Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 4.9e-279 963.8 466 100.0
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 6.2e-250 867.1 466 89.3
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.4e-249 865.9 466 88.4
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.8e-249 865.5 467 88.4
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 4.0e-249 864.4 466 89.3
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.2e-247 858.6 466 88.2
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.2e-246 854.4 500 83.2
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 1.2e-245 852.8 464 86.9
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 1.2e-245 852.8 466 86.7
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.1e-245 852.0 466 87.1
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.7e-245 851.7 466 87.1
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 3.0e-244 848.2 466 86.3
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 3.3e-243 844.7 466 86.3
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 3.3e-243 844.7 466 86.9
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 4.3e-243 844.3 464 86.9
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 5.7e-243 844.0 466 86.5
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 9.7e-243 843.2 466 85.8
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.8e-242 840.9 466 85.4
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.2e-242 840.1 466 85.4
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.4e-241 839.3 466 85.0
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.8e-241 839.0 466 85.2
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.2e-240 836.3 466 86.1
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.6e-240 835.1 466 85.8
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 2.9e-239 831.6 466 83.7
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 5.0e-239 830.9 466 84.1
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 8.5e-239 830.1 466 85.2
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 2.5e-238 828.6 465 84.9
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.2e-237 826.2 463 85.1
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 2.7e-237 825.1 466 82.2
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.7e-237 825.1 491 80.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 3.6e-237 824.7 464 85.1
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 7.9e-237 823.5 466 83.7
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.4e-236 822.8 467 84.6
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 6.7e-236 820.5 464 83.0
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.0e-235 818.9 467 83.1
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 3.3e-235 818.1 467 83.9
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 3.3e-235 818.1 467 82.7
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.3e-235 817.8 466 83.9
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 5.7e-235 817.4 466 84.5
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 7.4e-235 817.0 472 83.5
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.3e-234 816.2 464 84.9
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.2e-234 815.5 467 83.9
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.3e-234 813.9 472 83.1
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 8.2e-234 813.5 467 83.7
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.1e-233 813.1 464 83.6
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.8e-233 812.4 467 83.1
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 1.8e-233 812.4 466 83.3
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 2.4e-233 812.0 466 83.0
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.1e-233 811.6 472 82.8
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.1e-233 811.6 472 82.8
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.1e-233 811.6 464 84.1
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 5.3e-233 810.8 464 83.8
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 2.0e-232 808.9 466 81.8
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.0e-232 808.9 466 82.2
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.0e-232 808.9 466 82.2
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 2.0e-232 808.9 466 82.2
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.0e-232 808.9 467 82.9
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 4.5e-232 807.7 466 82.4
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.5e-232 807.7 467 83.1
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 4.5e-232 807.7 466 83.0
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 7.7e-232 807.0 476 81.5
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.0e-231 806.6 467 83.1
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.7e-231 805.8 467 82.9
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.7e-231 805.8 490 79.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.7e-231 805.8 466 82.6
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 1.7e-231 805.8 467 82.2
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 2.9e-231 805.1 466 79.8
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 5.0e-231 804.3 466 82.6
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 6.5e-231 803.9 466 82.6
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 8.5e-231 803.5 467 82.4
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.4e-230 802.7 466 81.8
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.4e-230 802.7 467 82.2
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 4.2e-230 801.2 467 81.6
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.6e-229 798.1 476 80.3
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 7.9e-229 797.0 466 83.3
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.0e-228 796.6 467 81.6
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 1.4e-228 796.2 467 81.2
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 3.0e-228 795.0 466 82.2
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 3.9e-228 794.7 490 79.0
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 3.9e-228 794.7 490 79.0
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 3.9e-228 794.7 472 79.7
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 3.9e-228 794.7 466 81.3
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 1.5e-227 792.7 467 80.9
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 5.7e-227 790.8 467 80.7
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 9.7e-227 790.0 467 80.9
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 9.7e-227 790.0 467 80.9
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 4.8e-226 787.7 468 81.0
