Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36275 Davidia involucrata HOM05D004381 ORTHO05D005200 9.4e-75 283.5 149 100.0
Dinv08032 Davidia involucrata HOM05D004381 ORTHO05D005200 3.3e-59 231.9 129 93.8
CiPaw.14G121000 Carya illinoinensis HOM05D004381 ORTHO05D005200 9.5e-59 230.3 129 92.2
Rhsim13G0223600 Rhododendron simsii HOM05D004381 ORTHO05D005200 1.6e-58 229.6 129 92.2
TAR623G1292 Trochodendron aralioides HOM05D004381 ORTHO05D005200 8.0e-58 227.3 129 91.5
Atru.chr3.2598 Acer truncatum HOM05D004381 ORTHO05D005200 1.8e-57 226.1 129 90.7
Migut.D00582 Erythranthe guttata HOM05D004381 ORTHO05D005200 2.3e-57 225.7 129 89.1
SGA_v2.0_scaffold247G44855 Striga asiatica HOM05D004381 ORTHO05D005200 3.0e-57 225.3 129 90.7
CSS0020783 Camellia sinensis var. sinensis HOM05D004381 ORTHO05D005200 4.0e-57 224.9 129 91.5
Oeu035739.1 Olea europaea HOM05D004381 ORTHO05D005200 5.2e-57 224.6 129 89.1
Haze_23102 Corylus avellana HOM05D004381 ORTHO05D005200 1.2e-56 223.4 129 89.1
Potri.001G018800 Populus trichocarpa HOM05D004381 ORTHO05D005200 1.2e-56 223.4 129 88.4
COL.COLO4_24848 Corchorus olitorius HOM05D004381 ORTHO05D005200 1.5e-56 223.0 129 89.1
Actinidia16315 Actinidia chinensis HOM05D004381 ORTHO05D005200 2.6e-56 222.2 129 88.4
Cc06_g22560 Coffea canephora HOM05D004381 ORTHO05D005200 2.6e-56 222.2 129 87.6
Cfa009743 Carpinus fangiana HOM05D004381 ORTHO05D005200 3.4e-56 221.9 129 88.4
Ca_01288_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 4.4e-56 221.5 129 86.8
Lsat_1_v5_gn_6_48200 Lactuca sativa HOM05D004381 ORTHO05D005200 4.4e-56 221.5 129 87.6
MSTRG.21391 Avicennia marina HOM05D004381 ORTHO05D005200 1.3e-55 219.9 129 87.6
Glyma.13G340900 Glycine max HOM05D004381 ORTHO05D005200 1.3e-55 219.9 129 86.0
Sabra01G0013400 Salix brachista HOM05D004381 ORTHO05D005200 1.7e-55 219.5 129 86.8
Thecc.09G228300 Theobroma cacao HOM05D004381 ORTHO05D005200 2.2e-55 219.2 129 89.1
Duzib150G0594 Durio zibethinus HOM05D004381 ORTHO05D005200 2.9e-55 218.8 129 86.8
Solyc11g062020.2 Solanum lycopersicum HOM05D004381 ORTHO05D005200 2.9e-55 218.8 129 87.6
Sopen11g023990 Solanum pennellii HOM05D004381 ORTHO05D005200 2.9e-55 218.8 129 87.6
CiPaw.13G163200 Carya illinoinensis HOM05D004381 ORTHO05D005200 3.7e-55 218.4 129 86.0
FAN16G2672 Fragaria x ananassa HOM05D004381 ORTHO05D005200 3.7e-55 218.4 129 86.8
RcHm_v2.0_Chr5g0077111 Rosa chinensis HOM05D004381 ORTHO05D005200 3.7e-55 218.4 129 86.0
Manes.06G166500 Manihot esculenta HOM05D004381 ORTHO05D005200 4.9e-55 218.0 129 87.6
Sc06g0004510 Simmondsia chinensis HOM05D004381 ORTHO05D005200 6.4e-55 217.6 129 89.9
FvH4_3g43050 Fragaria vesca HOM05D004381 ORTHO05D005200 8.3e-55 217.2 129 86.0
FAN11G3745 Fragaria x ananassa HOM05D004381 ORTHO05D005200 8.3e-55 217.2 129 86.0
Gorai.004G018900 Gossypium raimondii HOM05D004381 ORTHO05D005200 8.3e-55 217.2 129 88.4
