Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 0.0e+00 1243.0 642 100.0
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.2e-129 468.0 711 45.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.6e-126 457.6 623 47.8
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.6e-116 422.5 637 46.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 4.6e-110 402.9 638 43.4
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.0e-101 375.2 628 42.4
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 6.2e-99 365.9 563 45.1
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.9e-96 357.1 626 42.0
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.4e-95 354.8 672 39.3
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.0e-93 348.6 645 40.5
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 4.0e-90 336.7 645 39.7
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.0e-90 336.7 701 36.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.0e-89 334.3 626 38.8
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.8e-89 332.8 719 36.3
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.9e-88 330.5 611 39.1
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 6.5e-88 329.3 638 37.3
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.4e-87 328.2 641 36.0
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 8.7e-85 318.9 643 35.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.1e-84 318.5 697 37.2
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.1e-82 312.0 611 37.6
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.5e-81 306.6 667 35.7
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 5.0e-80 303.1 608 36.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.6e-78 298.1 779 34.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 3.0e-77 293.9 637 36.3
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.3e-76 290.4 676 35.9
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.3e-76 290.4 627 36.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.3e-76 290.0 639 36.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.3e-76 290.0 630 36.5
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 9.7e-76 288.9 630 36.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.2e-75 287.7 649 35.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.2e-75 287.7 656 35.4
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.8e-75 287.3 639 35.2
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.3e-75 286.2 620 35.8
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.4e-74 285.0 536 39.6
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.4e-74 285.0 609 36.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.4e-74 285.0 670 34.5
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.8e-74 284.6 465 41.9
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.8e-74 284.6 637 35.5
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.4e-74 284.3 488 41.0
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 6.9e-74 282.7 661 35.9
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.9e-73 279.6 636 35.7
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.7e-70 270.8 655 34.5
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-69 267.7 632 34.3
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 3.9e-69 266.9 625 33.3
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.2e-67 261.2 605 33.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.1e-66 256.9 476 40.1
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 4.1e-66 256.9 658 32.7
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 5.9e-65 253.1 651 34.7
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.0e-64 250.0 794 30.0
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 8.0e-62 242.7 793 29.4
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.3e-58 229.9 654 33.0
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.6e-57 228.4 814 29.0
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.7e-56 224.9 819 28.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.3e-53 214.5 326 43.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 3.3e-52 210.7 637 32.3
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 7.5e-52 209.5 662 30.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 2.2e-51 208.0 385 38.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 8.2e-51 206.1 646 31.7
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.5e-49 200.3 661 31.9
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.5e-49 200.3 644 30.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 5.5e-47 193.4 620 29.7
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.8e-45 188.3 779 28.1
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.3e-45 188.0 435 35.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.5e-44 185.3 636 30.0
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 2.6e-44 184.5 554 30.5
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.2e-43 181.4 616 27.8
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.8e-42 178.3 147 64.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 5.4e-42 176.8 414 36.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.2e-41 175.6 347 40.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.7e-40 171.8 208 50.5
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.3e-40 171.4 345 39.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 3.8e-40 170.6 583 29.5
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.6e-40 169.5 147 61.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.6e-40 169.5 147 61.9
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-39 169.1 257 44.7
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.5e-39 168.7 304 38.2
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.4e-37 162.2 187 49.7
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 1.8e-37 161.8 371 34.5
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 8.9e-37 159.5 146 55.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.4e-36 157.5 302 38.1
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.2e-35 154.8 337 35.3
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.1e-34 151.0 409 30.8
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 7.0e-34 149.8 247 40.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.3e-32 145.6 141 51.8
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.9e-32 144.4 605 26.1
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 5.0e-32 143.7 611 27.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 8.6e-32 142.9 606 26.7
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.1e-31 142.5 603 27.7
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.3e-31 141.0 617 27.6
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 5.6e-31 140.2 700 24.6
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 6.1e-30 136.7 360 32.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 4.4e-28 130.6 344 32.8
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.4e-28 130.6 607 25.4
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 2.2e-27 128.3 346 32.1
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.7e-27 127.5 636 26.6
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 6.4e-27 126.7 215 37.2
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.1e-26 125.9 631 24.9
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.1e-23 115.9 343 29.7
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.3e-23 114.0 251 34.7
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.2e-19 101.7 128 38.3
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 8.3e-19 99.8 64 68.8
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.0e-18 96.7 164 33.5
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 2.7e-17 94.7 289 30.8
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.0e-16 92.8 176 34.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.0e-16 92.8 176 34.7
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 1.3e-16 92.4 83 60.2
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.7e-16 92.0 128 42.2
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.7e-16 92.0 143 35.0
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 8.6e-16 89.7 106 44.3
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.5e-15 88.2 254 29.1
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 3.6e-14 84.3 128 35.2
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 8.9e-13 79.7 644 22.7
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.9e-11 73.9 245 31.4
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 3.0e-08 64.7 388 25.5
PGSC0003DMG402013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.9e-07 62.0 78 46.2
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 7.3e-07 60.1 116 32.8
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 8.1e-06 56.6 257 24.9


User provided reference genes

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