Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36402 Davidia involucrata HOM05D001098 ORTHO05D002527 1.5e-33 145.6 75 100.0
Nitab4.5_0001003g0090 Nicotiana tabacum HOM05D001098 ORTHO05D002527 1.5e-07 59.3 29 93.1
Nitab4.5_0009631g0030 Nicotiana tabacum HOM05D001098 ORTHO05D002527 1.5e-07 59.3 29 93.1
GSVIVG01023864001 Vitis vinifera HOM05D001098 ORTHO05D002527 1.5e-07 59.3 62 54.8
Actinidia17990 Actinidia chinensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Actinidia20579 Actinidia chinensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Aa31sc18G70 Aethionema arabicum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
AL7G15820 Arabidopsis lyrata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
arahy.Tifrunner.gnm1.ann1.1X8DY6 Arachis hypogaea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
arahy.Tifrunner.gnm1.ann1.5U49GI Arachis hypogaea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
arahy.Tifrunner.gnm1.ann1.7NF1VE Arachis hypogaea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
arahy.Tifrunner.gnm1.ann1.N1X7B2 Arachis hypogaea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
MSTRG.16957 Avicennia marina HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
EL10Ac9g21546 Beta vulgaris HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BcaB03g12410 Brassica carinata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BcaC01g00493 Brassica carinata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BcaNung02390 Brassica carinata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BcaNung06457 Brassica carinata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
A01p03220 Brassica napus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
A03p63540 Brassica napus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
A08p21890 Brassica napus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
C03p80640 Brassica napus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
C07p61120 Brassica napus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BolC1t00347H Brassica oleracea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BolC3t20307H Brassica oleracea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BolC7t46536H Brassica oleracea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BraA01t00307Z Brassica rapa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BraA03t15424Z Brassica rapa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
BraA08t34142Z Brassica rapa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CSS0035199 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CANSAT25G0204 Cannabis sativa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Carub.0007s0496 Capsella rubella HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CAN.G321.15 Capsicum annuum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CARHR243660 Cardamine hirsuta HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Cpa.g.sc1440.1 Carica papaya HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CiPaw.05G093900 Carya illinoinensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
CiPaw.06G114700 Carya illinoinensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
AUR62010182 Chenopodium quinoa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
AUR62013184 Chenopodium quinoa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Ciclev10028748m.g Citrus clementina HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
COL.COLO4_34319 Corchorus olitorius HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Haze_01974 Corylus avellana HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Haze_10071 Corylus avellana HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
DCAR_006385 Daucus carota HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Dinv41864 Davidia involucrata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Duzib248G0955 Durio zibethinus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
ECA233G3688 Erigeron canadensis HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Migut.B00005 Erythranthe guttata HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Thhalv10025582m.g Eutrema salsugineum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
FvH4_2g16930 Fragaria vesca HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
FAN15G1608 Fragaria x ananassa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
FAN24G1038 Fragaria x ananassa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
FAN27G2361 Fragaria x ananassa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Gohir.A04G111700 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Gohir.D04G152000 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Gorai.012G138800 Gossypium raimondii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
HanXRQChr16g0515181 Helianthus annuus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Lsat_1_v5_gn_8_120701 Lactuca sativa HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Lj9A408T81 Lonicera japonica HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
MBI01_g17242_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
MBI01_g32424_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
MBI04_g31202_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Manes.02G204100 Manihot esculenta HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Manes.18G113200 Manihot esculenta HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Oeu050440.1 Olea europaea HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Peaxi162Scf00296g01213 Petunia axillaris HOM05D001098 ORTHO05D002527 1.9e-07 58.9 53 54.7
