Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36454 Davidia involucrata HOM05D000018 ORTHO05D183464 2.4e-50 201.8 101 100.0
GSVIVG01012842001 Vitis vinifera HOM05D000018 ORTHO05D001040 4.1e-13 78.2 138 34.8
Actinidia07340 Actinidia chinensis HOM05D000018 ORTHO05D001040 2.6e-12 75.5 124 37.1
Hma1.2p1_0343F.1_g130820 Hydrangea macrophylla HOM05D000018 ORTHO05D001040 2.9e-11 72.0 128 37.5
Cpa.g.sc277.8 Carica papaya HOM05D000018 ORTHO05D001040 3.8e-11 71.6 140 32.9
Rhsim01G0050400 Rhododendron simsii HOM05D000018 ORTHO05D001040 5.0e-11 71.2 125 35.2
Haze_25457 Corylus avellana HOM05D000018 ORTHO05D001040 6.5e-11 70.9 134 34.3
Cfa002277 Carpinus fangiana HOM05D000018 ORTHO05D001040 1.9e-10 69.3 128 34.4
Rhsim01G0055600 Rhododendron simsii HOM05D000018 ORTHO05D001040 2.5e-10 68.9 125 33.6
QL02p090427 Quercus lobata HOM05D000018 ORTHO05D001040 3.2e-10 68.6 135 34.8
QL02p090461 Quercus lobata HOM05D000018 ORTHO05D001040 3.2e-10 68.6 135 34.8
vmacro07743 Vaccinium macrocarpon HOM05D000018 ORTHO05D001040 3.2e-10 68.6 125 34.4
Thecc.09G136300 Theobroma cacao HOM05D000018 ORTHO05D001040 5.5e-10 67.8 138 34.8
CSS0028792 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001040 1.2e-09 66.6 132 34.1
Sc08g0006080 Simmondsia chinensis HOM05D000018 ORTHO05D001040 6.1e-09 64.3 55 56.4
Nitab4.5_0002759g0050 Nicotiana tabacum HOM05D000018 ORTHO05D001040 1.0e-08 63.5 81 45.7
Rhsim01G0056800 Rhododendron simsii HOM05D000018 ORTHO05D001040 1.0e-08 63.5 126 33.3
MD02G1020000 Malus domestica HOM05D000018 ORTHO05D001040 1.4e-08 63.2 127 32.3
Sabra18G0102200 Salix brachista HOM05D000018 ORTHO05D001040 1.4e-08 63.2 124 32.3
Nitab4.5_0002091g0030 Nicotiana tabacum HOM05D000018 ORTHO05D001040 2.3e-08 62.4 54 57.4
Rhsim01G0056200 Rhododendron simsii HOM05D000018 ORTHO05D001040 2.3e-08 62.4 126 32.5
Rhsim01G0058400 Rhododendron simsii HOM05D000018 ORTHO05D001040 2.3e-08 62.4 126 32.5
THA.LOC104811014 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 2.3e-08 62.4 126 31.7
TAR626G0401 Trochodendron aralioides HOM05D000018 ORTHO05D001040 3.0e-08 62.0 55 56.4
Gohir.A08G089600 Gossypium hirsutum HOM05D000018 ORTHO05D001040 4.0e-08 61.6 69 46.4
QL02p090439 Quercus lobata HOM05D000018 ORTHO05D001040 4.0e-08 61.6 131 32.1
QL02p090453 Quercus lobata HOM05D000018 ORTHO05D001040 4.0e-08 61.6 149 31.5
FAN26G3202 Fragaria x ananassa HOM05D000018 ORTHO05D001040 8.8e-08 60.5 82 43.9
DCAR_003585 Daucus carota HOM05D000018 ORTHO05D001040 1.1e-07 60.1 124 30.6
TAR625G1192 Trochodendron aralioides HOM05D000018 ORTHO05D001040 1.1e-07 60.1 140 35.0
