Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36464 Davidia involucrata HOM05D005830 ORTHO05D007212 5.7e-254 880.6 485 100.0
Dinv41459 Davidia involucrata HOM05D005830 ORTHO05D007212 2.9e-173 612.5 396 82.8
Hma1.2p1_0497F.1_g166530 Hydrangea macrophylla HOM05D005830 ORTHO05D007212 2.2e-149 533.1 411 73.0
vmacro06159 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 6.9e-143 511.5 398 69.1
TAR636G3280 Trochodendron aralioides HOM05D005830 ORTHO05D007212 3.8e-141 505.8 401 67.3
Manes.06G045500 Manihot esculenta HOM05D005830 ORTHO05D007212 2.1e-139 500.0 399 67.4
QL02p090253 Quercus lobata HOM05D005830 ORTHO05D007212 7.9e-139 498.0 408 67.4
CiPaw.04G176400 Carya illinoinensis HOM05D005830 ORTHO05D007212 2.3e-138 496.5 397 67.5
CiPaw.03G250100 Carya illinoinensis HOM05D005830 ORTHO05D007212 3.0e-138 496.1 401 66.1
TAR625G0228 Trochodendron aralioides HOM05D005830 ORTHO05D007212 1.3e-136 490.7 401 66.8
Prupe.7G250400 Prunus persica HOM05D005830 ORTHO05D007212 1.7e-136 490.3 402 65.9
TWI63G1326 Tripterygium wilfordii HOM05D005830 ORTHO05D007212 1.7e-136 490.3 399 66.4
Atru.chr7.1975 Acer truncatum HOM05D005830 ORTHO05D007212 3.7e-136 489.2 401 66.8
Ciclev10008496m.g Citrus clementina HOM05D005830 ORTHO05D007212 4.8e-136 488.8 401 65.8
Haze_25480 Corylus avellana HOM05D005830 ORTHO05D007212 8.2e-136 488.0 402 66.2
Potri.018G123400 Populus trichocarpa HOM05D005830 ORTHO05D007212 1.8e-135 486.9 399 67.9
Potri.006G063600 Populus trichocarpa HOM05D005830 ORTHO05D007212 3.1e-135 486.1 396 67.4
Cfa002293 Carpinus fangiana HOM05D005830 ORTHO05D007212 4.1e-135 485.7 402 66.4
ClCG06G011670 Citrullus lanatus HOM05D005830 ORTHO05D007212 4.1e-135 485.7 401 65.1
Nn8g39584 Nelumbo nucifera HOM05D005830 ORTHO05D007212 2.6e-134 483.0 401 66.1
Nn2g12145 Nelumbo nucifera HOM05D005830 ORTHO05D007212 5.9e-134 481.9 401 65.6
CsaV3_1G027980 Cucumis sativus L. HOM05D005830 ORTHO05D007212 3.8e-133 479.2 407 63.6
Sabra06G0046300 Salix brachista HOM05D005830 ORTHO05D007212 4.2e-132 475.7 398 65.8
Lj9A701G52 Lonicera japonica HOM05D005830 ORTHO05D007212 9.4e-132 474.6 395 67.6
CANSAT11G0221 Cannabis sativa HOM05D005830 ORTHO05D007212 8.0e-131 471.5 412 63.1
MD02G1021100 Malus domestica HOM05D005830 ORTHO05D007212 1.4e-130 470.7 398 66.3
RcHm_v2.0_Chr2g0087391 Rosa chinensis HOM05D005830 ORTHO05D007212 6.7e-130 468.4 400 62.5
GSVIVG01012831001 Vitis vinifera HOM05D005830 ORTHO05D007212 1.1e-129 467.6 400 65.0
Sed0009357 Sechium edule HOM05D005830 ORTHO05D007212 3.3e-129 466.1 396 63.4
Duzib150G0784 Durio zibethinus HOM05D005830 ORTHO05D007212 4.4e-129 465.7 399 64.9
Sabra18G0105100 Salix brachista HOM05D005830 ORTHO05D007212 5.7e-129 465.3 399 66.2
Aqoxy7G03615 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 1.7e-128 463.8 404 61.9
MELO3C010295.2 Cucumis melo HOM05D005830 ORTHO05D007212 1.7e-128 463.8 401 61.3
EL10Ac8g18756 Beta vulgaris HOM05D005830 ORTHO05D007212 4.1e-127 459.1 404 65.8
Gorai.009G015000 Gossypium raimondii HOM05D005830 ORTHO05D007212 4.1e-127 459.1 401 63.1
