Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 5.8e-144 514.2 262 100.0
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 1.1e-105 387.1 260 76.9
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 2.2e-98 362.8 256 77.3
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 9.0e-97 357.5 262 75.6
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 3.4e-96 355.5 261 75.1
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 7.7e-96 354.4 254 75.6
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 7.7e-96 354.4 261 75.1
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 8.5e-95 350.9 253 73.5
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 2.5e-94 349.4 253 73.1
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.2e-94 349.0 258 74.0
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 5.5e-94 348.2 262 72.5
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 7.2e-94 347.8 260 72.7
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 1.2e-93 347.1 254 74.0
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 1.6e-93 346.7 257 73.5
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 4.6e-93 345.1 256 73.8
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 4.6e-93 345.1 254 72.4
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.0e-92 344.0 256 74.2
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 1.4e-92 343.6 253 71.9
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 1.8e-92 343.2 254 72.4
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.8e-92 343.2 258 72.9
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.0e-92 342.4 259 73.0
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 3.9e-92 342.0 262 71.8
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 5.1e-92 341.7 261 71.3
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 8.8e-92 340.9 261 71.3
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 7.4e-91 337.8 255 70.6
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 7.4e-91 337.8 260 72.3
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 9.7e-91 337.4 255 75.3
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 4.8e-90 335.1 258 73.6
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 1.8e-89 333.2 254 70.5
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 1.8e-89 333.2 254 70.5
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 4.1e-89 332.0 253 73.5
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 6.9e-89 331.3 262 69.8
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 9.1e-89 330.9 255 71.4
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.5e-88 330.1 257 70.4
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 4.5e-88 328.6 207 79.7
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 1.3e-87 327.0 254 69.3
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 1.3e-87 327.0 254 69.3
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 1.7e-87 326.6 257 71.6
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 3.8e-87 325.5 261 69.3
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 6.5e-87 324.7 254 68.9
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 8.5e-87 324.3 256 68.8
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 1.1e-86 323.9 260 67.7
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.4e-86 323.6 193 81.9
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 1.4e-86 323.6 256 69.1
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 2.5e-86 322.8 254 67.7
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 2.5e-86 322.8 254 67.7
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 3.2e-86 322.4 259 67.6
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 4.2e-86 322.0 257 71.2
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 5.5e-86 321.6 254 71.3
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 1.2e-85 320.5 256 66.8
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 4.7e-85 318.5 256 68.8
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 1.0e-84 317.4 252 69.0
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 1.8e-84 316.6 258 66.7
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 2.3e-84 316.2 254 66.9
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 2.3e-84 316.2 256 66.4
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 3.0e-84 315.8 257 68.5
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 5.1e-84 315.1 260 65.8
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 8.8e-84 314.3 260 68.1
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 2.6e-83 312.8 262 67.6
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 4.8e-82 308.5 193 80.3
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 4.8e-82 308.5 254 70.5
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 6.3e-82 308.1 254 66.9
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 1.4e-81 307.0 254 66.5
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 1.8e-81 306.6 228 65.8
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 4.1e-81 305.4 254 67.3
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 5.3e-81 305.1 263 66.2
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 1.2e-80 303.9 263 67.7
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.5e-80 303.5 235 69.8
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 4.5e-80 302.0 253 65.2
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 7.7e-80 301.2 209 68.9
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 3.8e-79 298.9 263 63.1
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.0e-79 298.5 251 64.9
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 5.0e-79 298.5 251 64.9
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 4.2e-78 295.4 249 66.7
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 2.1e-77 293.1 264 62.9
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 2.1e-77 293.1 266 64.7
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 2.7e-77 292.7 206 75.2
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 3.6e-77 292.4 260 61.2
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 4.7e-77 292.0 258 65.5
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 3.9e-76 288.9 261 63.2
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 5.2e-76 288.5 268 61.9
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 1.1e-75 287.3 268 62.3
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 2.6e-75 286.2 268 61.6
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 9.7e-75 284.3 257 62.3
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 3.7e-74 282.3 270 61.5
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 3.7e-74 282.3 268 60.8
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 3.7e-74 282.3 268 61.9
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.1e-73 280.8 237 65.4
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.8e-73 280.0 268 60.8
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 9.1e-73 277.7 257 61.1
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 7.7e-72 274.6 239 63.6
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 2.2e-71 273.1 188 71.8
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 3.8e-71 272.3 266 60.2
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 3.8e-71 272.3 256 59.0
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 3.6e-69 265.8 251 57.0
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 6.1e-69 265.0 167 79.6
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 8.0e-69 264.6 157 87.3
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 1.0e-68 264.2 259 57.1
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 6.8e-68 261.5 247 63.6
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 3.4e-67 259.2 251 55.4
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 1.7e-66 256.9 230 60.4
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 3.7e-66 255.8 267 56.2
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 4.1e-65 252.3 229 59.4
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 4.5e-64 248.8 257 58.4
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 7.2e-62 241.5 176 65.9
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 1.2e-59 234.2 220 60.9
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 2.2e-58 229.9 142 81.7
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 2.0e-56 223.4 187 58.8
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 7.7e-56 221.5 265 54.3
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 3.3e-54 216.1 175 62.3
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 5.5e-54 215.3 188 63.8
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 7.8e-32 141.7 102 71.6
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 2.0e-27 127.1 97 68.0
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 4.9e-26 122.5 138 52.9
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 7.3e-22 108.6 71 73.2
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-17 92.8 122 42.6
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.7e-16 90.1 71 60.6
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-16 88.6 119 39.5
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 9.9e-11 71.6 111 44.1
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 9.9e-11 71.6 44 75.0
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.2e-09 66.6 98 44.9
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 3.5e-08 63.2 46 67.4


User provided reference genes

Program Settings