Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36178 Davidia involucrata HOM05D009314 ORTHO05D010771 2.0e-83 312.4 157 100.0
Dinv36180 Davidia involucrata HOM05D009314 ORTHO05D010771 1.0e-42 177.2 98 96.9
CSS0035273 Camellia sinensis var. sinensis HOM05D009314 ORTHO05D010771 5.7e-38 161.4 154 58.4
CSS0040039 Camellia sinensis var. sinensis HOM05D009314 ORTHO05D010771 5.7e-38 161.4 154 58.4
Rhsim13G0211700 Rhododendron simsii HOM05D009314 ORTHO05D010771 7.7e-35 151.0 146 55.5
Rhsim13G0211300 Rhododendron simsii HOM05D009314 ORTHO05D010771 1.0e-34 150.6 147 56.5
Hma1.2p1_0264F.1_g106100 Hydrangea macrophylla HOM05D009314 ORTHO05D010771 5.0e-34 148.3 153 52.3
TAR623G1047 Trochodendron aralioides HOM05D000082 ORTHO05D010771 4.7e-32 141.7 154 54.5
TAR623G1339 Trochodendron aralioides HOM05D000082 ORTHO05D010771 4.7e-32 141.7 154 54.5
TAR623G0775 Trochodendron aralioides HOM05D000082 ORTHO05D010771 1.4e-28 130.2 152 48.7
Manes.01G180000 Manihot esculenta HOM05D009314 ORTHO05D010771 1.8e-28 129.8 148 52.7
Haze_23218 Corylus avellana HOM05D009314 ORTHO05D010771 6.5e-26 121.3 147 49.0
CiPaw.13G151900 Carya illinoinensis HOM05D009314 ORTHO05D010771 5.5e-25 118.2 147 46.3
Thecc.09G250000 Theobroma cacao HOM05D009314 ORTHO05D010771 5.5e-25 118.2 150 46.7
QL01p017452 Quercus lobata HOM05D009314 ORTHO05D010771 2.7e-24 115.9 147 50.3
QL01p017459 Quercus lobata HOM05D009314 ORTHO05D010771 2.7e-24 115.9 147 50.3
Cfa009845 Carpinus fangiana HOM05D009314 ORTHO05D010771 6.1e-24 114.8 147 46.9
Duzib168G0779 Durio zibethinus HOM05D009314 ORTHO05D010771 5.2e-23 111.7 145 45.5
Duzib168G1505 Durio zibethinus HOM05D009314 ORTHO05D010771 1.2e-22 110.5 145 44.8
Duzib168G1425 Durio zibethinus HOM05D009314 ORTHO05D010771 2.6e-22 109.4 145 44.1
Thecc.09G253000 Theobroma cacao HOM05D009314 ORTHO05D010771 1.3e-21 107.1 143 46.2
Cpa.g.c46939 Carica papaya HOM05D009314 ORTHO05D010771 1.1e-20 104.0 148 41.9
Cpa.g.sc157.71 Carica papaya HOM05D009314 ORTHO05D010771 1.1e-20 104.0 148 41.9
Atru.chr3.2782 Acer truncatum HOM05D000082 ORTHO05D010771 5.9e-19 98.2 150 45.3
Actinidia16373 Actinidia chinensis HOM05D058151 ORTHO05D010771 2.9e-18 95.9 118 48.3
EL10Ac5g12769 Beta vulgaris HOM05D009314 ORTHO05D010771 3.8e-18 95.5 161 40.4
Ciclev10017481m.g Citrus clementina HOM05D009314 ORTHO05D010771 5.5e-17 91.7 154 40.9
Sc07g0009640 Simmondsia chinensis HOM05D009314 ORTHO05D010771 5.5e-17 91.7 158 35.4
Gorai.006G120600 Gossypium raimondii HOM05D009314 ORTHO05D010771 4.7e-16 88.6 143 38.5
Gohir.D09G102950 Gossypium hirsutum HOM05D009314 ORTHO05D010771 1.0e-15 87.4 143 38.5
Gohir.A09G106250 Gossypium hirsutum HOM05D009314 ORTHO05D010771 1.4e-15 87.0 143 37.8
Nn7g36661 Nelumbo nucifera HOM05D009314 ORTHO05D010771 2.0e-14 83.2 110 41.8
COL.COLO4_33241 Corchorus olitorius HOM05D009314 ORTHO05D010771 2.6e-14 82.8 143 38.5
COL.COLO4_05196 Corchorus olitorius HOM05D009314 ORTHO05D010771 7.0e-12 74.7 105 40.0
Actinidia24462 Actinidia chinensis HOM05D058151 ORTHO05D010771 5.9e-11 71.6 80 50.0
Duzib170G0049 Durio zibethinus HOM05D009314 ORTHO05D010771 2.9e-10 69.3 91 47.3
Aqoxy1G04213 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 9.8e-06 54.3 50 48.0
Aqoxy1G04214 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 9.8e-06 54.3 50 48.0


User provided reference genes

Program Settings