ECA233G0542 Erigeron canadensis HOM05D004381 ORTHO05D005200 1.1e-54 216.9 129 84.5
Lalb_Chr22g0352331 Lupinus albus HOM05D004381 ORTHO05D005200 1.1e-54 216.9 129 86.0
CANSAT35G1357 Cannabis sativa HOM05D004381 ORTHO05D005200 1.4e-54 216.5 129 85.3
FAN21G3999 Fragaria x ananassa HOM05D004381 ORTHO05D005200 1.8e-54 216.1 129 86.0
Gohir.A08G013200 Gossypium hirsutum HOM05D004381 ORTHO05D005200 1.8e-54 216.1 129 88.4
Phvul.L011443 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 1.8e-54 216.1 129 84.5
Glyma.15G033500 Glycine max HOM05D004381 ORTHO05D005200 2.4e-54 215.7 129 84.5
Nitab4.5_0002026g0030 Nicotiana tabacum HOM05D004381 ORTHO05D005200 3.2e-54 215.3 129 86.0
Prupe.6G023700 Prunus persica HOM05D004381 ORTHO05D005200 3.2e-54 215.3 129 83.7
Gohir.D08G023600 Gossypium hirsutum HOM05D004381 ORTHO05D005200 4.1e-54 214.9 129 87.6
TPR.G6819 Trifolium pratense HOM05D004381 ORTHO05D005200 4.1e-54 214.9 129 84.5
Ciclev10016213m.g Citrus clementina HOM05D004381 ORTHO05D005200 7.0e-54 214.2 129 85.3
QL01p005255 Quercus lobata HOM05D004381 ORTHO05D005200 7.0e-54 214.2 129 86.0
HanXRQChr02g0056281 Helianthus annuus HOM05D004381 ORTHO05D005200 1.6e-53 213.0 129 84.5
Nitab4.5_0000492g0060 Nicotiana tabacum HOM05D004381 ORTHO05D005200 1.6e-53 213.0 129 84.5
Medtr2g098150 Medicago truncatula HOM05D004381 ORTHO05D005200 2.0e-53 212.6 129 83.7
Peaxi162Scf00029g02914 Petunia axillaris HOM05D004381 ORTHO05D005200 2.0e-53 212.6 129 84.5
Hund22064 Selenicereus undatus HOM05D004381 ORTHO05D005200 2.0e-53 212.6 129 85.3
THA.LOC104817902 Tarenaya hassleriana HOM05D004381 ORTHO05D005200 4.6e-53 211.5 129 83.7
GSVIVG01025302001 Vitis vinifera HOM05D004381 ORTHO05D005200 1.0e-52 210.3 129 84.5
MBI01_g27615_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 1.3e-52 209.9 129 83.7
arahy.Tifrunner.gnm1.ann1.E88S00 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.7e-52 209.5 127 85.0
MSTRG.18417 Avicennia marina HOM05D004381 ORTHO05D005200 1.7e-52 209.5 129 84.5
A05p27840 Brassica napus HOM05D004381 ORTHO05D005200 1.7e-52 209.5 129 82.2
BraA05t21671Z Brassica rapa HOM05D004381 ORTHO05D005200 1.7e-52 209.5 129 82.2
AUR62000098 Chenopodium quinoa HOM05D004381 ORTHO05D005200 1.7e-52 209.5 130 83.8
AUR62019272 Chenopodium quinoa HOM05D004381 ORTHO05D005200 1.7e-52 209.5 130 83.8
Sp3g18900 Schrenkiella parvula HOM05D004381 ORTHO05D005200 1.7e-52 209.5 129 82.2
Eucgr.J00789 Eucalyptus grandis HOM05D004381 ORTHO05D005200 2.3e-52 209.1 129 84.5
Potri.003G205100 Populus trichocarpa HOM05D004381 ORTHO05D005200 2.3e-52 209.1 129 82.9
Aqoxy7G00799 Aquilegia oxysepala HOM05D004381 ORTHO05D005200 3.9e-52 208.4 129 84.5
Sabra03G0151600 Salix brachista HOM05D004381 ORTHO05D005200 5.0e-52 208.0 129 80.6
Thhalv10021300m.g Eutrema salsugineum HOM05D004381 ORTHO05D005200 6.6e-52 207.6 129 81.4
