Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36273 Davidia involucrata HOM05D004381 ORTHO05D005200 3.6e-68 261.5 138 100.0
Cpa.g.sc84.75 Carica papaya HOM05D004381 ORTHO05D005200 5.3e-64 247.7 132 96.2
BcaC05g28200 Brassica carinata HOM05D004381 ORTHO05D005200 1.7e-62 242.7 135 92.6
SGA_v2.0_scaffold247G44855 Striga asiatica HOM05D004381 ORTHO05D005200 3.2e-61 238.4 129 96.1
Nn7g36163 Nelumbo nucifera HOM05D004381 ORTHO05D005200 3.3e-58 228.4 138 87.7
MBI04_g13625_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 9.7e-58 226.9 138 87.7
Glyma.11G132500 Glycine max HOM05D004381 ORTHO05D005200 1.3e-57 226.5 127 89.8
FAN25G0848 Fragaria x ananassa HOM05D004381 ORTHO05D005200 6.3e-57 224.2 138 85.5
Gohir.A08G013200 Gossypium hirsutum HOM05D004381 ORTHO05D005200 8.2e-57 223.8 138 85.5
Gohir.D08G023600 Gossypium hirsutum HOM05D004381 ORTHO05D005200 8.2e-57 223.8 138 85.5
Gorai.004G018900 Gossypium raimondii HOM05D004381 ORTHO05D005200 8.2e-57 223.8 138 85.5
Ciclev10016213m.g Citrus clementina HOM05D004381 ORTHO05D005200 1.8e-56 222.6 138 86.2
Manes.06G166500 Manihot esculenta HOM05D004381 ORTHO05D005200 2.4e-56 222.2 138 86.2
Potri.001G018800 Populus trichocarpa HOM05D004381 ORTHO05D005200 3.1e-56 221.9 138 85.5
GSVIVG01025302001 Vitis vinifera HOM05D004381 ORTHO05D005200 4.1e-56 221.5 138 85.5
CSS0020783 Camellia sinensis var. sinensis HOM05D004381 ORTHO05D005200 5.3e-56 221.1 138 84.1
Zm00001eb213530 Zea mays HOM05D004381 ORTHO05D005200 7.0e-56 220.7 135 83.7
COL.COLO4_24848 Corchorus olitorius HOM05D004381 ORTHO05D005200 1.2e-55 219.9 138 83.3
MD11G1029400 Malus domestica HOM05D004381 ORTHO05D005200 1.2e-55 219.9 138 84.1
QL01p005255 Quercus lobata HOM05D004381 ORTHO05D005200 1.2e-55 219.9 137 84.7
MSTRG.21391 Avicennia marina HOM05D004381 ORTHO05D005200 1.5e-55 219.5 138 84.8
MSTRG.18417 Avicennia marina HOM05D004381 ORTHO05D005200 2.0e-55 219.2 138 84.8
CiPaw.13G163200 Carya illinoinensis HOM05D004381 ORTHO05D005200 2.0e-55 219.2 138 84.8
MELO3C014607.2 Cucumis melo HOM05D004381 ORTHO05D005200 2.0e-55 219.2 138 84.8
Cc06_g22560 Coffea canephora HOM05D004381 ORTHO05D005200 2.6e-55 218.8 138 84.1
CsaV3_4G024140 Cucumis sativus L. HOM05D004381 ORTHO05D005200 2.6e-55 218.8 138 84.1
Migut.D00582 Erythranthe guttata HOM05D004381 ORTHO05D005200 2.6e-55 218.8 138 84.1
Glyma.15G033500 Glycine max HOM05D004381 ORTHO05D005200 2.6e-55 218.8 138 84.1
Thecc.09G228300 Theobroma cacao HOM05D004381 ORTHO05D005200 2.6e-55 218.8 138 83.3
Migut.O00580 Erythranthe guttata HOM05D004381 ORTHO05D005200 3.5e-55 218.4 138 84.1
Cfa009743 Carpinus fangiana HOM05D004381 ORTHO05D005200 4.5e-55 218.0 138 83.3
Aqoxy7G00799 Aquilegia oxysepala HOM05D004381 ORTHO05D005200 5.9e-55 217.6 138 83.3
Duzib150G0594 Durio zibethinus HOM05D004381 ORTHO05D005200 5.9e-55 217.6 138 83.3
Atru.chr3.2598 Acer truncatum HOM05D004381 ORTHO05D005200 7.7e-55 217.2 138 83.3
CDE10G0019 Ceratophyllum demersum HOM05D004381 ORTHO05D005200 7.7e-55 217.2 136 83.1
Phvul.L011443 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 7.7e-55 217.2 138 83.3
