Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 5.2e-274 947.2 515 100.0
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 6.4e-163 578.2 526 64.6
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 7.3e-159 564.7 470 71.5
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 2.4e-149 533.1 544 62.5
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 4.0e-149 532.3 526 61.6
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 2.9e-147 526.2 535 60.4
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 8.4e-147 524.6 535 60.2
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 7.6e-140 501.5 534 56.9
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 3.5e-137 492.7 520 58.1
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 8.2e-134 481.5 537 55.9
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 7.6e-132 474.9 533 58.2
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 1.0e-131 474.6 537 55.3
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 7.1e-130 468.4 528 56.6
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 4.6e-129 465.7 517 57.4
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 7.9e-129 464.9 524 56.7
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 3.7e-126 456.1 526 53.6
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 3.1e-125 453.0 529 54.8
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.2e-124 451.1 528 54.4
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.6e-124 449.9 412 65.3
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 5.0e-123 445.7 515 54.0
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 3.2e-122 443.0 530 55.1
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 1.8e-120 437.2 460 58.3
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 1.3e-118 431.0 527 52.9
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 2.2e-118 430.3 508 53.5
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 5.3e-117 425.6 531 52.2
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 5.3e-117 425.6 415 61.7
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 2.0e-116 423.7 537 50.5
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 2.6e-116 423.3 533 53.8
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 8.5e-115 418.3 530 50.2
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 1.4e-114 417.5 518 50.4
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 5.5e-114 415.6 516 53.7
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 1.6e-113 414.1 527 51.0
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 4.7e-113 412.5 528 53.0
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 3.0e-112 409.8 532 51.3
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 3.0e-112 409.8 595 48.2
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 1.1e-111 407.9 585 47.7
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 5.7e-111 405.6 564 50.5
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 9.7e-111 404.8 530 50.2
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.3e-110 404.4 538 52.6
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 1.7e-110 404.1 527 51.6
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 1.4e-109 401.0 523 51.2
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 3.1e-109 399.8 536 52.6
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 5.3e-109 399.1 611 46.6
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 7.0e-109 398.7 544 49.8
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.2e-108 397.9 522 49.6
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 2.0e-108 397.1 449 54.1
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 3.5e-108 396.4 519 48.9
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 7.7e-108 395.2 576 50.7
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 1.7e-107 394.0 545 49.5
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 2.5e-106 390.2 599 48.6
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 3.6e-105 386.3 547 51.9
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 4.7e-105 386.0 526 48.9
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 1.4e-104 384.4 526 47.5
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 3.9e-104 382.9 518 50.4
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.0e-103 380.6 558 49.5
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 1.3e-102 377.9 474 51.5
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 1.3e-102 377.9 474 51.5
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 6.3e-102 375.6 490 49.8
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 8.2e-102 375.2 588 46.3
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 2.4e-101 373.6 542 48.2
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 5.3e-101 372.5 542 48.0
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 3.5e-100 369.8 520 45.8
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 3.5e-100 369.8 596 45.1
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 5.9e-100 369.0 533 50.5
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 1.7e-99 367.5 542 47.8
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 6.1e-97 359.0 528 45.3
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 1.0e-96 358.2 525 48.4
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 2.3e-96 357.1 542 46.9
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 6.8e-96 355.5 507 48.7
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 2.0e-95 354.0 494 49.6
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 2.6e-95 353.6 609 45.6
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 3.4e-95 353.2 478 48.1
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 5.7e-95 352.4 528 49.1
