Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36137 Davidia involucrata HOM05D000071 ORTHO05D000029 1.4e-37 159.1 78 100.0
Dinv36139 Davidia involucrata HOM05D000071 ORTHO05D000029 1.2e-12 76.3 96 50.0
QL09p011709 Quercus lobata HOM05D000071 ORTHO05D000029 2.8e-09 65.1 106 36.8
CSS0019214 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.7e-09 64.3 91 45.1
QL09p010982 Quercus lobata HOM05D000071 ORTHO05D000029 3.1e-08 61.6 101 39.6
Lj5P370T48 Lonicera japonica HOM05D000071 ORTHO05D000029 6.8e-08 60.5 41 61.0
CSS0038152 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.5e-07 59.3 28 82.1
Lj5P372T12 Lonicera japonica HOM05D000071 ORTHO05D000029 1.5e-07 59.3 41 58.5
CSS0016951 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.0e-07 58.9 28 82.1
CSS0041720 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.6e-07 58.5 32 68.8
Hma1.2p1_0453F.1_g156120 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 4.4e-07 57.8 28 82.1
Hma1.2p1_0142F.1_g064250 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 5.8e-07 57.4 45 60.0
Manes.18G087101 Manihot esculenta HOM05D000071 ORTHO05D000029 5.8e-07 57.4 29 72.4
Lalb_Chr19g0130511 Lupinus albus HOM05D000071 ORTHO05D000029 7.5e-07 57.0 33 60.6
Lalb_Chr19g0130531 Lupinus albus HOM05D000071 ORTHO05D000029 7.5e-07 57.0 33 60.6
Potri.015G025100 Populus trichocarpa HOM05D000071 ORTHO05D000029 7.5e-07 57.0 28 78.6
QL05p086061 Quercus lobata HOM05D000071 ORTHO05D000029 7.5e-07 57.0 89 39.3
QL05p087095 Quercus lobata HOM05D000071 ORTHO05D000029 7.5e-07 57.0 33 66.7
Dinv36144 Davidia involucrata HOM05D000071 ORTHO05D000029 9.8e-07 56.6 93 45.2
CSS0004356 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.3e-06 56.2 92 38.0
CSS0009620 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.3e-06 56.2 92 38.0
HanXRQChr07g0202541 Helianthus annuus HOM05D000071 ORTHO05D000029 1.3e-06 56.2 29 75.9
Lj5P372T7 Lonicera japonica HOM05D000071 ORTHO05D000029 1.3e-06 56.2 41 53.7
Hund28504 Selenicereus undatus HOM05D000071 ORTHO05D000029 1.3e-06 56.2 27 77.8
Hund28506 Selenicereus undatus HOM05D000071 ORTHO05D000029 1.3e-06 56.2 27 77.8
CSS0016028 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.7e-06 55.8 98 40.8
CANSAT56G3234 Cannabis sativa HOM05D000071 ORTHO05D000029 1.7e-06 55.8 58 46.6
Ciclev10017769m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.7e-06 55.8 30 70.0
Hma1.2p1_0142F.1_g064200 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 1.7e-06 55.8 59 47.5
Potri.015G024500 Populus trichocarpa HOM05D000071 ORTHO05D000029 1.7e-06 55.8 28 75.0
Potri.015G024800 Populus trichocarpa HOM05D000071 ORTHO05D000029 1.7e-06 55.8 28 75.0
CANSAT56G0990 Cannabis sativa HOM05D000071 ORTHO05D000029 2.2e-06 55.5 63 42.9
FAN02G3130 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.2e-06 55.5 30 70.0
Lj5P371T19 Lonicera japonica HOM05D000071 ORTHO05D000029 2.2e-06 55.5 30 66.7
Oeu044493.1 Olea europaea HOM05D000071 ORTHO05D000029 2.2e-06 55.5 41 56.1
QL02p063252 Quercus lobata HOM05D000071 ORTHO05D000029 2.2e-06 55.5 97 37.1
Sabra12G0023700 Salix brachista HOM05D000071 ORTHO05D000029 2.2e-06 55.5 35 65.7
Hma1.2p1_0142F.1_g064270 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 2.9e-06 55.1 45 55.6
Manes.14G019985 Manihot esculenta HOM05D000071 ORTHO05D000029 2.9e-06 55.1 39 53.8