Oeu053520.1 Olea europaea HOM05D000018 ORTHO05D001040 1.5e-07 59.7 55 56.4
Hund21587 Selenicereus undatus HOM05D000018 ORTHO05D001040 1.5e-07 59.7 82 43.9
COL.COLO4_33379 Corchorus olitorius HOM05D000018 ORTHO05D001040 2.0e-07 59.3 69 43.5
FAN23G0676 Fragaria x ananassa HOM05D000018 ORTHO05D001040 2.0e-07 59.3 54 53.7
MSTRG.26332 Avicennia marina HOM05D000018 ORTHO05D001040 2.6e-07 58.9 55 52.7
Oeu047252.1 Olea europaea HOM05D000018 ORTHO05D001040 2.6e-07 58.9 55 54.5
Potri.018G121700 Populus trichocarpa HOM05D000018 ORTHO05D001040 2.6e-07 58.9 54 48.1
Prupe.4G248300 Prunus persica HOM05D000018 ORTHO05D001040 2.6e-07 58.9 82 45.1
EL10Ac8g18765 Beta vulgaris HOM05D000018 ORTHO05D001040 3.3e-07 58.5 55 52.7
BraA02t06125Z Brassica rapa HOM05D000018 ORTHO05D001040 3.3e-07 58.5 58 51.7
CiPaw.03G251500 Carya illinoinensis HOM05D000018 ORTHO05D001040 3.3e-07 58.5 90 42.2
FvH4_1g02152 Fragaria vesca HOM05D000018 ORTHO05D001040 3.3e-07 58.5 82 42.7
FAN19G1332 Fragaria x ananassa HOM05D000018 ORTHO05D001040 3.3e-07 58.5 82 42.7
Sabra06G0045000 Salix brachista HOM05D000018 ORTHO05D001040 3.3e-07 58.5 54 50.0
CAN.G351.5 Capsicum annuum HOM05D000018 ORTHO05D001040 4.4e-07 58.2 81 42.0
Duzib168G1972 Durio zibethinus HOM05D000018 ORTHO05D001040 4.4e-07 58.2 138 32.6
FAN19G3133 Fragaria x ananassa HOM05D000018 ORTHO05D001040 4.4e-07 58.2 82 42.7
Gohir.D08G100900 Gossypium hirsutum HOM05D000018 ORTHO05D001040 4.4e-07 58.2 69 44.9
Gorai.004G108800 Gossypium raimondii HOM05D000018 ORTHO05D001040 4.4e-07 58.2 69 44.9
Oeu052738.1 Olea europaea HOM05D000018 ORTHO05D001040 4.4e-07 58.2 61 47.5
Phvul.003G171600 Phaseolus vulgaris HOM05D000018 ORTHO05D001040 4.4e-07 58.2 132 32.6
Prupe.4G248200 Prunus persica HOM05D000018 ORTHO05D001040 4.4e-07 58.2 54 53.7
QL02p090497 Quercus lobata HOM05D000018 ORTHO05D001040 4.4e-07 58.2 55 50.9
GSVIVG01012846001 Vitis vinifera HOM05D000018 ORTHO05D001040 4.4e-07 58.2 74 43.2
Actinidia21929 Actinidia chinensis HOM05D000018 ORTHO05D001040 5.7e-07 57.8 124 31.5
Cfa002276 Carpinus fangiana HOM05D000018 ORTHO05D001040 5.7e-07 57.8 55 50.9
FAN28G1708 Fragaria x ananassa HOM05D000018 ORTHO05D001040 5.7e-07 57.8 82 42.7
FAN28G2805 Fragaria x ananassa HOM05D000018 ORTHO05D001040 5.7e-07 57.8 82 40.2
Oeu052737.1 Olea europaea HOM05D000018 ORTHO05D001040 5.7e-07 57.8 55 52.7
SalBow1G6756 Salvia bowleyana HOM05D000018 ORTHO05D001040 5.7e-07 57.8 54 51.9
Lj4g0015759 Lotus japonicus HOM05D000018 ORTHO05D001040 7.5e-07 57.4 55 50.9
Manes.06G045000 Manihot esculenta HOM05D000018 ORTHO05D001040 7.5e-07 57.4 54 50.0
