Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36587 Davidia involucrata HOM05D006405 ORTHO05D007943 1.3e-39 167.2 204 100.0
CSS0000400 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 1.1e-20 104.4 67 79.1
CSS0009020 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 1.3e-18 97.4 67 77.6
Rhsim01G0089400 Rhododendron simsii HOM05D006405 ORTHO05D007943 1.7e-18 97.1 67 74.6
Eucgr.C01102 Eucalyptus grandis HOM05D006405 ORTHO05D007943 5.0e-18 95.5 67 65.7
Lj7C637T6 Lonicera japonica HOM05D006405 ORTHO05D007943 6.5e-18 95.1 67 67.2
GSVIVG01015463001 Vitis vinifera HOM05D006405 ORTHO05D007943 1.5e-17 94.0 67 65.7
Actinidia26418 Actinidia chinensis HOM05D000063 ORTHO05D001671 3.2e-17 92.8 56 80.4
TAR636G3075 Trochodendron aralioides HOM05D006405 ORTHO05D007943 3.2e-17 92.8 60 68.3
Haze_25659 Corylus avellana HOM05D006405 ORTHO05D007943 1.8e-15 87.0 66 66.7
Nn8g39326 Nelumbo nucifera HOM05D006405 ORTHO05D007943 3.0e-15 86.3 67 67.2
Cfa012812 Carpinus fangiana HOM05D006405 ORTHO05D007943 1.2e-14 84.3 66 65.2
Ciclev10008764m.g Citrus clementina HOM05D006405 ORTHO05D007943 1.5e-14 84.0 65 63.1
Hma1.2p1_0018F.1_g012980 Hydrangea macrophylla HOM05D006405 ORTHO05D007943 1.5e-14 84.0 52 73.1
TWI32G1134 Tripterygium wilfordii HOM05D006405 ORTHO05D007943 2.0e-14 83.6 67 59.7
Thecc.09G118300 Theobroma cacao HOM05D006405 ORTHO05D007943 2.6e-14 83.2 67 62.7
Duzib150G0454 Durio zibethinus HOM05D006405 ORTHO05D007943 3.3e-14 82.8 66 65.2
Potri.018G074100 Populus trichocarpa HOM05D006405 ORTHO05D007943 5.7e-14 82.0 61 59.0
Atru.chr7.1266 Acer truncatum HOM05D006405 ORTHO05D007943 1.7e-13 80.5 66 60.6
Duzib168G0125 Durio zibethinus HOM05D006405 ORTHO05D007943 1.7e-13 80.5 67 64.2
Dinv41556 Davidia involucrata HOM05D006405 ORTHO05D007943 2.2e-13 80.1 45 86.7
PGR142G3933 Punica granatum HOM05D006405 ORTHO05D007943 2.8e-13 79.7 67 58.2
QL02p086599 Quercus lobata HOM05D006405 ORTHO05D007943 2.8e-13 79.7 55 67.3
Nn2g11875 Nelumbo nucifera HOM05D006405 ORTHO05D007943 3.7e-13 79.3 66 65.2
Prupe.7G236000 Prunus persica HOM05D006405 ORTHO05D007943 4.8e-13 79.0 66 60.6
Cc06_g09130 Coffea canephora HOM05D006405 ORTHO05D007943 1.4e-12 77.4 66 56.1
EL10Ac8g18573 Beta vulgaris HOM05D006405 ORTHO05D007943 3.1e-12 76.3 67 56.7
RcHm_v2.0_Chr2g0089591 Rosa chinensis HOM05D006405 ORTHO05D007943 3.1e-12 76.3 66 62.1
CiPaw.03G237400 Carya illinoinensis HOM05D006405 ORTHO05D007943 4.1e-12 75.9 59 64.4
DCAR_017855 Daucus carota HOM05D006405 ORTHO05D007943 1.2e-11 74.3 64 54.7
Phvul.003G159900 Phaseolus vulgaris HOM05D006405 ORTHO05D007943 2.7e-11 73.2 62 56.5
Migut.K00484 Erythranthe guttata HOM05D006405 ORTHO05D007943 3.5e-11 72.8 68 55.9
CDE01G0658 Ceratophyllum demersum HOM05D006405 ORTHO05D007943 5.9e-11 72.0 64 56.2
MD02G1039700 Malus domestica HOM05D006405 ORTHO05D007943 5.9e-11 72.0 64 57.8
MD15G1180600 Malus domestica HOM05D006405 ORTHO05D007943 5.9e-11 72.0 66 59.1
FAN26G0760 Fragaria x ananassa HOM05D006405 ORTHO05D007943 7.7e-11 71.6 66 57.6
ClCG11G002710 Citrullus lanatus HOM05D006405 ORTHO05D007943 1.3e-10 70.9 51 68.6
Gohir.D05G021700 Gossypium hirsutum HOM05D006405 ORTHO05D007943 1.7e-10 70.5 67 55.2