Prupe.8G181000 Prunus persica HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
PGR142G3259 Punica granatum HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Rhsim05G0044700 Rhododendron simsii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Sp7g33130 Schrenkiella parvula HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Hund06357 Selenicereus undatus HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Thecc.02G147100 Theobroma cacao HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
TWI75G1677 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
TWI79G1444 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.9e-07 58.9 28 92.9
TAR381G1518 Trochodendron aralioides HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
VMungo0647G1862 Vigna mungo HOM05D001098 ORTHO05D002527 1.9e-07 58.9 28 92.9
Cc09_g10880 Coffea canephora HOM05D001098 ORTHO05D002527 2.5e-07 58.5 37 70.3
Oeu012219.1 Olea europaea HOM05D001098 ORTHO05D002527 2.5e-07 58.5 28 89.3
RcHm_v2.0_Chr6g0281071 Rosa chinensis HOM05D001098 ORTHO05D002527 2.5e-07 58.5 28 89.3
Solyc11g008590.2 Solanum lycopersicum HOM05D001098 ORTHO05D002527 2.5e-07 58.5 28 89.3
Sopen11g004380 Solanum pennellii HOM05D001098 ORTHO05D002527 2.5e-07 58.5 28 89.3
PGSC0003DMG400016250 Solanum tuberosum HOM05D001098 ORTHO05D002527 2.5e-07 58.5 28 89.3
Hma1.2p1_0032F.1_g018710 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 4.2e-07 57.8 28 89.3
Medtr5g099280 Medicago truncatula HOM05D001098 ORTHO05D002527 4.2e-07 57.8 28 89.3
Rhsim11G0198300 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.2e-07 57.8 28 89.3
Ah.01g017660 Amaranthus hybridus HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Ca_06505_v3 Cicer arietinum L. HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Glyma.02G312000 Glycine max HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Glyma.14G000600 Glycine max HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
LjContig00081g0022408 Lotus japonicus HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Lalb_Chr10g0107701 Lupinus albus HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
PSO541G0403 Papaver somniferum HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
PSO675G9097 Papaver somniferum HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Phvul.008G292800 Phaseolus vulgaris HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Psat2g000520 Pisum sativum HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
SalBow1G7648 Salvia bowleyana HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
SalBow7G2674 Salvia bowleyana HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Sc08g0002100 Simmondsia chinensis HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
TPR.G18630 Trifolium pratense HOM05D001098 ORTHO05D002527 5.5e-07 57.4 28 89.3
Atru.chr5.3569 Acer truncatum HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
ClCG02G010830 Citrullus lanatus HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
MELO3C013485.2 Cucumis melo HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
CsaV3_6G010050 Cucumis sativus L. HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
Eucgr.I01538 Eucalyptus grandis HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 89.3
MD05G1141000 Malus domestica HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
MD11G1242300 Malus domestica HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
Nn6g31647 Nelumbo nucifera HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 89.3
Potri.016G113200 Populus trichocarpa HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 89.3
Sabra16G0108800 Salix brachista HOM05D000241 ORTHO05D001001 7.2e-07 57.0 28 89.3
Sed0023457 Sechium edule HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
Sed0023927 Sechium edule HOM05D001098 ORTHO05D002527 7.2e-07 57.0 28 85.7
Os07g0573700 Oryza sativa ssp. japonica HOM05D001098 ORTHO05D002527 9.4e-07 56.6 28 89.3
HPP92_015755 Vanilla planifolia HOM05D001098 ORTHO05D002527 9.4e-07 56.6 28 89.3
Gohir.A13G064400 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.2e-06 56.2 28 89.3
vmacro02343 Vaccinium macrocarpon HOM05D001098 ORTHO05D002527 1.6e-06 55.8 26 96.2
Zm00001eb325140 Zea mays HOM05D001098 ORTHO05D002527 2.1e-06 55.5 38 68.4
ATR0057G016 Amborella trichopoda HOM05D001098 ORTHO05D002527 2.7e-06 55.1 28 85.7
CDE10G0149 Ceratophyllum demersum HOM05D001098 ORTHO05D002527 2.7e-06 55.1 28 85.7
SMO118G0063 Selaginella moellendorffii HOM05D001098 ORTHO05D002527 2.7e-06 55.1 38 65.8
Zm00001eb412040 Zea mays HOM05D001098 ORTHO05D002527 2.7e-06 55.1 28 85.7
Aqoxy2G01309 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 3.6e-06 54.7 28 85.7
Aqoxy6G01547 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 3.6e-06 54.7 28 85.7
MD05G1140500 Malus domestica HOM05D001098 ORTHO05D002527 3.6e-06 54.7 28 82.1
SEGI_11233 Sequoiadendron giganteum HOM05D001098 ORTHO05D002527 3.6e-06 54.7 28 85.7
Zm00001eb137090 Zea mays HOM05D001098 ORTHO05D002648 3.6e-06 54.7 28 85.7
Aqoxy3G04159 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 4.7e-06 54.3 28 85.7
AagrBONN_evm.TU.Sc2ySwM_368.1241 Anthoceros agrestis HOM05D001098 ORTHO05D002527 8.0e-06 53.5 68 41.2
CBR_g38158 Chara braunii HOM05D001098 ORTHO05D000301 8.0e-06 53.5 28 82.1


User provided reference genes

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