Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36676 Davidia involucrata HOM05D004751 ORTHO05D005819 1.8e-238 828.9 444 100.0
Dinv42256 Davidia involucrata HOM05D004751 ORTHO05D005819 2.0e-205 719.2 463 86.0
CSS0000434 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 1.3e-188 663.3 462 80.3
CSS0026223 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 1.3e-188 663.3 462 80.3
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 1.4e-187 659.8 466 80.3
vmacro10847 Vaccinium macrocarpon HOM05D004751 ORTHO05D005819 1.5e-184 649.8 462 79.4
Actinidia17515 Actinidia chinensis HOM05D004751 ORTHO05D005819 3.3e-184 648.7 463 78.0
RcHm_v2.0_Chr1g0331571 Rosa chinensis HOM05D004751 ORTHO05D005819 7.4e-184 647.5 462 77.5
Prupe.2G065200 Prunus persica HOM05D004751 ORTHO05D005819 1.7e-183 646.4 462 77.1
COL.COLO4_34728 Corchorus olitorius HOM05D004751 ORTHO05D005819 2.8e-183 645.6 462 77.7
Thecc.09G099100 Theobroma cacao HOM05D004751 ORTHO05D005819 2.8e-183 645.6 462 77.3
Rhsim05G0038900 Rhododendron simsii HOM05D004751 ORTHO05D005819 1.8e-182 642.9 462 78.6
Duzib150G1241 Durio zibethinus HOM05D004751 ORTHO05D005819 6.9e-182 641.0 463 76.7
Gohir.A05G026300 Gossypium hirsutum HOM05D004751 ORTHO05D005819 2.0e-181 639.4 460 76.7
Gohir.D05G027800 Gossypium hirsutum HOM05D004751 ORTHO05D005819 5.9e-181 637.9 462 76.8
FvH4_7g05110 Fragaria vesca HOM05D004751 ORTHO05D005819 1.3e-180 636.7 461 76.8
FAN06G4551 Fragaria x ananassa HOM05D004751 ORTHO05D005819 1.3e-180 636.7 461 76.8
QL02p040907 Quercus lobata HOM05D004751 ORTHO05D005819 1.3e-180 636.7 462 77.3
Gorai.009G028000 Gossypium raimondii HOM05D004751 ORTHO05D005819 2.2e-180 636.0 462 76.4
MD07G1058300 Malus domestica HOM05D004751 ORTHO05D005819 8.5e-180 634.0 462 76.2
Ciclev10007242m.g Citrus clementina HOM05D004751 ORTHO05D005819 1.1e-179 633.6 462 77.1
Peaxi162Scf01157g00011 Petunia axillaris HOM05D004751 ORTHO05D005819 2.5e-179 632.5 466 75.8
Cc06_g10590 Coffea canephora HOM05D004751 ORTHO05D005819 5.5e-179 631.3 462 77.1
Nitab4.5_0004673g0040 Nicotiana tabacum HOM05D004751 ORTHO05D005819 7.2e-179 630.9 463 75.6
Atru.chr7.1477 Acer truncatum HOM05D004751 ORTHO05D005819 2.7e-178 629.0 462 76.4
DCAR_028653 Daucus carota HOM05D004751 ORTHO05D005819 3.6e-178 628.6 454 77.8
Manes.16G108000 Manihot esculenta HOM05D004751 ORTHO05D005819 7.9e-178 627.5 435 80.7
ClCG03G016070 Citrullus lanatus HOM05D004751 ORTHO05D005819 2.3e-177 625.9 462 76.0
Oeu021455.1 Olea europaea HOM05D004751 ORTHO05D005819 3.0e-177 625.5 462 75.8
FAN01G0060 Fragaria x ananassa HOM05D004751 ORTHO05D005819 1.1e-176 623.6 459 75.6
PGSC0003DMG400023589 Solanum tuberosum HOM05D004751 ORTHO05D005819 3.3e-176 622.1 463 74.9
Sopen04g006260 Solanum pennellii HOM05D004751 ORTHO05D005819 7.4e-176 620.9 463 74.7
CANSAT56G3494 Cannabis sativa HOM05D004751 ORTHO05D005819 3.7e-175 618.6 462 74.2
MD02G1262100 Malus domestica HOM05D004751 ORTHO05D005819 1.8e-174 616.3 462 74.7
Cfa003165 Carpinus fangiana HOM05D004751 ORTHO05D005819 1.2e-173 613.6 462 74.7
Haze_25834 Corylus avellana HOM05D004751 ORTHO05D005819 1.2e-173 613.6 462 74.7
CAN.G787.12 Capsicum annuum HOM05D004751 ORTHO05D005819 3.5e-173 612.1 463 73.7
TAR626G1784 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.5e-173 612.1 462 75.1
TAR639G0003 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.5e-173 612.1 462 75.1
CsaV3_1G039890 Cucumis sativus L. HOM05D004751 ORTHO05D005819 2.9e-172 609.0 445 75.5
