Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 4.8e-224 780.8 381 100.0
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.3e-197 692.2 371 88.7
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 2.0e-190 669.1 374 85.0
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 2.7e-190 668.7 374 84.8
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 8.6e-189 663.7 365 86.0
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 5.6e-188 661.0 368 85.3
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 3.0e-186 655.2 370 81.9
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 8.9e-186 653.7 376 81.9
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 2.0e-185 652.5 371 83.0
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 2.0e-185 652.5 371 84.9
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 1.7e-184 649.4 378 82.0
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.2e-184 649.0 371 83.3
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 1.9e-183 646.0 373 82.3
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.4e-183 645.6 362 84.0
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 9.2e-183 643.7 376 80.6
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 6.0e-182 641.0 445 72.4
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 1.0e-181 640.2 371 80.9
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 3.9e-181 638.3 371 79.8
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 3.9e-181 638.3 379 80.7
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 5.0e-181 637.9 371 80.9
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 6.6e-181 637.5 376 79.0
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 8.6e-181 637.1 374 80.7
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 2.5e-180 635.6 376 78.2
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 5.6e-180 634.4 371 80.9
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 9.5e-180 633.6 372 81.2
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 1.2e-179 633.3 374 79.4
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 6.2e-179 630.9 371 79.8
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 2.3e-178 629.0 376 79.3
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 1.5e-177 626.3 371 79.2
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 2.0e-177 625.9 378 78.8
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 4.4e-177 624.8 374 78.9
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 7.5e-177 624.0 374 78.6
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.3e-176 623.2 371 79.8
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 2.2e-176 622.5 372 81.7
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 2.2e-176 622.5 394 77.2
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 2.9e-176 622.1 374 78.3
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 2.9e-176 622.1 371 78.2
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 2.9e-176 622.1 365 80.5
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 2.9e-176 622.1 371 78.7
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 3.7e-176 621.7 362 80.7
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 4.9e-176 621.3 374 77.5
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 6.4e-176 620.9 362 80.1
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 6.4e-176 620.9 365 82.7
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 1.1e-175 620.2 372 78.0
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 1.4e-175 619.8 374 77.3
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 1.9e-175 619.4 374 78.9
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 1.9e-175 619.4 371 77.4
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.2e-175 618.6 374 78.3
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 4.1e-175 618.2 379 79.7
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 7.0e-175 617.5 414 74.2
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.2e-174 616.7 368 78.5
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 2.7e-174 615.5 381 76.9
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 3.5e-174 615.1 371 77.6
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 7.8e-174 614.0 367 77.4
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 1.0e-173 613.6 474 66.5
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.3e-173 613.2 369 78.0
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 6.6e-173 610.9 371 77.6
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 6.6e-173 610.9 377 77.7
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 1.1e-172 610.1 358 79.6
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 1.9e-172 609.4 362 80.9
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 4.3e-172 608.2 370 77.8
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 7.3e-172 607.4 375 78.7
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 7.3e-172 607.4 371 76.8
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.6e-171 606.3 371 74.7
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 4.4e-169 598.2 367 74.9
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 5.8e-169 597.8 371 75.7
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 1.7e-168 596.3 373 75.9
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 4.9e-168 594.7 374 77.5
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 6.4e-168 594.3 373 74.8
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 4.1e-167 591.7 376 75.8
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 4.1e-167 591.7 370 75.9
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 7.8e-166 587.4 371 74.7
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 1.7e-165 586.3 378 74.3
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 2.5e-164 582.4 371 75.5
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 3.1e-162 575.5 370 71.9
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.1e-162 575.5 374 74.6
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 8.4e-160 567.4 370 74.6
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 1.6e-158 563.1 364 73.6
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 7.8e-158 560.8 371 72.5
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 1.3e-157 560.1 367 71.9
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 1.7e-157 559.7 371 72.2
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 3.9e-157 558.5 371 72.2
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 1.1e-156 557.0 358 74.6
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 1.1e-156 557.0 367 71.9
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 4.7e-155 551.6 366 72.1
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 9.0e-154 547.4 371 71.4
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 9.0e-154 547.4 371 71.4
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 9.0e-154 547.4 371 71.4
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 1.5e-153 546.6 314 81.5
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.6e-150 536.6 336 75.0
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 6.0e-150 534.6 366 67.5
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.9e-148 529.6 368 67.7
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.8e-141 506.5 370 68.1
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 7.6e-137 491.1 299 78.9
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.6e-126 456.8 314 68.8
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 1.8e-125 453.4 298 71.1
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 3.3e-124 449.1 280 75.7
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 5.0e-120 435.3 359 56.8
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 5.1e-117 425.2 366 56.3
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 5.9e-113 411.8 372 55.6
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.4e-74 284.3 245 58.4
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 2.1e-70 270.4 256 52.0
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 1.0e-69 268.1 374 44.7
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 3.0e-64 250.0 200 61.5
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 4.6e-57 226.1 467 33.8
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 5.4e-42 176.0 85 91.8
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 2.5e-23 114.0 96 59.4
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 2.9e-19 100.5 64 68.8
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 4.9e-19 99.8 66 72.7
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 4.9e-19 99.8 66 72.7
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 4.9e-19 99.8 66 72.7
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 2.1e-17 94.4 83 56.6
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 1.8e-16 91.3 82 54.9
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.0e-12 77.8 35 88.6
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 1.4e-10 71.6 69 50.7
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 2.1e-09 67.8 64 51.6
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.3e-08 65.1 31 87.1
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.3e-08 64.3 31 83.9
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 5.1e-08 63.2 31 83.9


User provided reference genes

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