Peaxi162Scf00079g02322 Petunia axillaris HOM05D000018 ORTHO05D001040 7.5e-07 57.4 54 51.9
Peaxi162Scf00088g00818 Petunia axillaris HOM05D000018 ORTHO05D001040 7.5e-07 57.4 55 54.5
Prupe.4G248400 Prunus persica HOM05D000018 ORTHO05D001040 7.5e-07 57.4 54 53.7
PGR142G1094 Punica granatum HOM05D000018 ORTHO05D001040 7.5e-07 57.4 55 52.7
A02p10600 Brassica napus HOM05D000018 ORTHO05D001040 9.7e-07 57.0 58 50.0
CiPaw.03G251300 Carya illinoinensis HOM05D000018 ORTHO05D001040 9.7e-07 57.0 90 41.1
AUR62011217 Chenopodium quinoa HOM05D000018 ORTHO05D001040 9.7e-07 57.0 55 52.7
Potri.006G062500 Populus trichocarpa HOM05D000018 ORTHO05D001040 9.7e-07 57.0 54 46.3
ClCG06G011810 Citrullus lanatus HOM05D000018 ORTHO05D001040 1.3e-06 56.6 55 52.7
Manes.14G118500 Manihot esculenta HOM05D000018 ORTHO05D001040 1.3e-06 56.6 128 31.2
Prupe.4G248600 Prunus persica HOM05D000018 ORTHO05D001040 1.3e-06 56.6 54 51.9
SHI28905 Sapria himalayana HOM05D000018 ORTHO05D001040 1.3e-06 56.6 55 50.9
TPR.G7994 Trifolium pratense HOM05D000018 ORTHO05D001040 1.3e-06 56.6 55 50.9
FvH4_1g02150 Fragaria vesca HOM05D000018 ORTHO05D001040 1.7e-06 56.2 82 39.0
Potri.018G121800 Populus trichocarpa HOM05D000018 ORTHO05D001040 1.7e-06 56.2 124 33.9
GSVIVG01012845001 Vitis vinifera HOM05D000018 ORTHO05D001040 1.7e-06 56.2 55 49.1
Oeu034325.1 Olea europaea HOM05D000018 ORTHO05D001040 2.2e-06 55.8 55 50.9
Prupe.4G248100 Prunus persica HOM05D000018 ORTHO05D001040 2.2e-06 55.8 54 50.0
RcHm_v2.0_Chr2g0087201 Rosa chinensis HOM05D000018 ORTHO05D001040 2.2e-06 55.8 69 42.0
RcHm_v2.0_Chr2g0087211 Rosa chinensis HOM05D000018 ORTHO05D001040 2.2e-06 55.8 69 42.0
RcHm_v2.0_Chr2g0087261 Rosa chinensis HOM05D000018 ORTHO05D001040 2.2e-06 55.8 54 50.0
Hund21589 Selenicereus undatus HOM05D000018 ORTHO05D001040 2.2e-06 55.8 54 50.0
Actinidia38712 Actinidia chinensis HOM05D000018 ORTHO05D001040 2.8e-06 55.5 52 50.0
CiPaw.03G251600 Carya illinoinensis HOM05D000018 ORTHO05D001040 2.8e-06 55.5 56 51.8
CiPaw.03G251800 Carya illinoinensis HOM05D000018 ORTHO05D001040 2.8e-06 55.5 55 52.7
COL.COLO4_33378 Corchorus olitorius HOM05D000018 ORTHO05D001040 2.8e-06 55.5 84 40.5
FvH4_1g02151 Fragaria vesca HOM05D000018 ORTHO05D001040 2.8e-06 55.5 69 43.5
FAN28G1112 Fragaria x ananassa HOM05D000018 ORTHO05D001040 2.8e-06 55.5 83 39.8
FAN28G2339 Fragaria x ananassa HOM05D000018 ORTHO05D001040 2.8e-06 55.5 69 43.5
MD14G1108700 Malus domestica HOM05D000018 ORTHO05D001040 2.8e-06 55.5 55 54.5
RcHm_v2.0_Chr6g0295511 Rosa chinensis HOM05D000018 ORTHO05D001040 2.8e-06 55.5 94 36.2
