Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 2.1e-180 635.6 321 100.0
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 2.5e-149 532.3 316 82.0
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 3.5e-143 511.9 317 79.8
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 4.6e-143 511.5 312 82.4
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.8e-143 510.8 317 80.4
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.8e-143 510.8 317 80.4
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 7.3e-141 504.2 317 77.9
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 2.8e-140 502.3 317 77.3
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 6.2e-140 501.1 317 77.9
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 2.4e-139 499.2 315 78.4
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 3.1e-139 498.8 317 78.2
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 9.0e-139 497.3 314 78.0
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.0e-138 496.1 312 79.8
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 3.4e-138 495.4 317 77.9
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 4.4e-138 495.0 317 77.6
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 9.9e-138 493.8 317 77.9
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 1.7e-137 493.0 313 77.0
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 2.2e-137 492.7 317 75.7
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 8.4e-137 490.7 317 75.7
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 1.9e-136 489.6 317 76.0
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 3.2e-136 488.8 317 76.7
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 3.2e-136 488.8 312 78.8
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 4.6e-135 485.0 310 76.8
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 7.8e-135 484.2 318 76.7
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 7.8e-135 484.2 317 74.1
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 1.0e-134 483.8 318 73.0
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 2.3e-134 482.6 314 76.4
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 3.0e-134 482.3 317 73.5
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 3.9e-134 481.9 313 76.7
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 5.1e-134 481.5 313 74.8
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 5.1e-134 481.5 313 74.8
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 8.7e-134 480.7 312 77.2
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 9.6e-133 477.2 315 74.6
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 2.1e-132 476.1 315 76.2
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 2.8e-132 475.7 313 76.4
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 3.6e-132 475.3 315 74.0
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 8.1e-132 474.2 313 75.7
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 3.1e-131 472.2 320 75.6
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 3.1e-131 472.2 313 75.7
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 9.0e-131 470.7 317 73.8
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 1.5e-130 469.9 312 74.0
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 2.6e-130 469.2 313 75.4
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 2.6e-130 469.2 317 73.5
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 2.2e-129 466.1 317 75.1
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 1.1e-128 463.8 343 70.6
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 2.4e-128 462.6 312 73.1
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 7.1e-128 461.1 311 74.6
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 7.1e-128 461.1 311 72.7
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 1.6e-127 459.9 311 73.0
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 2.1e-127 459.5 309 73.1
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 2.7e-127 459.1 311 73.0
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 2.7e-127 459.1 313 72.2
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 3.5e-127 458.8 317 70.7
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 3.5e-127 458.8 317 72.2
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 3.5e-127 458.8 315 73.7
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.0e-126 457.2 316 73.4
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 2.3e-126 456.1 313 72.5
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 3.0e-126 455.7 315 72.4
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 3.9e-126 455.3 313 73.2
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 8.7e-126 454.1 313 72.2
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 1.1e-125 453.8 313 71.6
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 1.5e-125 453.4 316 72.5
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 1.3e-124 450.3 313 71.2
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 3.7e-124 448.7 316 70.9
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 6.9e-123 444.5 312 71.2
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 1.5e-122 443.4 309 71.5
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.4e-122 442.2 315 70.2
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.4e-122 442.2 315 70.5
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 5.8e-122 441.4 309 70.9
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 1.7e-121 439.9 309 71.2
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 2.9e-121 439.1 309 70.2
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 1.4e-120 436.8 350 63.7
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 2.1e-119 433.0 315 68.9
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 1.8e-118 429.9 431 57.1
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 3.0e-118 429.1 320 70.6
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 8.7e-118 427.6 310 65.8
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 7.4e-117 424.5 313 65.8
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 6.2e-116 421.4 279 74.6
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 9.0e-115 417.5 327 66.1
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 1.2e-114 417.2 312 68.3
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 3.4e-114 415.6 315 68.3
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 1.3e-113 413.7 331 64.7
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 4.6e-111 405.2 316 63.6
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 6.0e-111 404.8 314 66.2
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 2.3e-110 402.9 316 63.6
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 3.3e-109 399.1 316 63.0
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 1.9e-104 383.3 311 66.2
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 3.2e-104 382.5 315 64.1
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 2.5e-101 372.9 310 58.4
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 2.2e-92 343.2 314 60.2
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 3.7e-92 342.4 293 63.8
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 4.8e-92 342.0 209 77.0
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 4.1e-91 339.0 215 76.3
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 3.5e-90 335.9 214 75.2
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.4e-88 330.5 315 49.5
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 2.7e-87 326.2 207 74.9
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 5.0e-81 305.4 317 46.7
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.2e-80 301.6 340 45.0
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 2.1e-79 300.1 310 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 2.0e-77 293.5 310 46.8
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 2.0e-77 293.5 201 69.7
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 7.0e-75 285.0 295 53.9
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 2.7e-74 283.1 318 47.5
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 3.2e-72 276.2 309 45.0
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 7.0e-67 258.5 310 41.6
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.5e-64 250.8 313 42.8
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 2.5e-64 250.0 153 77.8
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.0e-62 244.6 318 40.9
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.2e-50 204.5 149 72.5
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 1.9e-48 197.2 148 67.6
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 7.5e-45 185.3 187 60.4
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 1.0e-41 174.9 213 49.8
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 4.1e-35 152.9 85 89.4
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 1.3e-33 147.9 333 32.1
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 9.6e-32 141.7 104 66.3
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 8.9e-30 135.2 101 66.3
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 9.9e-29 131.7 157 54.1
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 4.9e-28 129.4 114 62.3
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.6e-26 124.4 92 68.5
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 2.3e-25 120.6 88 75.0
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 6.6e-25 119.0 88 73.9
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 4.8e-23 112.8 256 30.1
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 4.8e-23 112.8 102 57.8
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.1e-19 101.7 97 60.8
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 2.1e-18 97.4 61 72.1
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 1.8e-14 84.3 85 55.3
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 3.1e-14 83.6 51 76.5
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 2.4e-11 73.9 56 62.5
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 9.6e-08 62.0 51 51.0
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 9.6e-08 62.0 51 51.0


User provided reference genes

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