000707 ORTHO05D001462 4.0e-09 65.1 75 37.3
HPP92_011757 Vanilla planifolia HOM05D000578 ORTHO05D004608 4.0e-09 65.1 78 43.6
CDE02G1405 Ceratophyllum demersum HOM05D000707 ORTHO05D004608 5.3e-09 64.7 45 66.7
Aqoxy5G02910 Aquilegia oxysepala HOM05D002926 ORTHO05D026748 6.9e-09 64.3 42 61.9
Rhsim06G0157800 Rhododendron simsii HOM05D000707 ORTHO05D001462 6.9e-09 64.3 77 37.7
DCAR_008751 Daucus carota HOM05D000707 ORTHO05D001462 9.0e-09 63.9 75 41.3
Duzib248G0015 Durio zibethinus HOM05D000707 ORTHO05D004608 9.0e-09 63.9 105 43.8
SalBow8G3360 Salvia bowleyana HOM05D000707 ORTHO05D001462 9.0e-09 63.9 93 31.2
Phvul.007G033100 Phaseolus vulgaris HOM05D000707 ORTHO05D008764 1.2e-08 63.5 96 34.4
Phvul.001G087300 Phaseolus vulgaris HOM05D000707 ORTHO05D004608 2.0e-08 62.8 74 47.3
Solyc04g007470.3 Solanum lycopersicum HOM05D000707 ORTHO05D008764 3.4e-08 62.0 91 31.9
Sopen04g002550 Solanum pennellii HOM05D000707 ORTHO05D008764 3.4e-08 62.0 91 31.9
Phvul.005G113300 Phaseolus vulgaris HOM05D000707 ORTHO05D001462 4.5e-08 61.6 82 35.4
PGSC0003DMG400005997 Solanum tuberosum HOM05D000707 ORTHO05D008764 4.5e-08 61.6 91 31.9
Hund25494 Selenicereus undatus HOM05D000707 ORTHO05D004608 5.8e-08 61.2 82 41.5
TAR627G0827 Trochodendron aralioides HOM05D000707 ORTHO05D001462 7.6e-08 60.8 78 39.7
TAR636G2096 Trochodendron aralioides HOM05D000186 ORTHO05D001471 7.6e-08 60.8 78 39.7
VMungo0720G0641 Vigna mungo HOM05D000707 ORTHO05D008764 1.3e-07 60.1 96 32.3
CARHR221980 Cardamine hirsuta HOM05D000707 ORTHO05D001462 1.7e-07 59.7 83 34.9
Manes.13G073566 Manihot esculenta HOM05D000707 ORTHO05D001462 1.7e-07 59.7 73 37.0
DCAR_002791 Daucus carota HOM05D000707 ORTHO05D008008 2.9e-07 58.9 72 40.3
Psat3g094880 Pisum sativum HOM05D000707 ORTHO05D004608 3.8e-07 58.5 80 40.0
TPR.G5748 Trifolium pratense HOM05D000707 ORTHO05D004608 3.8e-07 58.5 80 37.5
Medtr7g083540 Medicago truncatula HOM05D000707 ORTHO05D004608 4.9e-07 58.2 80 37.5
Nitab4.5_0003877g0010 Nicotiana tabacum HOM05D000707 ORTHO05D008764 4.9e-07 58.2 91 30.8
Manes.14G108200 Manihot esculenta HOM05D000707 ORTHO05D008764 6.4e-07 57.8 81 30.9
Nitab4.5_0000057g0010 Nicotiana tabacum HOM05D000707 ORTHO05D008764 6.4e-07 57.8 91 30.8
Peaxi162Scf00564g00613 Petunia axillaris HOM05D000707 ORTHO05D008764 8.4e-07 57.4 92 29.3
HanXRQChr08g0213211 Helianthus annuus HOM05D000707 ORTHO05D008764 1.1e-06 57.0 73 35.6
RcHm_v2.0_Chr2g0160151 Rosa chinensis HOM05D000707 ORTHO05D001462 1.1e-06 57.0 81 29.6
Hma1.2p1_0439F.1_g153160 Hydrangea macrophylla HOM05D000707 ORTHO05D001462 1.9e-06 56.2 76 34.2
Atru.chr6.3139 Acer truncatum HOM05D000707 ORTHO05D001462 2.4e-06 55.8 80 35.0
Nn7g36516 Nelumbo nucifera HOM05D000707 ORTHO05D026748 2.4e-06 55.8 51 52.9
SEGI_07789 Sequoiadendron giganteum HOM05D000707 ORTHO05D004608 2.4e-06 55.8 83 31.3
MSTRG.2209 Avicennia marina HOM05D000707 ORTHO05D008764 3.2e-06 55.5 81 29.6
Duzib147G1385 Durio zibethinus HOM05D000707 ORTHO05D004608 3.2e-06 55.5 109 31.2
MD13G1125800 Malus domestica HOM05D000707 ORTHO05D004608 3.2e-06 55.5 97 41.2
Peaxi162Scf00007g01220 Petunia axillaris HOM05D000707 ORTHO05D001462 3.2e-06 55.5 75 37.3
Ah.03g135770 Amaranthus hybridus HOM05D000707 ORTHO05D004608 5.5e-06 54.7 73 42.5
Sed0005852 Sechium edule HOM05D000707 ORTHO05D004608 5.5e-06 54.7 96 41.7
FvH4_6g43570 Fragaria vesca HOM05D000707 ORTHO05D001462 7.1e-06 54.3 74 31.1
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 7.1e-06 54.3 82 30.5
FAN14G0208 Fragaria x ananassa HOM05D000707 ORTHO05D001462 7.1e-06 54.3 74 31.1
Hma1.2p1_0459F.1_g157250 Hydrangea macrophylla HOM05D000707 ORTHO05D004608 7.1e-06 54.3 105 39.0
Lj1g0021723 Lotus japonicus HOM05D000707 ORTHO05D004608 7.1e-06 54.3 74 41.9
Sabra17G0026300 Salix brachista HOM05D000707 ORTHO05D001462 7.1e-06 54.3 85 31.8
GSVIVG01030628001 Vitis vinifera HOM05D000707 ORTHO05D001462 7.1e-06 54.3 86 32.6
Potri.017G039301 Populus trichocarpa HOM05D000707 ORTHO05D001462 9.3e-06 53.9 85 31.8
Rhsim04G0056700 Rhododendron simsii HOM05D000707 ORTHO05D001462 9.3e-06 53.9 69 40.6


User provided reference genes

Program Settings