Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.5e-200 702.6 343 100.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.1e-174 614.8 336 89.3
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-168 596.7 336 85.4
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.3e-163 578.2 326 85.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.2e-162 576.6 331 83.7
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.6e-162 575.1 334 81.1
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.7e-162 574.7 340 80.6
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.0e-162 573.9 332 82.5
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.2e-161 571.2 336 82.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 5.8e-160 567.8 335 80.6
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.7e-159 566.2 336 80.1
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-159 566.2 336 79.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.2e-159 565.8 333 81.1
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.7e-159 565.1 333 81.1
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.9e-159 564.7 333 80.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.9e-158 562.8 336 79.8
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-158 562.8 336 79.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.6e-157 559.7 333 80.8
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.7e-157 558.9 333 79.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 3.5e-157 558.5 336 80.7
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.0e-157 557.8 333 80.8
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.3e-156 556.6 335 80.6
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.1e-154 549.3 326 80.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 2.0e-152 542.7 336 77.4
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.6e-152 542.3 333 78.4
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.4e-152 541.6 333 77.2
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-151 539.7 325 80.3
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.9e-151 538.9 324 79.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.4e-150 536.6 336 75.3
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.4e-150 536.6 334 77.5
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 3.2e-150 535.4 341 74.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.4e-150 534.6 335 75.8
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 5.4e-150 534.6 333 75.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 7.1e-150 534.3 333 75.7
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.2e-149 533.5 336 76.5
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.7e-149 532.3 334 75.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.7e-149 532.3 336 77.1
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 3.5e-149 531.9 335 76.1
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 7.8e-149 530.8 336 75.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.0e-148 530.4 334 76.3
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.3e-148 530.0 334 75.7
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.0e-148 528.9 332 78.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.9e-148 528.5 335 75.8
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.5e-147 525.8 332 75.9
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.3e-147 525.4 325 76.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 4.3e-147 525.0 335 74.3
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.3e-147 525.0 335 75.5
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.3e-147 525.0 307 80.1
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.2e-146 523.5 332 77.4
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.2e-146 523.5 331 74.3
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.6e-146 523.1 335 75.5
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.8e-146 522.3 325 76.6
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.8e-146 522.3 341 72.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-145 518.8 331 76.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.2e-145 518.1 336 73.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 6.8e-145 517.7 342 72.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.9e-145 517.3 334 74.6
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.0e-144 516.2 325 75.1
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.9e-143 512.3 338 73.1
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.4e-143 511.1 335 74.3
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 7.1e-142 507.7 335 74.0
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.6e-141 506.5 337 74.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 7.3e-139 497.7 334 72.5
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.2e-136 490.3 333 71.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.3e-135 486.9 331 71.3
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.3e-135 486.9 333 72.1
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 6.4e-135 484.6 350 68.0
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.1e-134 483.8 343 68.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.9e-134 483.0 341 68.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.2e-134 481.9 322 71.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.2e-134 481.9 322 71.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.2e-134 481.9 322 71.1
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 7.1e-134 481.1 334 68.9
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.2e-133 480.3 346 67.6
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.7e-133 479.2 322 71.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.7e-133 479.2 322 71.1
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.0e-132 477.2 344 66.9
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.3e-132 476.9 327 69.7
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.7e-132 476.5 343 67.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.0e-132 475.7 332 73.5
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.3e-130 470.3 336 68.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.9e-127 458.4 347 63.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.7e-125 452.6 334 67.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.3e-124 449.5 321 67.3
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.0e-124 449.1 318 68.2
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.9e-124 448.7 334 68.0
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.9e-124 448.7 325 65.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 6.7e-124 448.0 316 66.5
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.9e-121 438.0 330 66.7
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 5.1e-108 395.2 311 62.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 6.9e-105 384.8 312 59.9
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.5e-104 383.6 324 60.5
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.4e-102 377.1 295 63.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.1e-97 360.9 208 81.2
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-87 326.6 203 75.9
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.2e-86 322.8 215 74.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 5.5e-86 322.0 307 52.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-82 310.8 250 61.2
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-82 310.5 305 52.5
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.8e-82 308.9 309 52.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.1e-77 293.5 162 87.0
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.3e-74 284.3 202 68.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.0e-68 263.1 178 69.1
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.1e-65 252.7 163 71.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.2e-64 251.1 132 87.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.5e-62 243.4 159 74.8
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 8.9e-60 235.0 256 52.0
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.6e-55 218.8 130 82.3
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.6e-53 213.0 285 44.2
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-49 200.7 142 71.1
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.5e-46 191.0 142 64.1
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.8e-43 179.1 91 86.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-33 147.9 126 59.5
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.4e-28 130.6 107 58.9
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.8e-20 104.4 72 68.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.7e-18 97.8 232 36.6
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.5e-16 90.1 70 64.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.1e-12 78.6 120 40.0
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.3e-07 60.8 149 30.9
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.1e-07 59.7 214 29.0
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 2.5e-06 57.4 169 27.8
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 2.5e-06 57.4 174 29.9
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 9.6e-06 55.5 112 32.1


User provided reference genes

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