Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 2.8e-267 925.2 664 100.0
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 3.0e-72 277.3 459 46.4
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 4.8e-70 270.0 257 61.1
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 2.4e-69 267.7 489 43.4
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 9.1e-69 265.8 341 51.3
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.3e-67 261.9 410 45.6
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.2e-66 257.3 347 50.7
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.6e-65 255.0 442 44.8
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 2.6e-63 247.7 435 44.1
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 5.7e-63 246.5 408 45.1
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 7.4e-63 246.1 425 43.3
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 2.2e-62 244.6 204 66.2
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 4.8e-62 243.4 484 40.1
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.4e-61 241.9 280 53.6
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 3.1e-61 240.7 356 46.1
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 1.3e-59 235.3 349 44.7
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.7e-59 235.0 233 62.7
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 3.8e-59 233.8 472 40.9
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 3.8e-59 233.8 319 49.2
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 2.3e-56 224.6 330 46.1
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 3.0e-56 224.2 399 41.9
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 6.7e-56 223.0 396 41.9
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 6.7e-56 223.0 396 41.9
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 8.8e-56 222.6 274 48.5
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 3.3e-55 220.7 444 39.9
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 7.5e-55 219.5 379 45.1
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.8e-54 216.9 422 37.7
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 8.2e-54 216.1 430 38.4
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.8e-53 214.9 406 40.6
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 7.0e-53 213.0 217 53.5
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.9e-51 207.6 419 39.6
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 5.0e-51 206.8 438 38.4
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 8.5e-51 206.1 435 37.7
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 8.5e-51 206.1 428 37.9
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.5e-50 205.3 412 38.3
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 7.2e-50 203.0 377 44.8
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.2e-49 202.2 435 40.2
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 4.7e-49 200.3 430 37.7
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 4.7e-49 200.3 349 41.0
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 8.0e-49 199.5 401 39.9
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 1.8e-48 198.4 406 40.6
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.3e-48 198.0 371 42.0
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 5.2e-48 196.8 377 37.9
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 6.8e-48 196.4 447 38.3
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 6.8e-48 196.4 444 36.7
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 8.8e-48 196.1 342 40.6
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 8.8e-48 196.1 371 41.8
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 1.2e-47 195.7 403 38.7
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 1.2e-47 195.7 235 51.1
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.5e-47 195.3 434 40.8
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 5.4e-45 186.8 272 46.0
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 7.0e-45 186.4 447 36.9
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 7.0e-45 186.4 286 45.1
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 9.1e-45 186.0 439 35.1
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.6e-44 185.3 271 44.3
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.7e-44 184.5 213 53.1
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 2.7e-44 184.5 426 35.9
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 1.3e-43 182.2 240 50.4
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 1.5e-42 178.7 457 36.5
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 2.5e-42 177.9 251 44.6
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 3.2e-42 177.6 205 51.2
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.2e-41 175.6 380 39.5
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 8.0e-41 172.9 254 42.9
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.4e-39 167.2 380 39.2
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 5.7e-39 166.8 362 40.9
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 4.9e-38 163.7 445 33.3
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 4.9e-38 163.7 439 33.9
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 6.3e-38 163.3 363 40.5
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 4.1e-37 160.6 255 43.5
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 5.4e-37 160.2 279 40.5
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 7.0e-37 159.8 241 45.2
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 9.2e-37 159.5 233 44.6
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 9.2e-37 159.5 228 45.2
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 9.2e-37 159.5 191 49.2
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 9.2e-37 159.5 414 36.2
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 5.9e-36 156.8 218 44.0
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 5.9e-36 156.8 218 44.0
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.3e-35 155.6 450 34.0
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.3e-35 155.6 380 36.3
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 1.7e-35 155.2 265 40.4
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 1.7e-35 155.2 267 40.1
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 6.6e-35 153.3 219 42.0
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 6.6e-35 153.3 231 42.9
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.5e-34 152.1 427 32.6
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 1.2e-33 149.1 438 31.7