HanXRQChr02g0056281 Helianthus annuus HOM05D004381 ORTHO05D005200 1.0e-54 216.9 138 83.3
MD03G1024300 Malus domestica HOM05D004381 ORTHO05D005200 1.0e-54 216.9 138 82.6
CiPaw.14G121000 Carya illinoinensis HOM05D004381 ORTHO05D005200 1.3e-54 216.5 138 84.1
TPR.G6819 Trifolium pratense HOM05D004381 ORTHO05D005200 1.3e-54 216.5 138 82.6
TWI60G0262 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 1.3e-54 216.5 138 82.6
Glyma.13G340900 Glycine max HOM05D004381 ORTHO05D005200 1.7e-54 216.1 138 82.6
Potri.003G205100 Populus trichocarpa HOM05D004381 ORTHO05D005200 1.7e-54 216.1 138 82.6
Prupe.6G023700 Prunus persica HOM05D004381 ORTHO05D005200 1.7e-54 216.1 138 82.6
VMungo1080G0554 Vigna mungo HOM05D004381 ORTHO05D005200 2.2e-54 215.7 138 82.6
Lsat_1_v5_gn_6_48200 Lactuca sativa HOM05D004381 ORTHO05D005200 2.9e-54 215.3 138 82.6
Hund22064 Selenicereus undatus HOM05D004381 ORTHO05D005200 2.9e-54 215.3 138 81.9
Solyc11g062020.2 Solanum lycopersicum HOM05D004381 ORTHO05D005200 2.9e-54 215.3 138 83.3
Sopen11g023990 Solanum pennellii HOM05D004381 ORTHO05D005200 2.9e-54 215.3 138 83.3
Ca_01288_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 3.8e-54 214.9 138 81.9
Eucgr.J00789 Eucalyptus grandis HOM05D004381 ORTHO05D005200 3.8e-54 214.9 138 81.9
Lalb_Chr22g0352331 Lupinus albus HOM05D004381 ORTHO05D005200 3.8e-54 214.9 138 81.9
DCAR_031567 Daucus carota HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
FvH4_3g43050 Fragaria vesca HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
FAN11G3745 Fragaria x ananassa HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
FAN16G2672 Fragaria x ananassa HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
FAN21G3999 Fragaria x ananassa HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
Medtr2g098150 Medicago truncatula HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
RcHm_v2.0_Chr5g0077111 Rosa chinensis HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 81.9
TAR623G1292 Trochodendron aralioides HOM05D004381 ORTHO05D005200 5.0e-54 214.5 138 82.6
Duzib168G0673 Durio zibethinus HOM05D004381 ORTHO05D005200 6.5e-54 214.2 138 81.2
Lj3g0004330 Lotus japonicus HOM05D004381 ORTHO05D005200 6.5e-54 214.2 138 81.9
Os02g0196000 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 6.5e-54 214.2 138 81.9
Ah.06g193660 Amaranthus hybridus HOM05D004381 ORTHO05D005200 8.5e-54 213.8 138 81.9
CAN.G71.8 Capsicum annuum HOM05D004381 ORTHO05D005200 8.5e-54 213.8 138 82.6
Peaxi162Scf00029g02914 Petunia axillaris HOM05D004381 ORTHO05D005200 8.5e-54 213.8 138 82.6
Rhsim13G0223600 Rhododendron simsii HOM05D004381 ORTHO05D005200 1.1e-53 213.4 138 81.9
Sed0000340 Sechium edule HOM05D004381 ORTHO05D005200 1.1e-53 213.4 138 81.9
THA.LOC104817902 Tarenaya hassleriana HOM05D004381 ORTHO05D005200 1.1e-53 213.4 138 82.6
ECA233G0542 Erigeron canadensis HOM05D004381 ORTHO05D005200 1.5e-53 213.0 138 81.2
Nn2g15439 Nelumbo nucifera HOM05D004381 ORTHO05D005200 1.5e-53 213.0 138 81.2
AT3G20870 Arabidopsis thaliana HOM05D004381 ORTHO05D005200 1.9e-53 212.6 138 81.9
Sp3g18900 Schrenkiella parvula HOM05D004381 ORTHO05D005200 1.9e-53 212.6 138 82.6
