Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 2.7e-55 218.4 108 100.0
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 8.2e-28 127.1 94 70.2
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 5.1e-22 107.8 93 61.3
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 9.7e-21 103.6 69 72.5
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 2.8e-20 102.1 92 57.6
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 8.2e-20 100.5 90 58.9
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 1.1e-19 100.1 82 65.9
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 1.8e-19 99.4 92 58.7
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 4.1e-19 98.2 77 62.3
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 2.6e-18 95.5 87 56.3
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 5.9e-18 94.4 70 62.9
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.0e-17 93.6 69 66.7
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 1.7e-17 92.8 74 62.2
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 2.9e-17 92.0 92 55.4
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 5.0e-17 91.3 70 62.9
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 6.5e-17 90.9 99 46.5
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 8.5e-17 90.5 69 68.1
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 1.4e-16 89.7 96 52.1
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 1.9e-16 89.4 68 66.2
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 1.9e-16 89.4 70 60.0
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 3.2e-16 88.6 72 58.3
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 7.2e-16 87.4 85 56.5
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 7.2e-16 87.4 85 56.5
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 3.6e-15 85.1 73 61.6
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 8.0e-15 84.0 77 59.7
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 1.4e-14 83.2 45 82.2
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 1.8e-14 82.8 68 57.4
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.3e-14 82.4 89 53.9
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 3.0e-14 82.0 70 55.7
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 6.7e-14 80.9 45 77.8
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 6.7e-14 80.9 45 77.8
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 6.7e-14 80.9 61 65.6
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 8.8e-14 80.5 74 62.2
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 1.1e-13 80.1 58 65.5
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 1.5e-13 79.7 89 51.7
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 2.6e-13 79.0 54 66.7
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 2.6e-13 79.0 53 69.8
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 4.4e-13 78.2 45 77.8
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 4.4e-13 78.2 45 77.8
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 1.7e-12 76.3 104 45.2
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 6.3e-12 74.3 65 61.5
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 6.3e-12 74.3 68 55.9
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 6.3e-12 74.3 63 57.1
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 1.4e-11 73.2 60 58.3
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 2.4e-11 72.4 68 54.4
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 2.4e-11 72.4 90 44.4
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 3.1e-11 72.0 68 54.4
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 4.1e-11 71.6 62 58.1
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 7.0e-11 70.9 57 63.2
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 7.0e-11 70.9 57 63.2
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 9.1e-11 70.5 69 53.6
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.2e-10 70.1 56 62.5
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.2e-10 70.1 56 62.5
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 1.6e-10 69.7 41 73.2
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.6e-10 68.9 89 48.3
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 3.5e-10 68.6 73 46.6
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 3.5e-10 68.6 64 50.0
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 4.5e-10 68.2 43 72.1
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 2.2e-09 65.9 63 52.4
PGR102G0794 Punica granatum HOM05D008202 ORTHO05D010302 3.8e-09 65.1 79 48.1
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 5.0e-09 64.7 63 49.2
unitig_52.g17095 Utricularia gibba HOM05D008202 ORTHO05D010302 6.5e-09 64.3 69 49.3
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 8.5e-09 63.9 38 71.1
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 8.5e-09 63.9 50 58.0
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 7.2e-08 60.8 64 53.1
unitig_52.g17250 Utricularia gibba HOM05D008202 ORTHO05D010302 1.6e-07 59.7 69 46.4
Os01g0742766 Oryza sativa ssp. japonica HOM05D008202 ORTHO05D010302 4.7e-07 58.2 76 39.5
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 1.0e-06 57.0 70 47.1
Zm00001eb371180 Zea mays HOM05D008202 ORTHO05D010302 3.0e-06 55.5 61 42.6
Mapoly0004s0023 Marchantia polymorpha HOM05D039400 ORTHO05D034304 6.7e-06 54.3 53 50.9


User provided reference genes

Program Settings