Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36697 Davidia involucrata HOM05D009800 ORTHO05D011618 1.0e-112 410.2 229 100.0
TAR636G0821 Trochodendron aralioides HOM05D009800 ORTHO05D011618 3.9e-35 152.5 228 46.1
Nn8g39099 Nelumbo nucifera HOM05D009800 ORTHO05D001848 3.2e-21 106.3 201 36.8
QL02p042139 Quercus lobata HOM05D009800 ORTHO05D011618 2.1e-20 103.6 249 37.3
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 1.0e-19 101.3 71 69.0
Prupe.7G221600 Prunus persica HOM05D009800 ORTHO05D011618 3.3e-18 96.3 258 36.4
CSS0017187 Camellia sinensis var. sinensis HOM05D003439 ORTHO05D004062 4.3e-18 95.9 224 36.6
COL.COLO4_34766 Corchorus olitorius HOM05D009800 ORTHO05D011618 5.2e-16 89.0 220 35.9
Thecc.09G102100 Theobroma cacao HOM05D009800 ORTHO05D011618 2.6e-15 86.7 247 34.8
CiPaw.04G159000 Carya illinoinensis HOM05D009800 ORTHO05D011618 9.9e-15 84.7 234 34.2
Rhsim05G0041100 Rhododendron simsii HOM05D009800 ORTHO05D011618 9.9e-15 84.7 128 40.6
Duzib168G0690 Durio zibethinus HOM05D009800 ORTHO05D011618 2.2e-14 83.6 234 33.3
RcHm_v2.0_Chr2g0091571 Rosa chinensis HOM05D009800 ORTHO05D011618 1.0e-11 74.7 238 31.5
DCAR_012048 Daucus carota HOM05D009800 ORTHO05D011618 8.7e-11 71.6 117 36.8
Cfa003196 Carpinus fangiana HOM05D064020 ORTHO05D011618 1.1e-10 71.2 93 45.2
Aqoxy6G01532 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.5e-10 70.9 68 48.5
Manes.04G132900 Manihot esculenta HOM05D009800 ORTHO05D011618 1.9e-10 70.5 122 37.7
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.5e-10 70.1 71 46.5
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 3.3e-10 69.7 71 46.5
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 3.3e-10 69.7 67 50.7
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 7.3e-10 68.6 69 49.3
Aqoxy7G03883 Aquilegia oxysepala HOM05D012031 ORTHO05D001848 1.3e-09 67.8 188 29.8
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 1.6e-09 67.4 69 47.8
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 2.8e-09 66.6 129 37.2
ATR0705G057 Amborella trichopoda HOM05D002243 ORTHO05D001848 3.6e-09 66.2 217 34.6
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 4.8e-09 65.9 152 34.2
FAN26G2992 Fragaria x ananassa HOM05D009800 ORTHO05D011618 4.8e-09 65.9 201 36.3
FAN28G1906 Fragaria x ananassa HOM05D009800 ORTHO05D011618 6.2e-09 65.5 231 31.2
Manes.11G034800 Manihot esculenta HOM05D009800 ORTHO05D011618 6.2e-09 65.5 109 33.9
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 6.2e-09 65.5 68 45.6
ATR0767G056 Amborella trichopoda HOM05D002243 ORTHO05D001848 1.4e-08 64.3 82 43.9
FAN08G2076 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.4e-08 64.3 111 36.9
FAN26G1403 Fragaria x ananassa HOM05D009800 ORTHO05D011618 1.4e-08 64.3 201 35.8
Nn6g35306 Nelumbo nucifera HOM05D009800 ORTHO05D011618 1.8e-08 63.9 212 33.5
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 1.8e-08 63.9 70 47.1
SalBow6G2660 Salvia bowleyana HOM05D002243 ORTHO05D001848 1.8e-08 63.9 67 49.3
SalBow6G4432 Salvia bowleyana HOM05D002243 ORTHO05D001848 1.8e-08 63.9 67 49.3
MBI04_g06589_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 3.1e-08 63.2 104 38.5
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 3.1e-08 63.2 67 46.3
PGR042G1190 Punica granatum HOM05D002243 ORTHO05D001848 4.0e-08 62.8 70 42.9
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 5.3e-08 62.4 68 44.1
Glyma.05G227600 Glycine max HOM05D012031 ORTHO05D014454 6.9e-08 62.0 221 33.9
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 6.9e-08 62.0 72 50.0
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 6.9e-08 62.0 115 40.0
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 9.0e-08 61.6 65 47.7
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 9.0e-08 61.6 65 47.7
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 9.0e-08 61.6 67 43.3
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.2e-07 61.2 111 40.5
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 1.2e-07 61.2 113 38.1
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.5e-07 60.8 67 47.8
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 1.5e-07 60.8 67 43.3
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.5e-07 60.8 67 44.8
Ciclev10002567m.g Citrus clementina HOM05D002243 ORTHO05D001848 1.5e-07 60.8 115 36.5
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 1.5e-07 60.8 65 44.6
MBI16_g31808_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 1.5e-07 60.8 91 42.9
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 1.5e-07 60.8 71 40.8