Aa31LG8G7690 Aethionema arabicum HOM05D004381 ORTHO05D005200 3.2e-53 211.8 138 81.9
AL3G34820 Arabidopsis lyrata HOM05D004381 ORTHO05D005200 4.2e-53 211.5 138 81.2
CANSAT35G1357 Cannabis sativa HOM05D004381 ORTHO05D005200 4.2e-53 211.5 138 79.7
Carub.0003s2085 Capsella rubella HOM05D004381 ORTHO05D005200 4.2e-53 211.5 138 81.2
Thhalv10021300m.g Eutrema salsugineum HOM05D004381 ORTHO05D005200 4.2e-53 211.5 138 81.2
PSO210G6888 Papaver somniferum HOM05D004381 ORTHO05D005200 5.5e-53 211.1 138 81.2
MBI01_g27615_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 9.4e-53 210.3 132 84.8
A05p27840 Brassica napus HOM05D004381 ORTHO05D005200 2.1e-52 209.1 135 81.5
C05p43180 Brassica napus HOM05D004381 ORTHO05D005200 2.1e-52 209.1 135 81.5
BolC5t33048H Brassica oleracea HOM05D004381 ORTHO05D005200 2.1e-52 209.1 135 81.5
SEGI_07837 Sequoiadendron giganteum HOM05D004381 ORTHO05D005200 2.1e-52 209.1 138 81.2
CARHR096750 Cardamine hirsuta HOM05D004381 ORTHO05D005200 2.7e-52 208.8 136 80.9
HPP92_020510 Vanilla planifolia HOM05D004381 ORTHO05D005200 2.7e-52 208.8 138 79.7
PSO210G5188 Papaver somniferum HOM05D004381 ORTHO05D005200 3.6e-52 208.4 138 80.4
BraA05t21671Z Brassica rapa HOM05D004381 ORTHO05D005200 8.0e-52 207.2 135 80.7
Lalb_Chr19g0138141 Lupinus albus HOM05D004381 ORTHO05D005200 3.0e-51 205.3 138 78.3
Phvul.011G058500 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 9.7e-50 200.3 135 77.0
Sabra01G0013400 Salix brachista HOM05D004381 ORTHO05D005200 1.7e-49 199.5 182 64.3
arahy.Tifrunner.gnm1.ann1.LPI13M Arachis hypogaea HOM05D004381 ORTHO05D005200 2.8e-49 198.7 123 85.4
Ca_20572_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 2.8e-49 198.7 138 76.8
Ca_30507_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 2.8e-49 198.7 138 76.8
Psat7g213080 Pisum sativum HOM05D004381 ORTHO05D005200 3.7e-49 198.4 134 76.9
ATR0605G196 Amborella trichopoda HOM05D004381 ORTHO05D005200 6.3e-49 197.6 123 85.4
Actinidia16315 Actinidia chinensis HOM05D004381 ORTHO05D005200 1.1e-48 196.8 179 65.4
arahy.Tifrunner.gnm1.ann1.E88S00 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.1e-48 196.8 183 63.4
Oeu035739.1 Olea europaea HOM05D004381 ORTHO05D005200 2.4e-48 195.7 122 85.2
Sabra03G0151600 Salix brachista HOM05D004381 ORTHO05D005200 1.2e-47 193.4 179 63.1
arahy.Tifrunner.gnm1.ann1.BUZ3KN Arachis hypogaea HOM05D004381 ORTHO05D005200 2.6e-47 192.2 135 74.1
arahy.Tifrunner.gnm1.ann1.N626J4 Arachis hypogaea HOM05D004381 ORTHO05D005200 2.6e-47 192.2 135 74.1
Lj1A348T17 Lonicera japonica HOM05D004381 ORTHO05D005200 3.5e-47 191.8 122 82.8
MSTRG.21390 Avicennia marina HOM05D004381 ORTHO05D005200 5.9e-47 191.0 138 74.6
arahy.Tifrunner.gnm1.ann1.T21L4I Arachis hypogaea HOM05D004381 ORTHO05D005200 1.0e-46 190.3 179 63.7
Lj3g0009499 Lotus japonicus HOM05D004381 ORTHO05D005200 1.0e-46 190.3 138 73.2
Nitab4.5_0000492g0060 Nicotiana tabacum HOM05D004381 ORTHO05D005200 1.0e-46 190.3 122 82.0
Nitab4.5_0002026g0030 Nicotiana tabacum HOM05D004381 ORTHO05D005200 1.0e-46 190.3 122 82.0
Zm00001eb205960 Zea mays HOM05D004381 ORTHO05D005200 4.2e-45 184.9 138 72.5