SGA_v2.0_scaffold19G08722 Striga asiatica HOM05D004751 ORTHO05D005819 5.0e-172 608.2 465 73.3
Sed0000923 Sechium edule HOM05D004751 ORTHO05D005819 2.5e-171 605.9 462 72.9
SalBow1G2004 Salvia bowleyana HOM05D004751 ORTHO05D005819 3.2e-171 605.5 465 72.9
MELO3C015420.2 Cucumis melo HOM05D004751 ORTHO05D005819 2.1e-170 602.8 445 75.1
Lj7C667T4 Lonicera japonica HOM05D004751 ORTHO05D005819 2.1e-170 602.8 430 79.5
TWI34G0109 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 2.3e-169 599.4 463 73.2
Lsat_1_v5_gn_7_39580 Lactuca sativa HOM05D004751 ORTHO05D005819 5.2e-169 598.2 455 75.8
TPR.G31000 Trifolium pratense HOM05D004751 ORTHO05D005819 3.3e-168 595.5 465 74.2
Glyma.07G125200 Glycine max HOM05D004751 ORTHO05D005819 5.7e-168 594.7 462 73.4
Glyma.01G006600 Glycine max HOM05D004751 ORTHO05D005819 7.4e-168 594.3 465 73.5
Potri.006G153100 Populus trichocarpa HOM05D004751 ORTHO05D005819 7.4e-168 594.3 438 76.9
TAR383G0360 Trochodendron aralioides HOM05D004751 ORTHO05D005819 7.4e-168 594.3 405 81.0
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 3.1e-166 589.0 457 74.6
Ca_25582_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 4.1e-166 588.6 461 73.1
Lj2g0020264 Lotus japonicus HOM05D004751 ORTHO05D005819 9.1e-166 587.4 462 73.2
Migut.K00548 Erythranthe guttata HOM05D004751 ORTHO05D005819 1.2e-165 587.0 444 74.8
PSO210G3406 Papaver somniferum HOM05D004751 ORTHO05D005819 1.2e-165 587.0 405 82.0
Eucgr.C03719 Eucalyptus grandis HOM05D004751 ORTHO05D005819 1.6e-165 586.6 459 72.5
PSO210G2464 Papaver somniferum HOM05D004751 ORTHO05D005819 2.0e-165 586.3 405 82.0
TWI32G0016 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 4.5e-165 585.1 463 71.9
Psat1g048040 Pisum sativum HOM05D004751 ORTHO05D005819 5.9e-165 584.7 463 71.7
Sabra06G0121300 Salix brachista HOM05D004751 ORTHO05D005819 7.7e-165 584.3 438 75.6
HanXRQChr03g0061061 Helianthus annuus HOM05D004751 ORTHO05D005819 3.8e-164 582.0 440 76.8
Phvul.004G175100 Phaseolus vulgaris HOM05D004751 ORTHO05D005819 2.5e-163 579.3 465 70.8
Medtr6g088835 Medicago truncatula HOM05D004751 ORTHO05D005819 4.2e-163 578.6 463 71.9
MSTRG.26388 Avicennia marina HOM05D004751 ORTHO05D005819 2.1e-162 576.2 465 71.0
EL10Ac8g18369 Beta vulgaris HOM05D004751 ORTHO05D005819 6.1e-162 574.7 459 71.7
VMungo0464G0426 Vigna mungo HOM05D004751 ORTHO05D005819 6.7e-161 571.2 462 70.1
arahy.Tifrunner.gnm1.ann1.U02M06 Arachis hypogaea HOM05D004751 ORTHO05D005819 3.7e-159 565.5 435 74.7
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea HOM05D004751 ORTHO05D005819 4.8e-159 565.1 435 74.5
Lalb_Chr14g0371941 Lupinus albus HOM05D004751 ORTHO05D005819 4.8e-159 565.1 462 70.3
Aqoxy7G03607 Aquilegia oxysepala HOM05D004751 ORTHO05D005819 8.3e-159 564.3 394 79.9
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea HOM05D004751 ORTHO05D005819 7.7e-157 557.8 462 63.4
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea HOM05D004751 ORTHO05D005819 1.5e-155 553.5 462 63.0
AUR62021393 Chenopodium quinoa HOM05D004751 ORTHO05D005819 7.2e-155 551.2 464 69.0
Hund26286 Selenicereus undatus HOM05D004751 ORTHO05D005819 7.2e-155 551.2 462 69.3
THA.LOC104814595 Tarenaya hassleriana HOM05D004751 ORTHO05D005819 1.0e-153 547.4 463 67.6
AUR62010880 Chenopodium quinoa HOM05D004751 ORTHO05D005819 4.0e-153 545.4 464 68.1
Solyc04g012170.4 Solanum lycopersicum HOM05D004751 ORTHO05D005819 1.7e-151 540.0 463 67.4
Ah.09g230480 Amaranthus hybridus HOM05D004751 ORTHO05D005819 2.8e-151 539.3 459 69.5