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 6.3e-226 787.3 464 82.5
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 1.1e-225 786.6 467 80.3
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 1.1e-225 786.6 467 80.3
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.4e-225 786.2 467 79.9
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.8e-225 785.8 467 80.3
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.8e-225 785.8 467 80.3
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 5.3e-225 784.3 467 79.9
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 9.1e-225 783.5 467 80.1
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.6e-224 781.9 467 79.4
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 4.5e-224 781.2 467 79.4
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 7.7e-224 780.4 467 79.4
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 7.7e-224 780.4 467 79.4
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 5.0e-223 777.7 461 78.7
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 6.5e-223 777.3 467 79.2
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 1.1e-222 776.5 471 79.8
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 2.1e-221 772.3 468 78.6
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 1.0e-220 770.0 468 78.6
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 2.3e-220 768.8 466 79.4
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 2.6e-219 765.4 465 77.8
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 2.6e-219 765.4 465 77.6
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 2.6e-219 765.4 466 78.8
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.4e-219 764.6 466 80.0
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.8e-218 761.9 519 73.6
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.2e-218 760.4 464 79.7
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 5.9e-216 754.2 470 78.1
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 7.7e-216 753.8 466 78.3
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 8.5e-215 750.4 466 79.0
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 5.5e-214 747.7 465 76.8
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.2e-213 746.5 467 76.2
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.6e-213 746.1 466 77.0
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 1.4e-212 743.0 414 86.2
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.8e-212 742.7 465 76.3
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 8.8e-212 740.3 496 74.0
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.2e-211 740.0 462 76.8
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.7e-211 737.6 413 83.8
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 9.7e-211 736.9 466 77.9
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.7e-210 736.1 445 79.6
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 2.8e-210 735.3 462 75.8
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 4.8e-210 734.6 462 75.5
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 7.0e-209 730.7 466 75.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.7e-208 728.8 466 75.1
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.5e-208 728.4 533 68.5
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 3.8e-207 724.9 465 75.3
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 3.8e-207 724.9 418 82.1
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 3.8e-207 724.9 416 82.5
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.5e-206 723.0 467 77.1
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 9.4e-206 720.3 466 73.8
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.2e-205 719.9 499 71.9
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.6e-205 719.5 466 73.6
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 4.4e-203 711.4 469 77.2
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 7.0e-201 704.1 462 73.2
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.4e-195 684.9 475 70.7
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 7.0e-193 677.6 464 71.8
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.0e-188 663.7 466 69.1
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 2.3e-188 662.5 382 82.7
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 5.4e-185 651.4 475 68.2
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.6e-181 639.8 326 93.6
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.2e-177 625.5 442 70.6
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 6.0e-168 594.7 326 85.9
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 5.6e-166 588.2 507 61.3
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 2.6e-163 579.3 420 63.6
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 3.4e-163 578.9 432 63.7
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 3.1e-148 529.3 411 62.0
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 2.9e-146 522.7 474 54.6
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 2.4e-140 503.1 288 84.0
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 2.5e-137 493.0 326 74.5
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 2.3e-135 486.5 289 81.3
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.3e-133 480.7 265 82.6
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.8e-133 478.8 293 79.2
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.6e-131 473.0 291 77.7
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 3.6e-112 409.5 237 79.3
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 2.5e-105 386.7 244 77.5
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.7e-91 340.1 196 80.6
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.1e-63 248.4 150 79.3
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 2.1e-59 234.2 397 35.8
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 6.0e-51 206.1 411 33.1
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.2e-47 193.0 203 55.2
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 9.0e-39 165.6 141 54.6
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.4e-36 158.3 109 69.7
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 6.6e-34 149.4 83 80.7
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 4.2e-28 130.2 86 74.4
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-22 112.1 142 51.4
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 2.2e-21 107.8 59 79.7
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 4.9e-21 106.7 60 81.7
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 8.7e-18 95.9 149 36.9
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 2.8e-08 64.3 47 66.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.9e-07 59.7 37 73.0


User provided reference genes

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