EL10Ac4g10297 Beta vulgaris HOM05D004381 ORTHO05D005200 5.5e-45 184.5 130 77.7
Haze_23102 Corylus avellana HOM05D004381 ORTHO05D005200 5.5e-45 184.5 138 75.4
AUR62000098 Chenopodium quinoa HOM05D004381 ORTHO05D005200 1.2e-44 183.3 134 74.6
TPR.G35036 Trifolium pratense HOM05D004381 ORTHO05D005200 1.2e-44 183.3 111 84.7
ClCG02G023360 Citrullus lanatus HOM05D004381 ORTHO05D005200 4.7e-44 181.4 116 82.8
Psat5g287120 Pisum sativum HOM05D004381 ORTHO05D005200 1.0e-43 180.3 97 94.8
vmacro04193 Vaccinium macrocarpon HOM05D004381 ORTHO05D005200 1.8e-43 179.5 138 71.7
Oeu052046.2 Olea europaea HOM05D004381 ORTHO05D005200 2.3e-43 179.1 94 96.8
VMungo1127G1882 Vigna mungo HOM05D004381 ORTHO05D005200 3.0e-43 178.7 122 75.4
Mapoly0039s0091 Marchantia polymorpha HOM05D004381 ORTHO05D005200 1.5e-42 176.4 138 65.2
Medtr4g065640 Medicago truncatula HOM05D004381 ORTHO05D005200 1.5e-42 176.4 136 69.1
AUR62019272 Chenopodium quinoa HOM05D004381 ORTHO05D005200 3.4e-42 175.3 126 74.6
AagrBONN_evm.TU.Sc2ySwM_362.691 Anthoceros agrestis HOM05D004381 ORTHO05D005200 4.4e-42 174.9 138 65.2
SMO347G0569 Selaginella moellendorffii HOM05D004381 ORTHO05D005200 2.8e-41 172.2 132 68.9
Pp3c16_16530 Physcomitrium patens HOM05D004381 ORTHO05D005200 9.1e-40 167.2 138 63.0
HanXRQChr17g0534131 Helianthus annuus HOM05D004381 ORTHO05D005200 2.2e-38 162.5 150 64.7
TWI34G1572 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 1.9e-37 159.5 146 63.0
Hma1.2p1_0118F.1_g056480 Hydrangea macrophylla HOM05D004381 ORTHO05D005200 3.6e-36 155.2 84 92.9
Gohir.D11G292000 Gossypium hirsutum HOM05D004381 ORTHO05D005200 4.5e-31 138.3 74 94.6
Gorai.007G316100 Gossypium raimondii HOM05D004381 ORTHO05D005200 4.5e-31 138.3 74 94.6
unitig_26.g10132 Utricularia gibba HOM05D004381 ORTHO05D005200 8.6e-30 134.0 80 83.8
Os08g0100200 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 6.1e-28 127.9 128 60.2
arahy.Tifrunner.gnm1.ann1.H592TP Arachis hypogaea HOM05D004381 ORTHO05D005200 1.5e-26 123.2 112 62.5
Dinv08032 Davidia involucrata HOM05D004381 ORTHO05D005200 2.6e-26 122.5 83 79.5
arahy.Tifrunner.gnm1.ann1.9W75VL Arachis hypogaea HOM05D004381 ORTHO05D005200 2.2e-25 119.4 104 64.4
Sc06g0004510 Simmondsia chinensis HOM05D004381 ORTHO05D005200 2.9e-25 119.0 83 74.7
Cre03.g189550 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 3.2e-24 115.5 129 48.1
Glyma.12G056900 Glycine max HOM05D004381 ORTHO05D005200 3.5e-23 112.1 83 68.7
Glyma.08G063100 Glycine max HOM05D004381 ORTHO05D005200 2.9e-17 92.4 57 78.9
TPR.G39903 Trifolium pratense HOM05D004381 ORTHO05D005200 3.9e-14 82.0 64 67.2
MBI09_g41969_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 5.0e-14 81.6 70 65.7
CBR_g19660 Chara braunii HOM05D004381 ORTHO05D005200 1.6e-12 76.6 156 35.9
arahy.Tifrunner.gnm1.ann1.T6H5I3 Arachis hypogaea HOM05D004381 ORTHO05D005200 2.1e-12 76.3 46 82.6
CBR_g37790 Chara braunii HOM05D004381 ORTHO05D005200 8.1e-12 74.3 132 36.4
PRCOL_00002167 Prasinoderma coloniale HOM05D004381 ORTHO05D005200 1.1e-11 73.9 130 32.3
TPR.G33171 Trifolium pratense HOM05D004381 ORTHO05D005200 2.3e-11 72.8 43 81.4
