Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.8e-109 398.7 206 100.0
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 4.8e-61 238.4 210 63.3
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.0e-59 233.0 207 64.3
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 3.4e-59 232.3 207 63.3
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 8.5e-58 227.6 199 60.8
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 1.2e-56 223.8 219 63.9
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 3.6e-56 222.2 222 61.7
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 4.7e-56 221.9 203 62.1
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.1e-54 217.2 213 58.7
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 1.1e-54 217.2 215 60.9
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 2.0e-54 216.5 220 57.7
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 7.4e-54 214.5 217 59.4
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 2.8e-53 212.6 212 62.3
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 6.3e-53 211.5 197 60.4
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.4e-52 210.3 212 59.9
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.1e-52 209.1 209 58.9
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.2e-51 207.2 197 60.4
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.0e-51 206.5 211 60.2
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 2.0e-51 206.5 198 60.6
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 2.6e-51 206.1 201 59.7
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 4.5e-51 205.3 212 59.0
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 5.9e-51 204.9 210 57.6
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 1.0e-50 204.1 213 57.3
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.0e-50 204.1 215 57.7
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 1.3e-50 203.8 203 56.7
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.7e-50 203.4 207 60.9
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.7e-50 203.4 208 57.7
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 2.9e-50 202.6 216 56.9
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.9e-50 202.6 205 60.0
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 5.0e-50 201.8 213 57.7
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 6.5e-50 201.4 214 56.1
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 8.5e-50 201.1 215 55.3
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.1e-49 200.7 207 58.9
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.5e-49 199.5 207 56.5
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 2.5e-49 199.5 209 56.5
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.2e-49 198.7 208 55.3
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 5.5e-49 198.4 216 56.5
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.2e-48 197.2 215 56.7
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.1e-48 196.4 215 56.7
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.7e-48 196.1 208 54.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.1e-48 194.9 209 55.5
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.1e-48 194.9 208 54.8
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 6.1e-48 194.9 215 56.3
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 3.0e-47 192.6 210 56.2
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.0e-47 192.6 202 55.9
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 4.0e-47 192.2 197 57.4
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 6.7e-47 191.4 191 58.1
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.2e-46 190.7 213 56.8
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.5e-46 190.3 191 57.6
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.5e-46 190.3 202 54.5
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 7.5e-46 188.0 213 54.9
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 9.7e-46 187.6 211 55.9
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.7e-45 186.8 212 53.3
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 2.2e-45 186.4 195 56.9
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 2.8e-45 186.0 184 60.9
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 6.3e-45 184.9 208 53.4
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.3e-45 184.9 208 53.4
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.4e-44 183.7 203 54.7
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.8e-44 183.3 212 55.7
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 4.1e-44 182.2 158 63.3
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 4.1e-44 182.2 148 65.5
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 5.3e-44 181.8 255 46.7
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 9.1e-44 181.0 199 54.3
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.7e-43 179.5 199 54.3
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.0e-42 177.6 199 53.3
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.7e-42 176.8 242 49.2
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.2e-42 176.4 218 53.2
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 8.5e-42 174.5 223 51.6
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.9e-41 173.3 220 53.2
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.9e-41 173.3 113 73.5
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 3.2e-41 172.6 221 52.9
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 4.2e-41 172.2 221 53.8
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 5.5e-41 171.8 201 53.2
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 9.4e-41 171.0 221 52.9
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.2e-40 170.6 190 52.6
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 1.2e-40 170.6 249 47.4
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 4.7e-40 168.7 163 56.4
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 2.3e-39 166.4 162 56.2
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 5.2e-39 165.2 219 53.9
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-38 164.1 221 52.5
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 1.2e-38 164.1 221 52.5
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 1.2e-38 164.1 221 52.5
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 1.2e-38 164.1 243 46.9
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.5e-38 163.7 222 50.0
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 2.0e-38 163.3 221 52.0
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.7e-37 160.2 222 53.2
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.8e-37 159.5 221 51.6
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 8.3e-37 157.9 195 47.2
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 3.1e-36 156.0 211 47.9
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 3.1e-36 156.0 203 47.8
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 4.1e-36 155.6 206 47.6
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 2.0e-35 153.3 225 50.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 2.0e-35 153.3 225 50.2
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 2.3e-34 149.8 222 51.4
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 5.0e-34 148.7 222 51.4
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 5.5e-33 145.2 195 51.8
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.6e-32 143.7 221 49.3
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 1.6e-32 143.7 174 52.3
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 3.6e-32 142.5 210 47.6
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 8.0e-32 141.4 222 48.2
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 4.0e-31 139.0 217 47.9
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 5.2e-31 138.7 98 66.3
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 8.9e-31 137.9 209 46.4
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 1.5e-30 137.1 161 52.8
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 5.7e-30 135.2 99 69.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 5.7e-30 135.2 99 69.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 5.7e-30 135.2 99 69.7
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 2.8e-29 132.9 162 50.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 7.8e-27 124.8 209 42.1
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.2e-24 117.5 122 54.9
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.1e-24 116.7 207 40.1
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 3.6e-24 115.9 142 52.1
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 5.2e-23 112.1 92 56.5
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 8.9e-23 111.3 92 56.5
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 2.6e-22 109.8 86 59.3
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.3e-21 107.5 208 39.9
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 5.0e-18 95.5 164 46.3
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 2.5e-17 93.2 148 39.9
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 8.0e-16 88.2 54 77.8
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.3e-15 86.7 67 73.1
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 5.2e-15 85.5 167 40.1
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.6e-14 83.2 170 37.6
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.6e-14 83.2 170 37.6
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.2e-11 74.3 41 75.6
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 8.6e-10 68.2 215 34.0
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 7.3e-09 65.1 227 32.2
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.2e-08 64.3 165 32.1
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.6e-08 63.9 105 37.1
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 2.8e-08 63.2 35 71.4
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 3.6e-08 62.8 88 38.6
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 6.8e-07 58.5 88 44.3
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 9.9e-06 54.7 232 30.2


User provided reference genes

Program Settings