Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 1.3e-45 186.0 93 100.0
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 1.4e-15 86.3 51 78.4
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 1.2e-14 83.2 51 78.4
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 3.4e-14 81.6 66 66.7
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 2.9e-13 78.6 51 76.5
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 1.1e-12 76.6 54 72.2
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 1.9e-12 75.9 51 72.5
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.4e-12 75.5 51 68.6
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 4.2e-12 74.7 51 68.6
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 5.4e-12 74.3 51 70.6
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 5.4e-12 74.3 52 73.1
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 1.2e-11 73.2 51 68.6
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 1.6e-11 72.8 51 66.7
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 1.6e-11 72.8 51 66.7
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.6e-11 72.8 51 66.7
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.6e-11 72.8 51 66.7
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 1.6e-11 72.8 51 66.7
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 1.6e-11 72.8 54 66.7
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 2.7e-11 72.0 51 66.7
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 2.7e-11 72.0 51 66.7
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 3.5e-11 71.6 51 64.7
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 4.6e-11 71.2 51 64.7
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 4.6e-11 71.2 51 68.6
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.0e-10 70.1 51 66.7
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.0e-10 70.1 51 66.7
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 1.0e-10 70.1 51 66.7
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 1.3e-10 69.7 51 62.7
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.3e-10 69.7 51 64.7
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 1.7e-10 69.3 53 58.5
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 2.3e-10 68.9 47 68.1
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 3.0e-10 68.6 54 63.0
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 3.0e-10 68.6 51 64.7
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 3.9e-10 68.2 47 66.0
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 3.9e-10 68.2 51 58.8
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 5.1e-10 67.8 54 61.1
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 8.7e-10 67.0 51 58.8
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 1.5e-09 66.2 54 61.1
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 1.5e-09 66.2 54 61.1
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 1.9e-09 65.9 51 58.8
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 3.3e-09 65.1 46 69.6
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 3.3e-09 65.1 51 62.7
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 3.3e-09 65.1 41 73.2
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 3.3e-09 65.1 51 64.7
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 4.3e-09 64.7 51 58.8
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 4.3e-09 64.7 51 58.8
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 5.6e-09 64.3 54 57.4
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 5.6e-09 64.3 51 62.7
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 5.6e-09 64.3 54 55.6
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 1.3e-08 63.2 51 62.7
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 1.3e-08 63.2 51 56.9
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 1.3e-08 63.2 51 60.8
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 1.3e-08 63.2 51 56.9
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 1.6e-08 62.8 51 60.8
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 2.1e-08 62.4 51 56.9
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.8e-08 62.0 41 75.6
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 2.8e-08 62.0 51 56.9
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 3.6e-08 61.6 51 54.9
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 6.2e-08 60.8 51 56.9
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 8.1e-08 60.5 47 57.4
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 8.1e-08 60.5 51 54.9
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 8.1e-08 60.5 50 56.0
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 1.1e-07 60.1 54 50.0
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 1.4e-07 59.7 39 71.8
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 1.4e-07 59.7 47 59.6
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 1.8e-07 59.3 51 52.9
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 2.4e-07 58.9 54 50.0
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 3.1e-07 58.5 51 56.9
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 4.0e-07 58.2 51 52.9
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 4.0e-07 58.2 47 57.4
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 6.9e-07 57.4 50 54.0
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 9.0e-07 57.0 51 52.9
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 9.0e-07 57.0 52 53.8
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 1.2e-06 56.6 52 53.8
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 1.5e-06 56.2 51 54.9
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 1.5e-06 56.2 41 61.0
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 2.0e-06 55.8 47 59.6
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 2.6e-06 55.5 42 61.9
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 2.6e-06 55.5 45 62.2
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 2.6e-06 55.5 51 49.0
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 2.6e-06 55.5 51 49.0
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 3.4e-06 55.1 42 61.9
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 3.4e-06 55.1 39 69.2
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 3.4e-06 55.1 51 49.0
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 4.4e-06 54.7 42 61.9
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 4.4e-06 54.7 51 54.9
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 4.4e-06 54.7 51 54.9
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 4.4e-06 54.7 51 54.9
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 5.8e-06 54.3 51 52.9
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 7.6e-06 53.9 51 51.0
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 9.9e-06 53.5 51 49.0


User provided reference genes

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