AL3G34820 Arabidopsis lyrata HOM05D004381 ORTHO05D005200 1.1e-51 206.8 129 80.6
DCAR_031567 Daucus carota HOM05D004381 ORTHO05D005200 1.5e-51 206.5 129 82.9
PSO210G6888 Papaver somniferum HOM05D004381 ORTHO05D005200 1.5e-51 206.5 129 82.2
Migut.O00580 Erythranthe guttata HOM05D004381 ORTHO05D005200 1.9e-51 206.1 128 81.2
Lj3g0004330 Lotus japonicus HOM05D004381 ORTHO05D005200 1.9e-51 206.1 129 81.4
ClCG02G023360 Citrullus lanatus HOM05D004381 ORTHO05D005200 3.3e-51 205.3 129 86.0
MELO3C014607.2 Cucumis melo HOM05D004381 ORTHO05D005200 3.3e-51 205.3 129 84.5
Sed0000340 Sechium edule HOM05D004381 ORTHO05D005200 3.3e-51 205.3 129 86.0
Ah.06g193660 Amaranthus hybridus HOM05D004381 ORTHO05D005200 4.3e-51 204.9 130 82.3
PSO210G5188 Papaver somniferum HOM05D004381 ORTHO05D005200 4.3e-51 204.9 129 81.4
EL10Ac4g10297 Beta vulgaris HOM05D004381 ORTHO05D005200 5.6e-51 204.5 130 81.5
MSTRG.21390 Avicennia marina HOM05D004381 ORTHO05D005200 7.3e-51 204.1 129 81.4
CAN.G71.8 Capsicum annuum HOM05D004381 ORTHO05D005200 7.3e-51 204.1 135 79.3
Nn2g15439 Nelumbo nucifera HOM05D004381 ORTHO05D005200 9.5e-51 203.8 129 80.6
AT3G20870 Arabidopsis thaliana HOM05D004381 ORTHO05D005200 2.8e-50 202.2 129 79.1
VMungo1080G0554 Vigna mungo HOM05D004381 ORTHO05D005200 3.6e-50 201.8 153 71.2
MD11G1029400 Malus domestica HOM05D004381 ORTHO05D005200 1.4e-49 199.9 129 81.4
vmacro04193 Vaccinium macrocarpon HOM05D004381 ORTHO05D005200 3.1e-49 198.7 108 91.7
CARHR096750 Cardamine hirsuta HOM05D004381 ORTHO05D005200 5.2e-49 198.0 129 80.6
Os02g0196000 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 1.5e-48 196.4 129 78.3
BcaC05g28200 Brassica carinata HOM05D004381 ORTHO05D005200 4.4e-48 194.9 120 82.5
Phvul.011G058500 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 5.8e-48 194.5 130 79.2
C05p43180 Brassica napus HOM05D004381 ORTHO05D005200 7.5e-48 194.1 130 78.5
BolC5t33048H Brassica oleracea HOM05D004381 ORTHO05D005200 7.5e-48 194.1 130 78.5
arahy.Tifrunner.gnm1.ann1.LPI13M Arachis hypogaea HOM05D004381 ORTHO05D005200 1.3e-47 193.4 117 85.5
VMungo1127G1882 Vigna mungo HOM05D004381 ORTHO05D005200 6.4e-47 191.0 130 78.5
ATR0605G196 Amborella trichopoda HOM05D004381 ORTHO05D005200 8.3e-47 190.7 129 79.1
Lj3g0009499 Lotus japonicus HOM05D004381 ORTHO05D005200 8.3e-47 190.7 130 77.7
Aa31LG8G7690 Aethionema arabicum HOM05D004381 ORTHO05D005200 1.4e-46 189.9 132 79.5
MD03G1024300 Malus domestica HOM05D004381 ORTHO05D005200 1.9e-46 189.5 129 81.4
unitig_26.g10133 Utricularia gibba HOM05D004381 ORTHO05D005200 1.9e-46 189.5 129 74.4
HPP92_020510 Vanilla planifolia HOM05D004381 ORTHO05D005200 5.4e-46 188.0 129 78.3
Lalb_Chr19g0138141 Lupinus albus HOM05D004381 ORTHO05D005200 1.2e-45 186.8 130 76.2
TWI60G0262 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 2.0e-45 186.0 129 75.2