Sed0015551 Sechium edule HOM05D000018 ORTHO05D001040 2.8e-06 55.5 55 50.9
TWI74G0958 Tripterygium wilfordii HOM05D000018 ORTHO05D001040 2.8e-06 55.5 133 29.3
AUR62011218 Chenopodium quinoa HOM05D000018 ORTHO05D001040 3.7e-06 55.1 55 49.1
Glyma.04G008567 Glycine max HOM05D000018 ORTHO05D001040 3.7e-06 55.1 81 42.0
Medtr8g074070 Medicago truncatula HOM05D000018 ORTHO05D001040 3.7e-06 55.1 54 50.0
Phvul.009G003500 Phaseolus vulgaris HOM05D000018 ORTHO05D001040 3.7e-06 55.1 55 50.9
Sabra18G0102300 Salix brachista HOM05D000018 ORTHO05D001040 3.7e-06 55.1 55 50.9
Sopen10g036180 Solanum pennellii HOM05D000018 ORTHO05D001040 3.7e-06 55.1 54 50.0
Thecc.09G136400 Theobroma cacao HOM05D000018 ORTHO05D001040 3.7e-06 55.1 69 43.5
AUR62013264 Chenopodium quinoa HOM05D000018 ORTHO05D001040 4.8e-06 54.7 55 47.3
FvH4_1g02112 Fragaria vesca HOM05D000018 ORTHO05D001040 4.8e-06 54.7 83 39.8
FAN19G1752 Fragaria x ananassa HOM05D000018 ORTHO05D001040 4.8e-06 54.7 83 39.8
MD02G1019700 Malus domestica HOM05D000018 ORTHO05D001040 4.8e-06 54.7 54 50.0
Haze_25455 Corylus avellana HOM05D000018 ORTHO05D001040 6.3e-06 54.3 92 41.3
Duzib150G0951 Durio zibethinus HOM05D000018 ORTHO05D001040 6.3e-06 54.3 55 49.1
Eucgr.C00494 Eucalyptus grandis HOM05D000018 ORTHO05D001040 6.3e-06 54.3 128 29.7
Lj9A703T42 Lonicera japonica HOM05D000018 ORTHO05D001040 6.3e-06 54.3 129 30.2
Prupe.7G251800 Prunus persica HOM05D000018 ORTHO05D001040 6.3e-06 54.3 56 50.0
SalBow1G6684 Salvia bowleyana HOM05D000018 ORTHO05D001040 6.3e-06 54.3 55 50.9
Sed0022722 Sechium edule HOM05D000018 ORTHO05D001040 6.3e-06 54.3 86 38.4
Solyc10g086780.2 Solanum lycopersicum HOM05D000018 ORTHO05D001040 6.3e-06 54.3 54 50.0
Cfa002273 Carpinus fangiana HOM05D000018 ORTHO05D001040 8.2e-06 53.9 55 52.7
CsaV3_1G028310 Cucumis sativus L. HOM05D000018 ORTHO05D001040 8.2e-06 53.9 55 45.5
Eucgr.C00322 Eucalyptus grandis HOM05D000018 ORTHO05D001040 8.2e-06 53.9 130 30.8
Eucgr.C00492 Eucalyptus grandis HOM05D000018 ORTHO05D001040 8.2e-06 53.9 55 50.9
FvH4_1g02121 Fragaria vesca HOM05D000018 ORTHO05D001040 8.2e-06 53.9 54 46.3
FAN19G0251 Fragaria x ananassa HOM05D000018 ORTHO05D001040 8.2e-06 53.9 54 46.3
FAN28G1873 Fragaria x ananassa HOM05D000018 ORTHO05D001040 8.2e-06 53.9 54 46.3
Lalb_Chr11g0072301 Lupinus albus HOM05D000018 ORTHO05D001040 8.2e-06 53.9 135 29.6
Prupe.7G251700 Prunus persica HOM05D000018 ORTHO05D001040 8.2e-06 53.9 55 49.1
PGSC0003DMG400019186 Solanum tuberosum HOM05D000018 ORTHO05D001040 8.2e-06 53.9 54 50.0


User provided reference genes

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