Gorai.009G022000 Gossypium raimondii HOM05D006405 ORTHO05D007943 1.7e-10 70.5 67 55.2
Gohir.A05G020600 Gossypium hirsutum HOM05D006405 ORTHO05D007943 2.2e-10 70.1 67 53.7
Hund09164 Selenicereus undatus HOM05D006405 ORTHO05D007943 2.2e-10 70.1 64 50.0
Glyma.05G011400 Glycine max HOM05D006405 ORTHO05D007943 2.9e-10 69.7 64 56.2
Sc08g0006960 Simmondsia chinensis HOM05D006405 ORTHO05D007943 2.9e-10 69.7 60 55.0
vmacro23165 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 5.0e-10 68.9 50 70.0
arahy.Tifrunner.gnm1.ann1.K7UYF7 Arachis hypogaea HOM05D006405 ORTHO05D007943 6.5e-10 68.6 63 52.4
Lalb_Chr23g0275181 Lupinus albus HOM05D006405 ORTHO05D007943 8.5e-10 68.2 49 65.3
AUR62033428 Chenopodium quinoa HOM05D006405 ORTHO05D007943 1.1e-09 67.8 64 51.6
Lsat_1_v5_gn_7_42660 Lactuca sativa HOM05D006405 ORTHO05D007943 1.5e-09 67.4 61 52.5
PSO170G5697 Papaver somniferum HOM05D006405 ORTHO05D007943 1.5e-09 67.4 53 58.5
Sed0007503 Sechium edule HOM05D006405 ORTHO05D007943 1.5e-09 67.4 51 66.7
arahy.Tifrunner.gnm1.ann1.1782J0 Arachis hypogaea HOM05D006405 ORTHO05D007943 1.9e-09 67.0 63 50.8
VMungo1215G0522 Vigna mungo HOM05D006405 ORTHO05D007943 1.9e-09 67.0 51 58.8
ECA240G0175 Erigeron canadensis HOM05D006405 ORTHO05D007943 2.5e-09 66.6 63 50.8
MELO3C004534.2 Cucumis melo HOM05D006405 ORTHO05D007943 3.2e-09 66.2 51 64.7
TPR.G26771 Trifolium pratense HOM05D006405 ORTHO05D007943 3.2e-09 66.2 64 54.7
Zm00001eb240430 Zea mays HOM05D006405 ORTHO05D007943 3.2e-09 66.2 59 50.8
MSTRG.10623 Avicennia marina HOM05D006405 ORTHO05D007943 4.2e-09 65.9 54 55.6
Medtr4g113150 Medicago truncatula HOM05D006405 ORTHO05D007943 9.4e-09 64.7 64 56.2
Actinidia07446 Actinidia chinensis HOM05D006405 ORTHO05D007943 1.6e-08 63.9 38 81.6
CANSAT56G0349 Cannabis sativa HOM05D006405 ORTHO05D007943 1.6e-08 63.9 65 56.9
Zm00001eb205490 Zea mays HOM05D006405 ORTHO05D007943 1.6e-08 63.9 59 49.2
Psat4g042200 Pisum sativum HOM05D006405 ORTHO05D007943 2.1e-08 63.5 64 53.1
AUR62011052 Chenopodium quinoa HOM05D006405 ORTHO05D007943 4.7e-08 62.4 65 50.8
HanXRQChr03g0062171 Helianthus annuus HOM05D006405 ORTHO05D007943 3.0e-07 59.7 59 50.8
CsaV3_2G002560 Cucumis sativus L. HOM05D006405 ORTHO05D007943 4.0e-07 59.3 45 64.4
Glyma.17G119500 Glycine max HOM05D006405 ORTHO05D007943 5.2e-07 58.9 64 50.0
HPP92_008701 Vanilla planifolia HOM05D006405 ORTHO05D007943 5.2e-07 58.9 58 50.0
Aqoxy7G01949 Aquilegia oxysepala HOM05D006405 ORTHO05D007943 1.2e-06 57.8 67 49.3
Nitab4.5_0000432g0020 Nicotiana tabacum HOM05D006405 ORTHO05D007943 1.5e-06 57.4 51 52.9
Sabra18G0062700 Salix brachista HOM05D006405 ORTHO05D007943 1.5e-06 57.4 37 70.3
A03p09720 Brassica napus HOM05D006405 ORTHO05D007943 2.6e-06 56.6 62 45.2
BraA03t10288Z Brassica rapa HOM05D006405 ORTHO05D007943 2.6e-06 56.6 62 45.2
A02p05930 Brassica napus HOM05D006405 ORTHO05D007943 9.8e-06 54.7 57 47.4
BraA02t05545Z Brassica rapa HOM05D006405 ORTHO05D007943 9.8e-06 54.7 57 47.4
Ca_21716_v3 Cicer arietinum L. HOM05D006405 ORTHO05D007943 9.8e-06 54.7 60 48.3
Nitab4.5_0001719g0050 Nicotiana tabacum HOM05D006405 ORTHO05D007943 9.8e-06 54.7 51 51.0


User provided reference genes

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