Medtr4g065640 Medicago truncatula HOM05D004381 ORTHO05D005200 6.0e-45 184.5 129 77.5
SEGI_07837 Sequoiadendron giganteum HOM05D004381 ORTHO05D005200 3.9e-44 181.8 130 72.3
Psat7g213080 Pisum sativum HOM05D004381 ORTHO05D005200 1.1e-43 180.3 129 72.1
MBI04_g13625_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 1.2e-42 176.8 120 75.0
arahy.Tifrunner.gnm1.ann1.T21L4I Arachis hypogaea HOM05D004381 ORTHO05D005200 2.1e-42 176.0 142 71.1
Carub.0003s2085 Capsella rubella HOM05D004381 ORTHO05D005200 1.1e-41 173.7 129 72.1
Zm00001eb205960 Zea mays HOM05D004381 ORTHO05D005200 1.1e-41 173.7 134 70.9
Nn7g36163 Nelumbo nucifera HOM05D004381 ORTHO05D005200 2.0e-40 169.5 111 81.1
Psat1g173960 Pisum sativum HOM05D004381 ORTHO05D005200 2.0e-40 169.5 94 86.2
arahy.Tifrunner.gnm1.ann1.H592TP Arachis hypogaea HOM05D004381 ORTHO05D005200 9.2e-38 160.6 101 82.2
CDE10G0019 Ceratophyllum demersum HOM05D004381 ORTHO05D005200 1.3e-36 156.8 110 70.0
Glyma.11G132500 Glycine max HOM05D004381 ORTHO05D005200 1.5e-35 153.3 94 83.0
Os08g0100200 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 6.2e-34 147.9 133 59.4
SMO347G0569 Selaginella moellendorffii HOM05D004381 ORTHO05D005200 2.4e-33 146.0 126 61.9
Zm00001eb213530 Zea mays HOM05D004381 ORTHO05D005200 2.4e-33 146.0 130 60.0
Duzib168G0673 Durio zibethinus HOM05D004381 ORTHO05D005200 2.6e-32 142.5 82 85.4
Rhsim13G0223400 Rhododendron simsii HOM05D004381 ORTHO05D005200 4.4e-32 141.7 80 88.8
Glyma.12G056900 Glycine max HOM05D004381 ORTHO05D005200 9.9e-32 140.6 94 76.6
Mapoly0039s0091 Marchantia polymorpha HOM05D004381 ORTHO05D005200 1.9e-30 136.3 129 53.5
CsaV3_4G024140 Cucumis sativus L. HOM05D004381 ORTHO05D005200 2.4e-30 136.0 82 81.7
Pp3c16_16530 Physcomitrium patens HOM05D004381 ORTHO05D005200 2.7e-29 132.5 135 55.6
HanXRQChr17g0534131 Helianthus annuus HOM05D004381 ORTHO05D005200 3.5e-29 132.1 98 69.4
TPR.G39903 Trifolium pratense HOM05D004381 ORTHO05D005200 3.5e-29 132.1 107 70.1
AagrBONN_evm.TU.Sc2ySwM_362.691 Anthoceros agrestis HOM05D004381 ORTHO05D005200 3.0e-28 129.0 133 56.4
Ca_20572_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 1.6e-26 123.2 102 65.7
Ca_30507_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 1.6e-26 123.2 102 65.7
Lj1A348T17 Lonicera japonica HOM05D004381 ORTHO05D005200 2.1e-26 122.9 92 69.6
arahy.Tifrunner.gnm1.ann1.BUZ3KN Arachis hypogaea HOM05D004381 ORTHO05D005200 8.4e-23 110.9 129 51.9
FAN25G0848 Fragaria x ananassa HOM05D004381 ORTHO05D005200 2.4e-22 109.4 140 51.4
arahy.Tifrunner.gnm1.ann1.N626J4 Arachis hypogaea HOM05D004381 ORTHO05D005200 9.3e-22 107.5 129 51.2
Psat5g287160 Pisum sativum HOM05D004381 ORTHO05D005200 5.3e-17 91.7 74 71.6
Cre03.g189550 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 4.3e-11 72.0 85 50.6


User provided reference genes

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