Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 8.4e-103 377.1 199 100.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.7e-55 219.9 173 73.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.9e-54 216.5 179 72.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.9e-52 208.8 177 70.1
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 5.2e-52 208.4 176 69.3
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.4e-51 205.3 174 66.7
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.7e-51 204.1 175 69.7
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.7e-50 203.4 174 68.4
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 4.1e-49 198.7 177 67.2
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-48 197.2 174 67.2
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 5.9e-48 194.9 178 64.0
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 2.2e-47 193.0 177 65.5
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 8.5e-47 191.0 177 62.7
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 3.2e-46 189.1 178 66.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.7e-45 186.0 179 63.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.7e-45 186.0 180 65.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.6e-45 185.7 176 60.2
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.6e-45 185.7 174 63.8
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.7e-45 185.3 179 60.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 6.1e-45 184.9 174 64.9
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 6.1e-45 184.9 181 60.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.3e-44 183.0 177 63.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 3.0e-44 182.6 175 62.3
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.0e-44 182.6 175 61.7
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 4.0e-44 182.2 136 74.3
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 5.2e-44 181.8 138 72.5
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 6.7e-44 181.4 179 58.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 6.7e-44 181.4 179 64.2
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 8.8e-44 181.0 178 61.8
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.2e-43 180.6 183 61.7
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-43 180.6 175 62.3
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.5e-43 180.3 181 60.2
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.5e-43 180.3 177 60.5
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.0e-43 179.9 178 61.2
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.3e-43 179.1 177 58.8
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 3.3e-43 179.1 178 63.5
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.3e-43 179.1 175 62.3
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 4.4e-43 178.7 174 60.9
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.7e-42 176.8 175 61.1
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.7e-42 176.8 177 61.0
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.2e-42 176.4 178 59.6
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 4.8e-42 175.3 177 63.3
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.8e-42 175.3 173 60.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 6.3e-42 174.9 178 59.6
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 6.3e-42 174.9 175 62.3
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.1e-41 174.1 173 61.3
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.8e-41 173.3 177 62.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.1e-41 172.6 178 61.2
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 4.1e-41 172.2 176 59.1
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 7.0e-41 171.4 175 61.1
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 7.0e-41 171.4 179 60.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 2.0e-40 169.9 178 60.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 3.5e-40 169.1 156 60.9
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.5e-40 169.1 177 59.9
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.0e-39 167.5 179 59.8
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.7e-39 166.8 171 57.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.7e-39 166.8 172 57.0
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 2.2e-39 166.4 176 59.7
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 3.8e-39 165.6 175 60.0
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.9e-38 163.3 173 56.1
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.9e-38 163.3 174 58.0
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.9e-38 163.3 174 58.6
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.9e-38 163.3 177 58.2
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 5.5e-38 161.8 175 60.6
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 7.2e-38 161.4 176 58.5
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.4e-38 161.0 179 56.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 9.4e-38 161.0 175 57.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 6.1e-37 158.3 175 56.6
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.8e-36 156.8 179 55.9
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.0e-36 155.6 162 57.4
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.4e-35 152.1 180 56.1
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 9.8e-35 151.0 186 49.5
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.3e-34 150.6 174 53.4
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.3e-34 150.6 179 57.0
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.3e-34 150.6 175 57.7
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 4.8e-34 148.7 174 54.6
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 4.8e-34 148.7 136 61.8
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.1e-33 147.5 177 55.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 5.4e-33 145.2 189 51.3
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.4e-33 145.2 174 53.4
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 5.4e-33 145.2 133 63.2
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-32 144.1 157 53.5
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.6e-32 143.7 197 48.2
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.0e-32 143.3 183 52.5
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.5e-32 142.5 157 52.9
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.5e-32 142.5 157 52.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.9e-32 141.7 157 52.9
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.0e-31 141.0 195 50.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 2.5e-30 136.3 112 66.1
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.2e-30 136.0 89 79.8
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 7.2e-30 134.8 177 52.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 9.5e-30 134.4 158 53.8
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 9.5e-30 134.4 89 78.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.6e-29 133.7 116 62.1
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.1e-29 133.3 158 53.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.8e-29 132.9 158 53.2
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.7e-29 132.1 176 51.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 6.1e-29 131.7 90 75.6
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 6.1e-29 131.7 90 75.6
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 6.1e-29 131.7 158 52.5
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 6.1e-29 131.7 159 52.2
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.0e-28 131.0 161 53.4
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.4e-28 130.6 157 52.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.0e-28 129.0 86 75.6
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.0e-28 129.0 86 75.6
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 8.8e-28 127.9 176 47.7
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 7.5e-27 124.8 169 48.5
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 9.8e-27 124.4 104 63.5
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.3e-26 124.0 75 84.0
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.1e-25 119.4 115 59.1
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 3.1e-25 119.4 88 67.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.6e-24 117.1 163 46.6
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-20 103.6 75 72.0
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 4.0e-20 102.4 100 58.0
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.1e-17 92.4 110 49.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.6e-16 90.5 86 54.7
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.3e-14 82.4 85 49.4
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 4.7e-13 79.0 86 50.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.2e-12 75.5 69 58.0
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.2e-11 74.3 171 35.1
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.5e-11 73.9 85 47.1
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 4.4e-11 72.4 68 55.9
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-08 63.5 64 59.4


User provided reference genes

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