CBR_g35021 Chara braunii HOM05D004381 ORTHO05D005200 4.0e-11 72.0 130 30.0
MCO07G169 Micromonas commoda HOM05D004381 ORTHO05D005200 4.0e-11 72.0 149 32.9
MCO07G525 Micromonas commoda HOM05D004381 ORTHO05D005200 6.8e-11 71.2 142 31.0
CBR_g37792 Chara braunii HOM05D004381 ORTHO05D005200 1.2e-10 70.5 132 34.1
Cre01.g066187 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 4.1e-08 62.0 126 30.2
Cre09.g392060 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 4.1e-08 62.0 141 31.2
Ca_06100_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 5.4e-08 61.6 35 85.7
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 3.5e-07 58.9 125 34.4
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 3.5e-07 58.9 125 34.4
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 4.6e-07 58.5 125 33.6
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 4.6e-07 58.5 125 33.6
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 7.8e-07 57.8 119 34.5
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 1.3e-06 57.0 119 34.5
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.3e-06 57.0 119 34.5
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.3e-06 57.0 119 34.5
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 1.7e-06 56.6 125 32.8
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 1.7e-06 56.6 125 32.8
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 1.7e-06 56.6 125 32.8
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 1.7e-06 56.6 119 34.5
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 1.7e-06 56.6 119 34.5
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 1.7e-06 56.6 119 33.6
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 2.3e-06 56.2 119 33.6
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 2.3e-06 56.2 119 33.6
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 2.3e-06 56.2 119 33.6
Cre12.g530400 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 2.3e-06 56.2 157 27.4
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 2.3e-06 56.2 119 32.8
TAR636G1592 Trochodendron aralioides HOM05D004381 ORTHO05D415991 2.3e-06 56.2 38 71.1
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 3.0e-06 55.8 119 32.8
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 3.9e-06 55.5 119 32.8
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 3.9e-06 55.5 119 32.8
MCO09G526 Micromonas commoda HOM05D004172 ORTHO05D006010 3.9e-06 55.5 105 34.3
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 3.9e-06 55.5 125 32.0
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 5.1e-06 55.1 119 32.8
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 6.6e-06 54.7 119 32.8
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 6.6e-06 54.7 119 32.8
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 6.6e-06 54.7 119 32.8
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 8.6e-06 54.3 117 33.3
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 8.6e-06 54.3 119 32.8
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 8.6e-06 54.3 119 34.5


User provided reference genes

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