PGR102G2506 Punica granatum HOM05D004751 ORTHO05D005819 1.2e-149 533.9 405 76.3
Thhalv10024212m.g Eutrema salsugineum HOM05D004751 ORTHO05D005819 1.6e-149 533.5 395 73.7
MBI15_g07764_MAGBIO Magnolia biondii HOM05D004751 ORTHO05D005819 1.6e-149 533.5 470 66.8
Sp7g27250 Schrenkiella parvula HOM05D004751 ORTHO05D005819 7.7e-149 531.2 398 71.9
AL7G23020 Arabidopsis lyrata HOM05D004751 ORTHO05D005819 1.7e-148 530.0 455 65.3
Aa31LG2G21070 Aethionema arabicum HOM05D004751 ORTHO05D005819 6.6e-148 528.1 398 73.1
AT4G29380 Arabidopsis thaliana HOM05D004751 ORTHO05D005819 1.9e-147 526.6 452 65.5
Carub.0007s1117 Capsella rubella HOM05D004751 ORTHO05D005819 3.3e-147 525.8 455 65.3
Sc08g0008060 Simmondsia chinensis HOM05D004751 ORTHO05D005819 1.4e-145 520.4 393 75.3
CARHR237190 Cardamine hirsuta HOM05D004751 ORTHO05D005819 6.3e-143 511.5 394 71.8
GSVIVG01015287001 Vitis vinifera HOM05D004751 ORTHO05D005819 4.1e-142 508.8 405 73.8
Oeu018580.2 Olea europaea HOM05D004751 ORTHO05D005819 2.0e-141 506.5 411 71.3
A01p08650 Brassica napus HOM05D004751 ORTHO05D005819 2.3e-140 503.1 398 71.1
BraA01t00815Z Brassica rapa HOM05D004751 ORTHO05D005819 2.3e-140 503.1 398 71.1
C01p10120 Brassica napus HOM05D004751 ORTHO05D005819 5.0e-140 501.9 398 70.6
BolC1t00970H Brassica oleracea HOM05D004751 ORTHO05D005819 5.6e-139 498.4 398 70.6
unitig_8.g4485 Utricularia gibba HOM05D004751 ORTHO05D005819 6.0e-133 478.4 381 72.2
ATR0730G043 Amborella trichopoda HOM05D004751 ORTHO05D005819 1.0e-132 477.6 388 69.8
Cpa.g.sc78.25 Carica papaya HOM05D004751 ORTHO05D005819 1.4e-129 467.2 335 80.3
SHI02649 Sapria himalayana HOM05D004751 ORTHO05D005819 1.7e-119 433.7 453 58.9
Zm00001eb257890 Zea mays HOM05D004751 ORTHO05D005819 2.0e-104 383.6 335 65.7
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 6.4e-103 378.6 353 64.9
Zm00001eb192340 Zea mays HOM05D004751 ORTHO05D005819 2.3e-100 370.2 333 64.6
Pp3c9_3860 Physcomitrium patens HOM05D004751 ORTHO05D005819 1.5e-99 367.5 345 64.9
RcHm_v2.0_Chr1g0332501 Rosa chinensis HOM05D004751 ORTHO05D005819 1.5e-99 367.5 416 53.4
Pp3c15_10000 Physcomitrium patens HOM05D004751 ORTHO05D005819 4.8e-98 362.5 343 64.4
SMO347G0104 Selaginella moellendorffii HOM05D004751 ORTHO05D005819 2.3e-92 343.6 339 60.2
Ca_25584_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 2.5e-91 340.1 257 68.5
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis HOM05D004751 ORTHO05D005819 3.7e-90 336.3 349 58.5
Mapoly0002s0158 Marchantia polymorpha HOM05D004751 ORTHO05D005819 1.4e-89 334.3 344 58.7
BcaC09g51723 Brassica carinata HOM05D004751 ORTHO05D005819 3.2e-86 323.2 398 54.0
CDE04G1922 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 1.8e-81 307.4 235 72.3
Hma1.2p1_0386F.1_g141720 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 2.9e-79 300.1 236 70.8
Nitab4.5_0001242g0100 Nicotiana tabacum HOM05D004751 ORTHO05D005819 3.5e-77 293.1 221 70.6
Hund09091 Selenicereus undatus HOM05D004751 ORTHO05D005819 2.2e-63 247.3 215 60.9
CBR_g47981 Chara braunii HOM05D004751 ORTHO05D005819 8.8e-60 235.3 428 41.4
PRCOL_00004168 Prasinoderma coloniale HOM05D004751 ORTHO05D005819 1.2e-40 171.8 353 32.6
Cre06.g290500 Chlamydomonas reinhardtii HOM05D004751 ORTHO05D005819 2.5e-30 137.5 334 30.2
CDE04G0916 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 4.3e-22 110.2 62 83.9
ATR0661G544 Amborella trichopoda HOM05D004751 ORTHO05D005819 1.7e-07 61.6 146 34.9


User provided reference genes

Program Settings