Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.7e-108 396.0 192 100.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 5.1e-89 331.3 205 81.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.3e-80 301.6 196 72.4
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 4.8e-79 298.1 198 72.2
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 4.0e-78 295.0 196 70.9
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.2e-77 293.5 202 70.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.5e-77 293.1 215 69.8
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.5e-77 291.6 207 66.2
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 4.5e-77 291.6 202 70.3
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.3e-76 290.0 202 68.3
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.7e-76 289.7 213 68.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 6.4e-76 287.7 202 70.8
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 8.4e-76 287.3 206 69.4
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.6e-74 283.1 204 67.6
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.1e-74 282.7 201 67.7
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 2.1e-74 282.7 196 68.9
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.5e-74 282.0 199 67.8
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 7.9e-74 280.8 200 68.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.3e-73 280.0 206 66.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.8e-73 279.6 199 70.9
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.3e-73 279.3 204 64.7
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 6.7e-73 277.7 199 68.8
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 8.7e-73 277.3 202 65.8
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 8.7e-73 277.3 202 65.8
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.1e-72 276.9 202 65.8
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 3.3e-72 275.4 196 68.9
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.6e-72 274.6 199 65.8
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 9.6e-72 273.9 199 65.8
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.6e-72 273.9 199 65.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.6e-71 273.1 204 64.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.1e-71 272.7 204 65.7
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 4.8e-71 271.6 202 66.3
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 6.2e-71 271.2 206 63.6
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.1e-70 270.4 238 57.1
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 6.9e-70 267.7 212 62.3
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.0e-70 267.3 187 66.3
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.2e-69 266.9 201 66.2
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.0e-69 266.2 199 64.3
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 3.4e-69 265.4 196 66.3
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 3.4e-69 265.4 198 64.1
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.8e-69 264.6 199 66.3
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 7.6e-69 264.2 200 66.0
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.0e-68 263.8 194 67.5
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.3e-68 263.5 219 60.7
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 3.8e-68 261.9 198 62.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 3.8e-68 261.9 195 63.6
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 3.8e-68 261.9 195 63.6
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 4.9e-68 261.5 200 66.0
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 4.9e-68 261.5 200 64.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 8.4e-68 260.8 198 60.1
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 1.4e-67 260.0 204 63.7
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 2.5e-67 259.2 198 61.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.2e-67 258.8 194 64.9
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 4.2e-67 258.5 198 61.6
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 4.2e-67 258.5 202 61.4
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 4.2e-67 258.5 194 64.9
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.2e-66 256.9 198 61.1
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.6e-66 256.5 198 62.1
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.1e-66 256.1 198 61.1
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.7e-66 255.8 206 60.2
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.5e-66 255.4 199 61.3
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 4.6e-66 255.0 198 60.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 7.9e-66 254.2 198 60.1
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.0e-65 253.8 198 59.6
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.0e-65 253.8 198 59.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.3e-65 253.4 199 62.8
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.3e-65 253.4 200 62.5
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 3.0e-65 252.3 196 65.3
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 3.9e-65 251.9 197 65.0
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 5.1e-65 251.5 186 64.5
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 6.7e-65 251.1 200 63.0
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 6.7e-65 251.1 200 60.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.5e-64 250.0 199 60.8
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 6.3e-63 244.6 199 57.8
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 6.3e-63 244.6 199 60.3
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.1e-62 243.8 192 62.5
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 3.1e-62 242.3 194 60.3
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 6.9e-62 241.1 196 59.2
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 6.9e-62 241.1 200 61.0
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.0e-61 239.6 195 60.5
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 1.9e-59 233.0 188 61.2
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.0e-57 227.3 226 53.5
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 7.4e-56 221.1 206 53.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.8e-55 219.2 135 70.4
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 6.3e-55 218.0 141 69.5
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 2.4e-54 216.1 149 67.1
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 3.0e-49 199.1 200 53.0
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 4.4e-48 195.3 165 54.5
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.7e-47 193.4 175 50.9
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-42 177.2 210 50.0
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 5.2e-41 171.8 174 51.1
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.6e-40 169.5 194 51.0
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 4.4e-40 168.7 152 57.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 8.2e-39 164.5 134 61.2
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 3.5e-37 159.1 105 69.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 1.7e-36 156.8 166 48.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-35 153.7 131 56.5
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.2e-32 144.1 172 45.9
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.8e-30 136.7 133 50.4
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 2.0e-29 133.3 165 42.4
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.3e-25 119.8 69 75.4
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 4.5e-21 105.5 166 39.2
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 1.3e-20 104.0 169 34.9
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.9e-19 100.1 104 51.0
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.5e-19 98.6 88 61.4
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.1e-18 96.7 56 76.8
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-14 84.3 77 54.5
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.6e-13 80.5 48 70.8
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 7.8e-13 78.2 86 51.2
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 2.8e-10 69.7 184 31.5
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 6.1e-10 68.6 45 68.9
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.0e-09 67.8 39 71.8
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.2e-08 64.3 49 65.3
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 3.4e-08 62.8 33 78.8
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 5.8e-08 62.0 62 46.8
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 5.8e-08 62.0 62 46.8
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 3.7e-07 59.3 76 51.3
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 8.3e-07 58.2 31 74.2


User provided reference genes

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