Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 2.1e-143 512.3 245 100.0
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.4e-107 392.5 252 74.6
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.4e-107 392.5 252 74.6
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 4.0e-107 391.7 242 75.2
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 7.6e-106 387.5 248 71.0
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.1e-104 383.6 247 69.6
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.0e-102 377.1 249 71.9
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.6e-100 369.8 250 67.2
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 8.2e-100 367.5 249 66.7
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.1e-99 367.1 249 68.7
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 9.0e-99 364.0 244 67.6
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.6e-98 362.5 249 66.3
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 7.6e-98 360.9 250 66.0
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.0e-97 360.5 249 65.9
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.2e-96 355.5 244 67.2
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 4.2e-96 355.1 268 61.6
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 9.3e-96 354.0 250 63.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.7e-95 352.4 250 64.8
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 4.6e-95 351.7 249 63.9
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.3e-94 350.1 248 64.9
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 2.3e-94 349.4 250 66.4
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 4.3e-93 345.1 249 64.3
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 4.3e-93 345.1 250 62.8
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 5.7e-93 344.7 249 65.1
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 9.7e-93 344.0 247 65.2
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 9.7e-93 344.0 246 62.6
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.6e-92 343.2 237 66.7
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.8e-92 341.7 247 64.8
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 4.8e-92 341.7 225 68.4
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 8.2e-92 340.9 237 66.7
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 8.2e-92 340.9 249 64.3
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 2.4e-91 339.3 213 70.0
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 4.1e-91 338.6 250 62.8
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.1e-91 338.6 247 64.8
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 6.9e-91 337.8 240 64.6
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.0e-90 336.3 213 72.3
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 3.4e-90 335.5 247 61.9
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 5.9e-90 334.7 237 66.2
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.3e-89 333.6 277 57.8
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.3e-89 333.6 233 66.5
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 2.2e-89 332.8 221 67.4
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 6.5e-89 331.3 209 71.3
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.5e-88 329.3 238 65.5
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 3.6e-87 325.5 254 59.8
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 6.1e-87 324.7 239 65.3
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.8e-86 323.2 269 58.7
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 2.3e-86 322.8 254 59.1
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.3e-86 322.8 249 62.7
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.3e-86 322.8 242 63.6
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.1e-85 320.5 254 57.9
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.5e-85 320.1 245 62.9
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.5e-85 320.1 245 60.0
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 2.6e-85 319.3 254 62.2
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 4.4e-85 318.5 203 68.5
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 4.4e-85 318.5 254 62.2
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.2e-84 316.2 263 58.2
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.4e-83 313.5 244 58.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 2.4e-83 312.8 231 64.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 4.1e-83 312.0 253 59.3
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 9.1e-83 310.8 253 59.7
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.5e-82 310.1 250 60.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.0e-81 307.4 255 56.5
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.2e-81 306.2 270 56.7
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 5.0e-81 305.1 274 56.9
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 6.5e-81 304.7 250 61.2
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 8.5e-81 304.3 238 62.6
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.1e-80 303.9 245 56.3
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.1e-80 303.9 205 65.9
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.2e-80 302.4 265 55.8
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 7.2e-80 301.2 236 59.7
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 9.4e-80 300.8 209 65.6
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.2e-79 300.4 254 57.1
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.6e-79 300.1 252 57.5
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.7e-79 299.3 233 62.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.8e-78 296.6 232 59.5
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 3.9e-78 295.4 279 53.8
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 3.9e-78 295.4 251 56.2
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 5.2e-78 295.0 266 55.6
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 5.2e-78 295.0 267 55.1
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.0e-77 293.1 196 66.3
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.6e-77 292.7 197 69.5
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 4.4e-77 292.0 209 65.6
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 7.4e-77 291.2 254 56.7
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 9.7e-77 290.8 224 62.1
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.2e-76 289.7 224 62.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.2e-76 289.7 253 55.7
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 2.8e-76 289.3 254 57.1
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.8e-76 289.3 248 56.0
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.7e-76 288.9 200 64.5
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.7e-76 288.9 245 56.7
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 3.1e-75 285.8 253 56.5
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-74 283.5 172 72.7
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.0e-74 283.1 172 72.7
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 3.5e-74 282.3 172 72.7
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 6.5e-73 278.1 244 57.0
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 5.5e-72 275.0 232 56.9
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 5.5e-72 275.0 232 56.9
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-68 263.8 223 57.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.3e-68 263.8 213 61.0
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.4e-67 259.6 229 55.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 4.1e-67 258.8 196 63.3
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.6e-66 256.9 222 55.9
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 6.5e-65 251.5 212 57.5
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 6.5e-65 251.5 212 57.5
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.5e-64 250.4 202 59.9
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 4.2e-64 248.8 166 68.1
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.4e-62 243.8 160 70.0
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.0e-61 240.0 184 59.8
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.1e-59 234.2 136 75.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.9e-56 223.4 171 60.2
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.2e-56 222.6 171 60.2
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 6.8e-54 214.9 157 59.2
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.0e-46 189.1 229 45.0
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 3.3e-40 169.5 132 58.3
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.6e-34 149.1 128 50.8
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.3e-33 147.5 128 51.6
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.3e-33 147.5 84 67.9
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.9e-32 143.7 82 74.4
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.5e-29 134.0 102 53.9
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.8e-23 113.2 178 42.7
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 6.9e-06 55.5 82 42.7


User provided reference genes

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