Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.0e-133 479.2 252 100.0
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.8e-81 306.6 234 70.9
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.4e-78 297.0 239 73.2
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.4e-78 297.0 234 71.4
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.8e-73 280.0 235 67.7
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 5.7e-72 275.0 227 65.6
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.3e-71 273.9 236 64.8
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.6e-69 266.2 225 64.9
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 4.5e-69 265.4 238 61.3
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 7.7e-69 264.6 227 64.3
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.7e-68 263.5 230 66.1
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 8.5e-68 261.2 217 67.3
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 5.5e-67 258.5 235 63.4
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 2.7e-66 256.1 244 61.5
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.7e-66 256.1 239 62.8
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.6e-66 255.8 226 65.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.0e-65 254.2 243 63.0
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.8e-65 253.4 232 62.5
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 2.3e-65 253.1 220 66.4
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.1e-64 250.8 177 72.9
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.1e-64 250.8 235 61.3
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.6e-64 249.6 227 61.7
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.4e-64 248.1 236 61.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.3e-63 247.3 236 61.9
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.8e-63 246.1 217 65.4
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 4.8e-63 245.4 208 64.4
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 4.8e-63 245.4 240 61.2
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 8.2e-63 244.6 192 67.7
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.1e-62 244.2 206 66.5
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.8e-62 243.4 292 53.8
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 2.4e-62 243.0 240 61.2
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 7.0e-62 241.5 184 67.4
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 7.0e-62 241.5 245 60.0
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 9.1e-62 241.1 218 61.9
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.5e-61 240.4 232 61.2
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 3.5e-61 239.2 232 60.8
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.2e-60 236.5 183 68.3
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 2.9e-60 236.1 229 59.8
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 3.8e-60 235.7 184 65.8
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 8.5e-60 234.6 227 59.9
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 8.5e-60 234.6 213 62.0
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.4e-59 233.8 237 57.8
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.2e-59 232.6 234 57.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 4.2e-59 232.3 228 60.5
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.2e-58 230.7 232 57.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.2e-58 230.7 228 60.1
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.1e-58 229.9 209 65.1
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 4.7e-58 228.8 184 64.7
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 6.1e-58 228.4 216 57.9
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 6.1e-58 228.4 235 57.9
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 8.0e-58 228.0 214 56.5
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 8.0e-58 228.0 234 55.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.0e-57 227.6 208 62.5
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.0e-57 227.6 234 57.7
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 3.0e-57 226.1 183 65.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 5.2e-57 225.3 183 65.6
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 1.1e-56 224.2 175 67.4
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.1e-56 224.2 184 66.3
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 2.0e-56 223.4 184 65.8
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 2.6e-56 223.0 184 64.1
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 5.7e-56 221.9 184 63.0
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.2e-55 219.9 227 54.6
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 2.8e-55 219.5 235 58.3
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.7e-55 219.2 227 56.8
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.1e-54 217.6 217 57.6
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.1e-54 217.6 211 56.9
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 5.3e-54 215.3 185 61.1
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.2e-53 214.2 186 62.9
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 3.5e-53 212.6 154 69.5
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 5.9e-53 211.8 212 57.1
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 7.7e-53 211.5 198 59.6
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.3e-52 210.7 210 56.2
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.2e-52 209.9 198 59.1
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.9e-52 209.5 185 62.7
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 2.9e-52 209.5 210 55.2
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 3.8e-52 209.1 210 56.2
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 2.5e-51 206.5 211 54.5
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 4.2e-51 205.7 210 54.8
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 5.5e-51 205.3 211 55.0
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 2.7e-50 203.0 169 64.5
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 6.1e-50 201.8 185 61.6
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.3e-47 194.1 185 61.6
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.3e-47 194.1 187 57.2
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.2e-47 193.4 189 57.1
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 1.2e-45 187.6 238 52.9
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 8.0e-42 174.9 185 49.7
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 6.8e-41 171.8 200 53.0
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.7e-39 167.2 214 49.5
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 4.8e-39 165.6 224 48.7
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.3e-39 165.2 227 48.5
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.4e-38 164.1 223 42.6
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 5.5e-35 152.1 179 46.4
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.2e-34 151.0 115 66.1
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.0e-33 147.9 186 47.8
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 2.6e-32 143.3 161 47.2
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.6e-32 143.3 134 57.5
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 4.9e-31 139.0 182 45.1
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 4.7e-26 122.5 91 67.0
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.0e-26 121.7 89 68.5
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 3.2e-22 109.8 81 70.4
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 6.0e-21 105.5 245 31.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 6.6e-20 102.1 118 49.2
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 5.6e-19 99.0 100 58.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 5.6e-19 99.0 97 53.6
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 3.0e-12 76.6 45 82.2
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 8.6e-12 75.1 53 67.9
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.1e-06 58.2 95 42.1


User provided reference genes

Program Settings