Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 3.6e-58 228.4 148 100.0
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 1.4e-25 120.2 96 68.8
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 4.9e-23 111.7 96 63.5
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 3.2e-22 109.0 76 77.6
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 3.0e-20 102.4 166 43.4
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.1e-19 100.5 88 63.6
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 9.5e-19 97.4 96 58.3
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 2.8e-18 95.9 70 74.3
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 3.6e-18 95.5 85 62.4
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 4.7e-18 95.1 82 67.1
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 4.7e-18 95.1 81 60.5
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 8.1e-18 94.4 84 63.1
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 8.1e-18 94.4 84 63.1
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.1e-17 94.0 81 65.4
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.1e-17 94.0 78 65.4
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.3e-17 92.8 73 67.1
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 2.3e-17 92.8 83 63.9
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 4.0e-17 92.0 81 64.2
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 4.0e-17 92.0 83 62.7
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 5.2e-17 91.7 77 67.5
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 5.2e-17 91.7 81 64.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 5.2e-17 91.7 106 51.9
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 6.8e-17 91.3 73 65.8
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.5e-16 90.1 76 65.8
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 2.0e-16 89.7 83 61.4
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 2.0e-16 89.7 80 60.0
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.0e-16 89.7 81 63.0
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 2.6e-16 89.4 87 58.6
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 3.4e-16 89.0 95 53.7
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 4.4e-16 88.6 73 64.4
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 7.5e-16 87.8 82 62.2
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 9.9e-16 87.4 81 61.7
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 9.9e-16 87.4 81 61.7
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 1.7e-15 86.7 94 56.4
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 1.7e-15 86.7 80 62.5
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 2.2e-15 86.3 80 62.5
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 4.9e-15 85.1 72 66.7
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 6.4e-15 84.7 62 71.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 8.3e-15 84.3 75 60.0
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 8.3e-15 84.3 90 55.6
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 1.1e-14 84.0 74 64.9
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 1.1e-14 84.0 71 64.8
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 1.4e-14 83.6 83 56.6
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 1.9e-14 83.2 79 59.5
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.9e-14 83.2 70 65.7
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 3.2e-14 82.4 80 60.0
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 3.2e-14 82.4 80 60.0
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 4.1e-14 82.0 77 59.7
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 4.1e-14 82.0 71 67.6
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 4.1e-14 82.0 80 58.8
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 5.4e-14 81.6 87 54.0
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 5.4e-14 81.6 79 60.8
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 7.1e-14 81.3 69 65.2
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.2e-13 80.5 87 56.3
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 1.2e-13 80.5 77 58.4
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 1.2e-13 80.5 77 58.4
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.2e-13 80.5 112 45.5
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.6e-13 80.1 82 54.9
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 4.6e-13 78.6 77 61.0
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 6.0e-13 78.2 75 61.3
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 7.8e-13 77.8 86 50.0
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.0e-12 77.4 74 60.8
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 1.0e-12 77.4 80 57.5
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.7e-12 76.6 81 56.8
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 1.7e-12 76.6 74 60.8
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 3.9e-12 75.5 73 60.3
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 8.6e-12 74.3 84 52.4
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 1.5e-11 73.6 79 53.2
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 1.9e-11 73.2 63 63.5
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 5.6e-11 71.6 81 53.1
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 5.6e-11 71.6 100 47.0
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 7.3e-11 71.2 65 55.4
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 7.3e-11 71.2 65 55.4
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 7.3e-11 71.2 65 55.4
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 9.5e-11 70.9 70 60.0
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.2e-10 70.5 65 55.4
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 1.2e-10 70.5 71 56.3
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 1.6e-10 70.1 63 60.3
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 2.1e-10 69.7 64 60.9
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 2.1e-10 69.7 63 60.3
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 4.7e-10 68.6 71 50.7
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 4.7e-10 68.6 73 57.5
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 4.7e-10 68.6 70 60.0
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 8.1e-10 67.8 65 58.5
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 8.1e-10 67.8 78 53.8
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 8.1e-10 67.8 78 53.8
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 8.1e-10 67.8 78 53.8
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 1.1e-09 67.4 70 55.7
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 3.1e-09 65.9 81 49.4
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 3.1e-09 65.9 77 51.9
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 5.2e-09 65.1 50 68.0
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 1.2e-08 63.9 57 61.4
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 1.2e-08 63.9 68 55.9
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 1.5e-08 63.5 52 73.1
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 3.4e-08 62.4 66 59.1
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 3.4e-08 62.4 81 46.9
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 1.1e-06 57.4 94 43.6
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 4.2e-06 55.5 42 71.4
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 4.2e-06 55.5 57 56.1
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 5.4e-06 55.1 30 90.0


User provided reference genes

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