Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 2.3e-207 725.3 358 100.0
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 3.0e-143 512.3 296 83.1
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 8.7e-143 510.8 301 81.4
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 4.1e-140 501.9 276 85.1
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 3.8e-138 495.4 294 82.0
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 1.2e-136 490.3 297 78.5
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 3.6e-136 488.8 297 80.1
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 1.0e-135 487.3 295 80.0
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 5.1e-135 485.0 294 78.9
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 8.7e-135 484.2 292 78.8
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.3e-134 481.9 271 84.5
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 7.4e-134 481.1 272 85.7
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 1.4e-132 476.9 293 79.2
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 9.1e-132 474.2 294 77.9
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 2.0e-131 473.0 306 76.5
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 2.0e-131 473.0 282 79.8
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 3.4e-131 472.2 294 77.6
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 7.7e-131 471.1 301 75.4
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 6.5e-130 468.0 298 77.9
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 6.5e-130 468.0 297 74.7
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 6.5e-130 468.0 297 74.7
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 1.4e-129 466.8 278 79.9
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 2.5e-129 466.1 294 76.9
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 7.2e-129 464.5 308 75.3
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 9.4e-129 464.2 237 94.1
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 1.6e-128 463.4 294 74.5
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 7.9e-128 461.1 293 76.1
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 1.8e-127 459.9 278 79.5
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 2.3e-127 459.5 279 80.3
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 3.0e-127 459.1 285 76.1
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.0e-127 459.1 277 79.1
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 1.5e-126 456.8 294 76.2
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 2.6e-126 456.1 277 78.7
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 2.6e-126 456.1 292 75.0
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 5.7e-126 454.9 297 73.4
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 1.3e-125 453.8 300 74.3
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 1.3e-125 453.8 297 74.4
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 2.2e-125 453.0 284 77.8
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.8e-125 452.6 294 75.2
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 2.8e-125 452.6 294 74.8
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 4.8e-125 451.8 293 74.4
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 8.2e-125 451.1 279 79.2
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 1.1e-124 450.7 275 77.5
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 1.4e-124 450.3 292 75.0
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 1.8e-124 449.9 283 78.8
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 9.1e-124 447.6 287 76.3
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 1.5e-123 446.8 301 72.4
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 5.9e-123 444.9 298 75.2
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 5.9e-123 444.9 295 75.3
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 5.9e-123 444.9 292 74.0
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 7.7e-123 444.5 292 73.3
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 7.7e-123 444.5 300 74.0
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 1.7e-122 443.4 288 73.3
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 2.2e-122 443.0 284 76.4
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 2.9e-122 442.6 300 71.3
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 5.0e-122 441.8 297 72.1
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 6.5e-122 441.4 295 74.9
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 8.5e-122 441.0 301 72.4
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 1.1e-121 440.7 294 72.4
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.9e-121 439.9 300 71.0
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 2.5e-121 439.5 264 79.2
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 3.2e-121 439.1 297 71.4
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 9.4e-121 437.6 295 74.2
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 1.2e-120 437.2 263 79.1
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 2.7e-120 436.0 289 73.0
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 8.0e-120 434.5 296 71.6
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.4e-119 433.7 304 70.7
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 1.4e-119 433.7 301 70.4
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 2.3e-119 433.0 289 72.7
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 1.1e-118 430.6 247 86.6
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 3.3e-118 429.1 279 74.2
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 3.3e-118 429.1 295 70.2
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 1.3e-117 427.2 256 78.5
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 1.7e-117 426.8 302 70.5
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 4.8e-117 425.2 276 72.1
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 6.3e-117 424.9 274 73.4
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 8.2e-117 424.5 227 87.2
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.0e-114 417.5 304 65.1
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 8.5e-114 414.5 298 65.4
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 9.4e-113 411.0 272 71.0
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 2.3e-111 406.4 243 82.3
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 5.2e-111 405.2 279 73.8
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 3.3e-110 402.5 278 72.3
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.1e-105 387.5 233 80.3
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 5.5e-105 385.2 214 85.5
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 1.6e-104 383.6 386 51.6
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 4.7e-104 382.1 296 65.2
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 1.3e-101 374.0 315 61.9
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 2.2e-101 373.2 319 61.4
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 1.1e-100 370.9 290 60.3
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 3.8e-98 362.5 244 70.9
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 3.8e-98 362.5 290 59.3
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 3.3e-97 359.4 217 78.8
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 4.2e-97 359.0 299 60.2
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 8.0e-96 354.8 285 58.9
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 3.4e-94 349.4 286 58.0
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 1.1e-92 344.4 290 58.3
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 4.1e-92 342.4 228 70.6
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 1.7e-90 337.0 283 57.6
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 1.2e-88 330.9 297 56.2
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 1.6e-88 330.5 297 56.2
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 2.1e-88 330.1 290 56.6
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 3.6e-88 329.3 299 55.5
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 3.6e-88 329.3 299 55.5
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 3.6e-88 329.3 299 55.5
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 8.0e-88 328.2 272 58.8
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 2.3e-87 326.6 279 57.3
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 3.0e-87 326.2 297 55.6
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.5e-86 323.9 214 72.0
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 2.0e-86 323.6 244 63.1
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 3.4e-86 322.8 299 54.2
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 5.8e-86 322.0 261 59.8
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 9.2e-84 314.7 270 61.9
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 1.5e-81 307.4 281 54.4
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 1.4e-76 290.8 260 55.8
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 1.6e-72 277.3 229 56.8
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 2.2e-69 266.9 213 59.6
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 1.9e-68 263.8 285 51.2
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 3.1e-63 246.5 277 48.4
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 8.9e-63 245.0 199 58.8
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 6.0e-59 232.3 234 51.3
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.0e-58 231.5 208 61.1
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 5.6e-57 225.7 162 66.0
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 2.4e-55 220.3 231 48.9
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 2.1e-43 180.6 121 70.2
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 4.3e-41 172.9 270 38.9
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 2.2e-37 160.6 128 57.8
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.5e-33 147.1 97 77.3
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 4.2e-28 129.8 212 34.4
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-23 113.2 108 56.5
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 1.0e-21 108.6 78 65.4
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 3.2e-20 103.6 158 36.1
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 2.1e-19 100.9 158 37.3
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 1.1e-17 95.1 55 76.4
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 5.7e-17 92.8 98 53.1
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 3.7e-16 90.1 48 89.6
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 9.1e-15 85.5 43 86.0
CARHR217150 Cardamine hirsuta HOM05D005541 ORTHO05D006875 1.7e-08 64.7 59 54.2
FvH4_1g02060 Fragaria vesca HOM05D005541 ORTHO05D006875 4.1e-07 60.1 40 57.5
Cfa024351 Carpinus fangiana HOM05D005541 ORTHO05D124727 1.2e-06 58.5 235 25.1


User provided reference genes

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