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 1.7e-94 350.9 563 42.8
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 4.8e-94 349.4 551 45.2
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 1.1e-93 348.2 529 47.3
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 4.1e-93 346.3 542 44.1
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.5e-92 343.2 477 52.0
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 3.5e-92 343.2 525 47.8
MSTRG.17597 Avicennia marina HOM05D001846 ORTHO05D005785 8.0e-89 332.0 564 43.6
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 3.4e-87 326.6 541 44.7
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 5.7e-87 325.9 474 47.3
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 4.8e-86 322.8 599 44.7
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 1.8e-85 320.9 434 49.3
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 2.7e-84 317.0 377 52.8
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 2.3e-80 303.9 539 42.1
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 1.3e-78 298.1 522 42.7
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 1.4e-72 278.1 520 40.2
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 3.4e-71 273.5 564 38.1
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 5.8e-71 272.7 520 39.8
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 2.9e-70 270.4 527 39.8
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 4.9e-70 269.6 401 46.6
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 4.1e-69 266.5 450 42.7
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 2.7e-68 263.8 528 38.1
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 1.0e-67 261.9 530 38.3
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 2.5e-66 257.3 448 42.0
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 5.6e-66 256.1 525 37.7
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 7.3e-66 255.8 488 41.2
MSTRG.18433 Avicennia marina HOM05D001846 ORTHO05D005785 1.6e-65 254.6 344 49.7
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 3.6e-65 253.4 425 42.8
FAN25G3220 Fragaria x ananassa HOM05D001846 ORTHO05D005785 8.9e-64 248.8 323 53.3
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 1.5e-63 248.1 514 37.2
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 2.0e-63 247.7 517 39.3
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 9.2e-61 238.8 522 36.8
Sp1g38080 Schrenkiella parvula HOM05D001846 ORTHO05D005785 1.2e-60 238.4 521 37.0
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 3.4e-55 220.3 531 32.2
CARHR041560 Cardamine hirsuta HOM05D001846 ORTHO05D005785 1.7e-54 218.0 521 36.5
Aa31LG10G3580 Aethionema arabicum HOM05D000089 ORTHO05D005785 3.2e-53 213.8 520 35.4
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 9.2e-53 212.2 535 34.0
AL1G59260 Arabidopsis lyrata HOM05D001846 ORTHO05D005785 1.2e-52 211.8 522 36.4
BraA06t23456Z Brassica rapa HOM05D001846 ORTHO05D005785 8.9e-48 195.7 495 34.7
CDE05G3609 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 1.9e-45 188.0 307 44.0
BcaB07g33587 Brassica carinata HOM05D001846 ORTHO05D005785 7.1e-45 186.0 492 33.5
Zm00001eb400050 Zea mays HOM05D001846 ORTHO05D005785 9.3e-45 185.7 540 34.3
BolC3t21298H Brassica oleracea HOM05D001846 ORTHO05D005785 7.8e-44 182.6 514 33.3
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 2.3e-43 181.0 452 35.4
C03p89760 Brassica napus HOM05D001846 ORTHO05D005785 2.5e-42 177.6 511 32.9
Zm00001eb008800 Zea mays HOM05D001846 ORTHO05D005785 2.5e-42 177.6 535 35.0
BcaC01g01249 Brassica carinata HOM05D001846 ORTHO05D005785 4.3e-42 176.8 512 32.8
C06p06570 Brassica napus HOM05D001846 ORTHO05D005785 5.6e-42 176.4 495 34.1
PGSC0003DMG400010305 Solanum tuberosum HOM05D001846 ORTHO05D005785 9.6e-42 175.6 316 43.7
BcaC08g43310 Brassica carinata HOM05D001846 ORTHO05D005785 1.1e-40 172.2 493 34.7
BraA08t32338Z Brassica rapa HOM05D001846 ORTHO05D005785 2.4e-40 171.0 513 32.2
Gohir.A09G113600 Gossypium hirsutum HOM05D001846 ORTHO05D005785 4.0e-40 170.2 291 44.3
BolC6t35770H Brassica oleracea HOM05D001846 ORTHO05D005785 9.0e-40 169.1 493 34.3
BcaB04g17234 Brassica carinata HOM05D001846 ORTHO05D005785 8.4e-38 162.5 517 32.7
A06p02500 Brassica napus HOM05D001846 ORTHO05D005785 2.4e-37 161.0 495 32.1
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 3.0e-35 154.1 141 58.9
A08p03060 Brassica napus HOM05D001846 ORTHO05D005785 3.9e-35 153.7 513 31.0
Nn2g13769 Nelumbo nucifera HOM05D001846 ORTHO05D005785 1.5e-34 151.8 282 42.6
Actinidia26798 Actinidia chinensis HOM05D001846 ORTHO05D005785 1.9e-34 151.4 410 33.7
Nn6g35051 Nelumbo nucifera HOM05D001846 ORTHO05D005785 2.6e-31 141.0 127 56.7
HPP92_007908 Vanilla planifolia HOM05D001846 ORTHO05D005785 6.4e-30 136.3 305 36.1
Glyma.06G203350 Glycine max HOM05D001846 ORTHO05D005785 1.2e-28 132.1 156 54.5
Gohir.A09G113700 Gossypium hirsutum HOM05D001846 ORTHO05D005785 3.9e-27 127.1 192 46.9
QL02p066233 Quercus lobata HOM05D001846 ORTHO05D005785 8.7e-27 125.9 124 59.7
CDE05G1816 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 6.2e-25 119.8 179 44.7
SGA_v2.0_scaffold247G44890 Striga asiatica HOM05D001846 ORTHO05D005785 2.6e-23 114.4 252 33.7
Os03g0216900 Oryza sativa ssp. japonica HOM05D001846 ORTHO05D005785 1.3e-22 112.1 338 31.4
MSTRG.18434 Avicennia marina HOM05D001846 ORTHO05D005785 5.3e-16 90.1 221 34.4
QL10p038631 Quercus lobata HOM05D001846 ORTHO05D005785 1.2e-15 89.0 94 55.3
MBI04_g34435_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 3.5e-12 77.4 79 60.8
Zm00001eb393780 Zea mays HOM05D001846 ORTHO05D005785 3.5e-12 77.4 178 34.8


User provided reference genes

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