Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 0.0e+00 1350.5 759 100.0
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.8e-222 776.5 866 58.2
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 4.0e-214 748.8 773 62.9
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 2.2e-199 699.9 906 51.9
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 1.7e-196 690.3 798 56.5
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 4.8e-183 645.6 784 54.3
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.6e-178 630.6 821 53.7
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 3.0e-177 626.3 850 51.4
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 5.2e-177 625.5 729 56.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 7.0e-174 615.1 887 49.9
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 5.2e-169 599.0 760 52.9
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 3.7e-167 592.8 806 50.0
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.0e-165 587.0 794 51.0
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 3.2e-163 579.7 797 50.6
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 6.8e-161 572.0 769 49.8
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.3e-159 567.8 822 47.1
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.7e-159 567.4 816 47.3
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 6.3e-159 565.5 797 51.6
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.9e-155 553.9 641 54.0
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 5.2e-153 545.8 642 53.6
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.4e-150 537.7 786 46.8
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 9.2e-150 535.0 775 49.9
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.2e-149 534.6 794 47.1
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 5.9e-149 532.3 793 47.3
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 1.1e-147 528.1 764 49.1
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 4.3e-147 526.2 754 48.5
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 9.5e-147 525.0 882 45.5
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.5e-144 517.7 756 48.1
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.5e-144 517.7 763 48.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 2.6e-144 516.9 832 47.0
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 3.4e-144 516.5 787 45.6
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 2.2e-143 513.8 783 47.8
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.7e-143 513.1 779 48.4
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 8.3e-143 511.9 789 47.7
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 7.8e-141 505.4 776 48.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 7.8e-141 505.4 813 45.9
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.7e-140 504.2 771 49.4
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 8.6e-140 501.9 810 46.3
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.5e-139 501.1 759 47.6
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 4.7e-138 496.1 834 46.6
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 1.8e-137 494.2 762 46.7
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 2.3e-137 493.8 783 46.5
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 5.2e-137 492.7 767 47.5
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 2.2e-135 487.3 775 46.2
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 1.9e-134 484.2 769 47.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 2.1e-133 480.7 887 44.2
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 2.7e-133 480.3 773 45.1
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 4.6e-133 479.6 854 45.7
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 7.8e-133 478.8 813 42.9
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.1e-131 474.9 772 45.5
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 7.3e-131 472.2 773 45.9
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 3.1e-129 466.8 776 45.4
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 8.9e-129 465.3 800 46.6
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 5.8e-128 462.6 766 47.3
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 7.5e-128 462.2 783 46.9
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 7.1e-126 455.7 773 45.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 1.7e-124 451.1 817 44.3
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 3.9e-124 449.9 776 46.3
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.1e-121 441.8 812 44.1
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 1.8e-121 441.0 823 41.7
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 5.2e-121 439.5 833 42.1
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 6.4e-119 432.6 764 43.7
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.9e-118 431.0 797 44.9
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.6e-117 426.4 628 47.3
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 6.6e-116 422.5 821 40.8
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 4.3e-115 419.9 799 42.2
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.2e-114 416.0 780 45.3
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 6.9e-113 412.5 872 41.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 9.9e-112 408.7 831 42.0
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 9.9e-112 408.7 860 41.9
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 2.9e-111 407.1 797 43.9
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.7e-108 397.9 802 43.5
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.3e-107 393.3 578 48.8
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 9.0e-105 385.6 771 40.9
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.0e-104 384.4 290 76.2
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 4.9e-103 379.8 730 43.3
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 8.7e-100 369.0 558 47.1
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 8.7e-100 369.0 558 47.1
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 9.3e-94 349.0 609 44.3
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 3.7e-90 337.0 707 39.0
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 5.3e-81 306.6 756 36.1
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 9.0e-81 305.8 627 39.7
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.9e-79 300.8 624 40.7
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 2.3e-76 291.2 785 35.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.5e-75 288.5 729 35.7
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 3.3e-75 287.3 813 36.8
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 7.4e-75 286.2 593 40.8
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 9.7e-75 285.8 794 33.8
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.7e-74 285.0 596 39.8
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 2.8e-74 284.3 779 38.5
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 8.2e-74 282.7 606 38.6
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.8e-73 281.6 821 35.9
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 2.9e-71 274.2 822 35.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.9e-70 271.6 656 39.3
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 2.5e-70 271.2 602 40.0
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.2e-69 268.9 831 34.7
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 6.1e-69 266.5 641 39.5
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 6.1e-69 266.5 641 39.5
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.4e-68 265.4 824 35.9
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.4e-65 254.6 394 41.4
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 5.9e-64 250.0 402 47.8
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.3e-58 232.3 524 42.0
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 4.1e-57 227.3 720 33.1
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.0e-55 222.6 771 33.3
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 8.0e-53 213.0 610 31.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.0e-52 210.7 775 30.7
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.7e-40 171.4 500 34.4
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 5.5e-38 163.7 624 29.8
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 4.7e-37 160.6 198 51.0
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.9e-30 138.7 725 26.5
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.9e-30 138.7 725 26.5
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.1e-29 135.2 150 60.0
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.9e-26 124.8 684 27.6
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 6.0e-24 117.1 143 54.5
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.7e-15 89.0 170 44.1
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.1e-12 79.7 146 40.4
Oeu016743.1 Olea europaea HOM05D002134 ORTHO05D008658 1.5e-11 75.9 328 30.8
Actinidia29829 Actinidia chinensis HOM05D002134 ORTHO05D008658 8.4e-10 70.1 186 41.9
Nn1g08524 Nelumbo nucifera HOM05D000558 ORTHO05D003119 2.5e-06 58.5 36 72.2
AagrBONN_evm.TU.Sc2ySwM_362.1405 Anthoceros agrestis HOM05D051179 ORTHO05D038399 4.3e-06 57.8 71 47.9


User provided reference genes

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