Medtr5g047490 Medicago truncatula HOM05D000071 ORTHO05D000029 2.9e-06 55.1 41 53.7
Oeu056468.1 Olea europaea HOM05D000071 ORTHO05D000029 2.9e-06 55.1 45 51.1
RcHm_v2.0_Chr7g0207481 Rosa chinensis HOM05D000071 ORTHO05D000029 2.9e-06 55.1 35 57.1
vmacro10343 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 2.9e-06 55.1 29 75.9
GSVIVG01028766001 Vitis vinifera HOM05D000071 ORTHO05D000029 2.9e-06 55.1 28 75.0
CAN.G160.59 Capsicum annuum HOM05D000071 ORTHO05D000029 3.7e-06 54.7 41 58.5
ECA232G3400 Erigeron canadensis HOM05D000071 ORTHO05D000029 3.7e-06 54.7 45 53.3
Prupe.2G155600 Prunus persica HOM05D000071 ORTHO05D000029 3.7e-06 54.7 34 64.7
CSS0044448 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.9e-06 54.3 91 41.8
CiPaw.09G167900 Carya illinoinensis HOM05D000071 ORTHO05D000029 4.9e-06 54.3 32 65.6
Ciclev10005980m.g Citrus clementina HOM05D000071 ORTHO05D000029 4.9e-06 54.3 27 70.4
Lj3A915T46 Lonicera japonica HOM05D000071 ORTHO05D000029 4.9e-06 54.3 45 48.9
RcHm_v2.0_Chr7g0207711 Rosa chinensis HOM05D000071 ORTHO05D000029 4.9e-06 54.3 34 61.8
PGSC0003DMG401014605 Solanum tuberosum HOM05D000071 ORTHO05D000029 4.9e-06 54.3 29 62.1
FvH4_6g28530 Fragaria vesca HOM05D000071 ORTHO05D000029 6.4e-06 53.9 30 66.7
FAN05G1261 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.4e-06 53.9 30 66.7
FAN14G0510 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.4e-06 53.9 30 66.7
Oeu041068.2 Olea europaea HOM05D000071 ORTHO05D000029 6.4e-06 53.9 45 55.6
Oeu054804.1 Olea europaea HOM05D000071 ORTHO05D000029 6.4e-06 53.9 35 71.4
Prupe.2G078100 Prunus persica HOM05D000071 ORTHO05D000029 6.4e-06 53.9 33 63.6
Prupe.2G078600 Prunus persica HOM05D000071 ORTHO05D000029 6.4e-06 53.9 33 63.6
QL05p086426 Quercus lobata HOM05D000071 ORTHO05D000029 6.4e-06 53.9 95 38.9
RcHm_v2.0_Chr0c22g0500431 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 34 61.8
RcHm_v2.0_Chr0c22g0500681 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 36 55.6
RcHm_v2.0_Chr7g0206581 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 36 55.6
RcHm_v2.0_Chr7g0206921 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 34 61.8
RcHm_v2.0_Chr7g0207201 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 34 61.8
RcHm_v2.0_Chr7g0207601 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 53.9 36 55.6
arahy.Tifrunner.gnm1.ann1.6DA5XH Arachis hypogaea HOM05D000071 ORTHO05D000029 8.3e-06 53.5 33 63.6
CANSAT21G1199 Cannabis sativa HOM05D000071 ORTHO05D000029 8.3e-06 53.5 29 69.0
CANSAT21G1502 Cannabis sativa HOM05D000071 ORTHO05D000029 8.3e-06 53.5 29 69.0
Duzib133G0850 Durio zibethinus HOM05D000053 ORTHO05D000035 8.3e-06 53.5 32 65.6
Migut.M00448 Erythranthe guttata HOM05D000071 ORTHO05D000029 8.3e-06 53.5 42 57.1
FvH4_5g20780 Fragaria vesca HOM05D000071 ORTHO05D000029 8.3e-06 53.5 32 65.6
FAN04G2267 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.3e-06 53.5 32 65.6
FAN18G4569 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.3e-06 53.5 32 65.6
Medtr5g047390 Medicago truncatula HOM05D000071 ORTHO05D000029 8.3e-06 53.5 41 53.7
Oeu058273.1 Olea europaea HOM05D000071 ORTHO05D000029 8.3e-06 53.5 37 59.5
QL09p011978 Quercus lobata HOM05D000071 ORTHO05D000029 8.3e-06 53.5 102 37.3
QL09p041840 Quercus lobata HOM05D000071 ORTHO05D000029 8.3e-06 53.5 100 31.0


User provided reference genes

Program Settings