Sc08g0006200 Simmondsia chinensis HOM05D005830 ORTHO05D007212 2.0e-126 456.8 403 63.5
Nitab4.5_0000704g0010 Nicotiana tabacum HOM05D005830 ORTHO05D007212 4.5e-126 455.7 403 62.8
Gohir.D05G014900 Gossypium hirsutum HOM05D005830 ORTHO05D007212 5.9e-126 455.3 401 63.1
Manes.14G117500 Manihot esculenta HOM05D005830 ORTHO05D007212 5.9e-126 455.3 394 62.4
FAN28G1643 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.3e-125 454.1 399 61.7
FAN23G1789 Fragaria x ananassa HOM05D005830 ORTHO05D007212 5.0e-125 452.2 399 61.4
Ah.09g224370 Amaranthus hybridus HOM05D005830 ORTHO05D007212 8.5e-125 451.4 402 62.7
Nitab4.5_0002267g0050 Nicotiana tabacum HOM05D005830 ORTHO05D007212 1.1e-124 451.1 402 61.4
AUR62013287 Chenopodium quinoa HOM05D005830 ORTHO05D007212 3.2e-124 449.5 410 63.4
Thecc.09G135000 Theobroma cacao HOM05D005830 ORTHO05D007212 5.5e-124 448.7 399 63.2
Gohir.A05G013800 Gossypium hirsutum HOM05D005830 ORTHO05D007212 7.2e-124 448.4 401 62.3
Cpa.g.sc46.60 Carica papaya HOM05D005830 ORTHO05D007212 3.6e-123 446.0 399 63.2
FvH4_1g02430 Fragaria vesca HOM05D005830 ORTHO05D007212 6.1e-123 445.3 399 60.7
FAN19G1317 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.1e-123 445.3 399 60.7
Eucgr.C00582 Eucalyptus grandis HOM05D005830 ORTHO05D007212 1.2e-121 441.0 404 61.6
MD15G1164200 Malus domestica HOM05D005830 ORTHO05D007212 7.5e-121 438.3 397 62.7
Peaxi162Scf00088g00106 Petunia axillaris HOM05D005830 ORTHO05D007212 9.7e-121 438.0 410 59.3
COL.COLO4_15558 Corchorus olitorius HOM05D005830 ORTHO05D007212 4.8e-120 435.6 401 60.6
arahy.Tifrunner.gnm1.ann1.N1L3G9 Arachis hypogaea HOM05D005830 ORTHO05D007212 8.2e-120 434.9 404 61.6
Lalb_Chr13g0301421 Lupinus albus HOM05D005830 ORTHO05D007212 2.4e-119 433.3 399 61.4
DCAR_020892 Daucus carota HOM05D005830 ORTHO05D007212 1.2e-115 421.0 403 62.5
PGR142G1093 Punica granatum HOM05D005830 ORTHO05D007212 1.2e-115 421.0 400 58.8
Lsat_1_v5_gn_5_93541 Lactuca sativa HOM05D005830 ORTHO05D007212 7.5e-113 411.8 399 57.9
MBI14_g38128_MAGBIO Magnolia biondii HOM05D005830 ORTHO05D007212 5.4e-111 405.6 403 55.6
CAN.G1382.7 Capsicum annuum HOM05D005830 ORTHO05D007212 1.0e-109 401.4 442 51.8
Cc06_g07840 Coffea canephora HOM05D005830 ORTHO05D007212 2.5e-108 396.7 403 55.6
Glyma.17G109300 Glycine max HOM05D005830 ORTHO05D007212 4.7e-107 392.5 400 57.2
HanXRQChr10g0314411 Helianthus annuus HOM05D005830 ORTHO05D007212 4.0e-106 389.4 405 55.8
Phvul.003G170800 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 4.0e-106 389.4 400 57.2
HanXRQChr12g0356861 Helianthus annuus HOM05D005830 ORTHO05D007212 5.7e-105 385.6 403 55.3
VMungo1215G0722 Vigna mungo HOM05D005830 ORTHO05D007212 2.8e-104 383.3 400 56.8
Sopen07g003650 Solanum pennellii HOM05D005830 ORTHO05D007212 1.2e-102 377.9 365 58.4
PGSC0003DMG400030680 Solanum tuberosum HOM05D005830 ORTHO05D007212 1.2e-102 377.9 370 62.4
Solyc07g007660.1 Solanum lycopersicum HOM05D005830 ORTHO05D007212 1.0e-101 374.8 365 57.8