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 2.0e-07 60.5 70 41.4
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 2.0e-07 60.5 115 39.1
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 2.0e-07 60.5 68 41.2
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 2.6e-07 60.1 70 47.1
Manes.05G185500 Manihot esculenta HOM05D002243 ORTHO05D001848 2.6e-07 60.1 134 35.1
Gohir.A06G027500 Gossypium hirsutum HOM05D002243 ORTHO05D001848 3.4e-07 59.7 119 39.5
SGA_v2.0_scaffold342G49428 Striga asiatica HOM05D002243 ORTHO05D001848 3.4e-07 59.7 69 44.9
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 4.4e-07 59.3 70 41.4
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 7.6e-07 58.5 67 43.3
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 7.6e-07 58.5 67 43.3
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 7.6e-07 58.5 70 41.4
Dinv09523 Davidia involucrata HOM05D002243 ORTHO05D001848 7.6e-07 58.5 67 41.8
CANSAT25G2495 Cannabis sativa HOM05D002243 ORTHO05D001848 9.9e-07 58.2 65 47.7
DCAR_001867 Daucus carota HOM05D002243 ORTHO05D001848 9.9e-07 58.2 66 40.9
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.3e-06 57.8 67 41.8
AUR62027035 Chenopodium quinoa HOM05D002243 ORTHO05D001848 1.3e-06 57.8 67 43.3
ClCG10G009920 Citrullus lanatus HOM05D002243 ORTHO05D001848 1.3e-06 57.8 73 41.1
PSO210G2477 Papaver somniferum HOM05D049672 ORTHO05D011618 1.3e-06 57.8 197 30.5
Psat6g212880 Pisum sativum HOM05D002243 ORTHO05D001848 1.3e-06 57.8 65 41.5
GSVIVG01017005001 Vitis vinifera HOM05D009800 ORTHO05D011618 1.3e-06 57.8 95 35.8
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.7e-06 57.4 68 41.2
arahy.Tifrunner.gnm1.ann1.2Q65GK Arachis hypogaea HOM05D002243 ORTHO05D001848 1.7e-06 57.4 61 47.5
arahy.Tifrunner.gnm1.ann1.XGM7WG Arachis hypogaea HOM05D002243 ORTHO05D001848 1.7e-06 57.4 61 47.5
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 1.7e-06 57.4 70 41.4
unitig_61.g26040 Utricularia gibba HOM05D002243 ORTHO05D001848 1.7e-06 57.4 68 45.6
Duzib041G0685 Durio zibethinus HOM05D002243 ORTHO05D001848 2.2e-06 57.0 105 39.0
Duzib052G0991 Durio zibethinus HOM05D002243 ORTHO05D001848 2.2e-06 57.0 67 40.3
FAN23G0260 Fragaria x ananassa HOM05D009800 ORTHO05D011618 2.2e-06 57.0 231 29.0
Gohir.D06G024900 Gossypium hirsutum HOM05D002243 ORTHO05D001848 2.2e-06 57.0 138 35.5
Gorai.010G029300 Gossypium raimondii HOM05D002243 ORTHO05D001848 2.2e-06 57.0 118 38.1
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 2.2e-06 57.0 122 32.8
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 2.2e-06 57.0 101 39.6
MSTRG.27769 Avicennia marina HOM05D002243 ORTHO05D001848 2.9e-06 56.6 112 34.8
Lalb_Chr09g0331491 Lupinus albus HOM05D012031 ORTHO05D014454 2.9e-06 56.6 226 27.9
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 2.9e-06 56.6 131 35.1
SEGI_35164 Sequoiadendron giganteum HOM05D002243 ORTHO05D001848 2.9e-06 56.6 123 36.6
AUR62030879 Chenopodium quinoa HOM05D002243 ORTHO05D001848 3.8e-06 56.2 47 48.9
COL.COLO4_35368 Corchorus olitorius HOM05D002243 ORTHO05D001848 3.8e-06 56.2 151 39.1
Duzib264G1092 Durio zibethinus HOM05D002243 ORTHO05D001848 3.8e-06 56.2 63 49.2
Sc14g0000390 Simmondsia chinensis HOM05D039561 ORTHO05D034354 3.8e-06 56.2 74 41.9
Sc14g0002480 Simmondsia chinensis HOM05D002243 ORTHO05D001848 3.8e-06 56.2 67 44.8
MELO3C018032.2 Cucumis melo HOM05D002243 ORTHO05D001848 4.9e-06 55.8 72 40.3
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 4.9e-06 55.8 123 34.1
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 4.9e-06 55.8 126 34.1
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 4.9e-06 55.8 117 37.6
TWI14G1334 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 4.9e-06 55.8 72 38.9
Gohir.D02G234800 Gossypium hirsutum HOM05D002243 ORTHO05D001848 6.4e-06 55.5 67 38.8
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 6.4e-06 55.5 67 40.3
DCAR_021931 Daucus carota HOM05D002243 ORTHO05D001848 8.4e-06 55.1 217 28.1
Migut.B00490 Erythranthe guttata HOM05D002243 ORTHO05D001848 8.4e-06 55.1 133 33.8
FvH4_1g05950 Fragaria vesca HOM05D009800 ORTHO05D011618 8.4e-06 55.1 230 27.8
FAN19G0069 Fragaria x ananassa HOM05D009800 ORTHO05D011618 8.4e-06 55.1 200 33.0
Hund06501 Selenicereus undatus HOM05D002243 ORTHO05D001848 8.4e-06 55.1 46 52.2
HPP92_028212 Vanilla planifolia HOM05D028665 ORTHO05D001848 8.4e-06 55.1 131 31.3


User provided reference genes

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