Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 2.4e-262 908.3 451 100.0
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 7.3e-187 657.5 497 68.4
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 6.8e-185 651.0 497 68.2
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.5e-176 623.2 498 66.7
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 5.2e-169 598.2 489 63.8
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 4.4e-168 595.1 487 63.0
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 9.2e-166 587.4 498 62.0
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 6.4e-159 564.7 498 58.2
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 7.1e-158 561.2 492 58.3
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 1.6e-157 560.1 498 58.6
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 2.1e-157 559.7 498 59.6
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 2.3e-156 556.2 497 57.5
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 5.6e-155 551.6 501 59.1
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 2.4e-153 546.2 493 57.6
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.1e-153 545.8 500 60.2
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 3.1e-153 545.8 493 58.0
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 5.3e-153 545.0 498 57.6
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 2.0e-152 543.1 493 59.0
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 2.9e-151 539.3 493 57.8
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 6.4e-151 538.1 506 56.3
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 2.1e-149 533.1 501 56.7
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.1e-149 533.1 481 57.8
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 6.0e-149 531.6 419 62.8
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 7.9e-149 531.2 481 57.6
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.0e-148 530.8 497 56.3
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 5.1e-148 528.5 494 55.5
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 1.9e-147 526.6 495 57.8
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 9.6e-147 524.2 500 55.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.3e-146 523.9 503 56.7
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 3.7e-146 522.3 428 64.5
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 8.1e-146 521.2 500 55.4
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 6.4e-143 511.5 493 56.8
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 4.2e-142 508.8 480 56.7
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 3.5e-141 505.8 479 55.3
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 6.7e-140 501.5 496 54.0
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 1.5e-139 500.4 497 54.1
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 3.3e-139 499.2 494 54.0
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 9.6e-139 497.7 501 52.7
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 3.7e-138 495.7 501 53.5
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 4.5e-136 488.8 491 52.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 3.8e-135 485.7 511 51.7
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.4e-134 483.8 496 52.0
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 2.5e-134 483.0 492 53.7
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 3.9e-132 475.7 425 59.8
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 3.4e-128 462.6 497 50.5
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 4.2e-126 455.7 499 51.9
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.6e-125 453.8 493 50.7
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 3.6e-125 452.6 439 54.0
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.8e-124 450.3 500 49.4
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 2.3e-124 449.9 500 49.0
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 1.5e-123 447.2 499 52.5
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 9.7e-123 444.5 493 49.5
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-122 444.1 405 57.8
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.7e-122 443.7 405 57.3
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 2.8e-122 443.0 496 49.0
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 1.8e-121 440.3 505 47.1
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.5e-120 437.2 502 47.0
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 2.6e-120 436.4 502 47.0
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 2.6e-120 436.4 502 47.0
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 7.7e-120 434.9 494 50.0
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 3.8e-119 432.6 502 46.8
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 4.2e-118 429.1 505 46.5
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 1.8e-116 423.7 491 48.3
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 2.8e-114 416.4 410 55.1
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 2.4e-113 413.3 499 49.5
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 4.1e-113 412.5 411 52.8
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.0e-112 410.2 410 52.9
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 2.6e-112 409.8 395 55.4
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-103 380.9 312 62.5
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 8.3e-98 361.7 414 51.2
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 4.5e-96 355.9 503 41.7
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.1e-94 351.3 437 46.9
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 7.2e-94 348.6 242 72.7
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 2.3e-87 327.0 515 40.2
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.8e-84 317.4 358 49.2
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 5.8e-75 285.8 444 40.8
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 3.2e-73 280.0 557 35.2
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 7.3e-70 268.9 450 37.8
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 1.4e-41 174.9 118 77.1
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 7.8e-40 169.1 469 27.3
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.2e-34 151.0 159 50.9
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 1.7e-26 124.8 439 25.7
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 2.0e-19 101.3 224 34.8
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 2.5e-17 94.4 434 27.0


User provided reference genes

Program Settings