Ca_21656_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 6.0e-94 349.0 393 52.7
Aqoxy4G01850 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 1.5e-92 344.4 302 60.6
TPR.G956 Trifolium pratense HOM05D005830 ORTHO05D007212 4.3e-92 342.8 390 51.5
Lj4g0000922 Lotus japonicus HOM05D005830 ORTHO05D007212 5.6e-92 342.4 412 51.2
Dinv05006 Davidia involucrata HOM05D005830 ORTHO05D007212 2.8e-91 340.1 402 49.0
CiPaw.07G225200 Carya illinoinensis HOM05D005830 ORTHO05D007212 8.0e-91 338.6 404 49.0
CiPaw.08G009900 Carya illinoinensis HOM05D005830 ORTHO05D007212 5.2e-90 335.9 396 49.7
QL02p021141 Quercus lobata HOM05D005830 ORTHO05D007212 1.5e-89 334.3 407 47.9
MSTRG.10652 Avicennia marina HOM05D005830 ORTHO05D007212 2.6e-89 333.6 407 50.1
vmacro05164 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 3.7e-88 329.7 400 48.2
Rhsim03G0252000 Rhododendron simsii HOM05D005830 ORTHO05D007212 1.9e-87 327.4 268 67.9
Psat4g036280 Pisum sativum HOM05D005830 ORTHO05D007212 4.1e-87 326.2 390 49.0
AUR62011200 Chenopodium quinoa HOM05D005830 ORTHO05D007212 2.1e-86 323.9 320 57.5
Cfa013122 Carpinus fangiana HOM05D005830 ORTHO05D007212 2.7e-86 323.6 400 46.0
Gorai.009G059500 Gossypium raimondii HOM05D005830 ORTHO05D007212 4.6e-86 322.8 400 47.5
Gohir.D05G058400 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.0e-85 321.6 400 47.2
Medtr4g115690 Medicago truncatula HOM05D005830 ORTHO05D007212 5.0e-85 319.3 365 51.2
Prupe.1G483400 Prunus persica HOM05D005830 ORTHO05D007212 5.0e-85 319.3 403 46.9
Rhsim07G0159800 Rhododendron simsii HOM05D005830 ORTHO05D007212 1.1e-84 318.2 400 47.2
Ciclev10010445m.g Citrus clementina HOM05D005830 ORTHO05D007212 7.3e-84 315.5 396 46.5
COL.COLO4_18887 Corchorus olitorius HOM05D005830 ORTHO05D007212 1.6e-83 314.3 398 45.7
Manes.16G124200 Manihot esculenta HOM05D002641 ORTHO05D001537 1.6e-83 314.3 401 46.6
Oeu052743.1 Olea europaea HOM05D005830 ORTHO05D007212 4.7e-83 312.8 398 46.0
Medtr3g106630 Medicago truncatula HOM05D005830 ORTHO05D007212 1.5e-81 307.8 398 46.7
TPR.G3136 Trifolium pratense HOM05D005830 ORTHO05D007212 2.6e-81 307.0 393 46.8
Sabra06G0201100 Salix brachista HOM05D005830 ORTHO05D007212 2.2e-80 303.9 403 45.4
Lalb_Chr11g0063651 Lupinus albus HOM05D005830 ORTHO05D007212 8.3e-80 302.0 406 44.6
Thecc.09G021700 Theobroma cacao HOM05D005830 ORTHO05D007212 5.4e-79 299.3 404 44.3
Ca_15753_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 7.1e-79 298.9 395 45.6
Psat5g029840 Pisum sativum HOM05D005830 ORTHO05D007212 1.6e-78 297.7 393 46.1
MD15G1128100 Malus domestica HOM05D005830 ORTHO05D007212 1.7e-77 294.3 406 45.6
Oeu056965.1 Olea europaea HOM05D005830 ORTHO05D007212 1.7e-77 294.3 361 46.5
Potri.006G256900 Populus trichocarpa HOM05D005830 ORTHO05D007212 5.1e-77 292.7 401 45.6
Actinidia26367 Actinidia chinensis HOM05D005830 ORTHO05D007212 8.6e-77 292.0 402 49.5
Lj1g0023135 Lotus japonicus HOM05D005830 ORTHO05D007212 8.6e-77 292.0 392 46.9
RcHm_v2.0_Chr6g0297551 Rosa chinensis HOM05D005830 ORTHO05D007212 5.6e-76 289.3 402 44.3