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 1.6e-33 148.7 390 33.8
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 1.4e-32 145.6 270 35.9
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 2.0e-31 141.7 330 36.7
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 3.4e-31 141.0 295 37.6
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 5.7e-31 140.2 211 37.4
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 7.5e-31 139.8 241 41.5
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 1.3e-30 139.0 338 36.4
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 2.9e-30 137.9 231 39.4
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 2.9e-30 137.9 205 39.0
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 6.4e-30 136.7 321 36.1
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 6.4e-30 136.7 284 35.9
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 8.3e-30 136.3 209 45.9
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 7.0e-29 133.3 345 33.6
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.6e-28 132.1 254 35.4
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 2.7e-28 131.3 190 39.5
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 2.7e-28 131.3 181 50.8
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 7.8e-28 129.8 409 32.3
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 2.3e-27 128.3 396 33.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 3.3e-26 124.4 218 39.0
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 3.3e-26 124.4 378 30.7
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 4.3e-26 124.0 211 34.1
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 9.5e-26 122.9 406 32.8
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 1.6e-25 122.1 214 37.9
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 4.0e-24 117.5 412 27.9
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 8.9e-24 116.3 313 33.5
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.2e-23 115.9 382 30.4
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 2.0e-23 115.2 400 30.0
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 9.8e-23 112.8 403 29.0
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 2.4e-21 108.2 213 39.4
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 9.2e-21 106.3 176 42.6
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 2.0e-20 105.1 261 36.8
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 3.0e-19 101.3 261 37.2
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 6.6e-19 100.1 376 29.3
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 5.6e-18 97.1 331 32.6
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 3.6e-17 94.4 350 32.9
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.2e-15 89.4 137 43.8
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 4.1e-13 80.9 383 29.0
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 7.1e-13 80.1 324 30.2
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.7e-12 78.2 143 42.7
Actinidia30827 Actinidia chinensis HOM05D056270 ORTHO05D007526 6.6e-11 73.6 320 30.9
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 4.3e-10 70.9 120 40.0
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 9.5e-10 69.7 140 37.1
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.6e-09 68.9 179 30.7
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 1.6e-09 68.9 126 38.1
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 1.6e-09 68.9 115 41.7
Ciclev10019915m.g Citrus clementina HOM05D004242 ORTHO05D004349 8.1e-09 66.6 188 33.0
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 8.1e-09 66.6 115 35.7
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 2.4e-08 65.1 107 43.0
BcaC02g12659 Brassica carinata HOM05D004242 ORTHO05D004349 4.0e-08 64.3 122 37.7
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.5e-07 62.4 106 41.5
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 2.0e-07 62.0 117 37.6
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 2.0e-07 62.0 117 37.6
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 2.0e-07 62.0 116 37.1
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 2.6e-07 61.6 114 37.7
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 3.4e-07 61.2 123 33.3
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 3.4e-07 61.2 118 39.0
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 3.4e-07 61.2 116 33.6
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 5.8e-07 60.5 133 30.1
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 7.6e-07 60.1 111 36.0
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 9.9e-07 59.7 187 28.9
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 9.9e-07 59.7 132 32.6
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 9.9e-07 59.7 168 32.1
TAR339G0002 Trochodendron aralioides HOM05D004242 ORTHO05D004349 9.9e-07 59.7 182 29.1
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 1.3e-06 59.3 155 31.6
DCAR_002987 Daucus carota HOM05D004242 ORTHO05D004349 1.3e-06 59.3 138 31.9
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.3e-06 59.3 113 34.5
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 1.7e-06 58.9 195 29.2
BraA05t19116Z Brassica rapa HOM05D004242 ORTHO05D004349 2.2e-06 58.5 109 34.9
MELO3C005995.2 Cucumis melo HOM05D004242 ORTHO05D004349 2.2e-06 58.5 143 29.4
Sabra14G0075500 Salix brachista HOM05D004242 ORTHO05D004349 2.9e-06 58.2 120 36.7
SEGI_39402 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 2.9e-06 58.2 160 27.5
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 3.8e-06 57.8 128 32.8
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 3.8e-06 57.8 128 32.8
ClCG05G000580 Citrullus lanatus HOM05D004242 ORTHO05D004349 3.8e-06 57.8 144 28.5
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 3.8e-06 57.8 119 35.3
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 3.8e-06 57.8 144 31.9
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 4.9e-06 57.4 175 29.7
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 4.9e-06 57.4 175 30.3
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 4.9e-06 57.4 108 32.4
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 6.4e-06 57.0 108 38.0
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 6.4e-06 57.0 175 30.3
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 6.4e-06 57.0 118 35.6
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 6.4e-06 57.0 123 34.1
arahy.Tifrunner.gnm1.ann1.6W400J Arachis hypogaea HOM05D004242 ORTHO05D004349 8.4e-06 56.6 110 32.7


User provided reference genes

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