FvH4_2g28800 Fragaria vesca HOM05D005830 ORTHO05D007212 9.5e-76 288.5 402 43.8
VMungo1309G0557 Vigna mungo HOM05D005830 ORTHO05D007212 1.6e-75 287.7 395 44.8
FAN24G0474 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.6e-75 286.6 402 43.8
FAN27G1157 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.6e-75 286.6 402 43.3
FAN15G2262 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.1e-74 285.0 402 43.5
Migut.K00413 Erythranthe guttata HOM05D005830 ORTHO05D007212 1.8e-74 284.3 410 47.3
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 2.6e-73 280.4 308 51.6
Glyma.04G065400 Glycine max HOM05D005830 ORTHO05D007212 5.8e-73 279.3 394 45.2
arahy.Tifrunner.gnm1.ann1.TZG1XT Arachis hypogaea HOM05D000451 ORTHO05D000351 7.6e-73 278.9 354 46.6
Eucgr.C02754 Eucalyptus grandis HOM05D005830 ORTHO05D007212 1.3e-72 278.1 399 45.9
FAN20G1042 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.7e-72 277.7 402 42.8
Phvul.009G091500 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 2.2e-72 277.3 408 43.4
ATR0800G042 Amborella trichopoda HOM05D005830 ORTHO05D007212 3.8e-72 276.6 396 45.2
SalBow1G4219 Salvia bowleyana HOM05D005830 ORTHO05D007212 1.6e-70 271.2 402 43.3
Sc06g0000560 Simmondsia chinensis HOM05D005830 ORTHO05D007212 8.7e-69 265.4 394 40.6
Actinidia14593 Actinidia chinensis HOM05D000485 ORTHO05D000341 5.6e-68 262.7 317 46.7
unitig_0.g2712 Utricularia gibba HOM05D005830 ORTHO05D007212 2.6e-65 253.8 402 40.8
EL10Ac2g04187 Beta vulgaris HOM05D005830 ORTHO05D007212 1.3e-61 241.5 294 46.6
Ah.16g104630 Amaranthus hybridus HOM05D000524 ORTHO05D000381 1.3e-59 235.0 297 46.8
SEGI_15152 Sequoiadendron giganteum HOM05D005830 ORTHO05D007212 1.2e-54 218.4 464 35.3
HPP92_010549 Vanilla planifolia HOM05D005830 ORTHO05D007212 7.9e-54 215.7 390 39.2
FAN26G3009 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.2e-51 206.1 177 62.1
AUR62012424 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.2e-49 201.8 401 35.7
Medtr4g014150 Medicago truncatula HOM05D005830 ORTHO05D007212 1.0e-40 172.2 266 41.7
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 1.3e-40 171.8 148 64.2
AUR62031547 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.5e-36 158.3 252 37.7
Lj7P437T13 Lonicera japonica HOM05D005830 ORTHO05D007212 2.2e-32 144.4 177 51.4
HPP92_027271 Vanilla planifolia HOM05D005830 ORTHO05D007212 1.4e-29 135.2 178 43.3
Glyma.16G087650 Glycine max HOM05D005830 ORTHO05D007212 1.1e-26 125.6 178 44.4
Glyma.06G066550 Glycine max HOM05D005830 ORTHO05D007212 7.7e-25 119.4 117 53.8
Haze_21491 Corylus avellana HOM05D005830 ORTHO05D007212 5.0e-24 116.7 172 39.5
Glyma.01G070700 Glycine max HOM05D002723 ORTHO05D003240 1.5e-20 105.1 125 48.8
CANSAT11G0844 Cannabis sativa HOM05D002008 ORTHO05D002054 4.2e-15 87.0 103 48.5
VMungo1309G2190 Vigna mungo HOM05D005830 ORTHO05D026219 1.1e-10 72.4 72 45.8
Glyma.13G162000 Glycine max HOM05D005830 ORTHO05D007212 1.7e-08 65.1 94 50.0


User provided reference genes

Program Settings