Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1558.1 789 100.0
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1404.8 813 88.2
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1332.4 782 86.1
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1328.2 785 84.7
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1322.0 782 85.4
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1321.2 782 85.0
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1311.2 782 83.9
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1308.1 763 86.5
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1305.8 776 84.3
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1303.9 782 84.5
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1303.5 763 86.6
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1302.7 782 84.3
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1297.7 781 83.7
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1296.2 785 84.3
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1295.4 785 83.6
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1293.5 763 85.7
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1292.7 785 83.4
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1292.3 782 84.7
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1290.8 786 82.7
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1290.4 785 83.4
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1289.2 764 85.2
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1288.1 782 84.0
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 785 83.1
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 764 84.9
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 764 84.9
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 764 84.9
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1286.2 785 82.9
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1285.8 750 85.1
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1285.0 764 85.2
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1284.6 743 87.1
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1283.5 785 82.9
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1282.7 762 84.0
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1281.2 781 83.9
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1280.4 779 84.1
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1278.5 781 82.8
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1277.3 766 84.3
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1276.2 758 84.8
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1272.7 768 82.9
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1272.3 781 82.5
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1270.8 779 83.7
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1269.6 768 83.5
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1265.4 774 83.1
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 798 80.8
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1261.5 775 82.1
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1261.1 764 84.4
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1258.8 781 81.6
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1258.4 763 83.6
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1258.0 782 83.1
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1258.0 757 83.4
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1257.7 763 83.6
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1257.7 784 81.1
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1256.9 760 85.1
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 782 82.5
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 785 81.7
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 782 81.5
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1255.7 775 81.5
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1255.7 776 83.2
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1254.2 783 81.1
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1253.4 763 82.7
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1252.3 766 83.0
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1250.7 784 82.5
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1249.2 755 84.9
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1245.3 782 81.3
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1243.0 781 80.8
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1240.3 763 81.9
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1238.8 764 82.2
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1237.2 766 83.2
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1236.9 782 81.8
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1236.1 767 83.7
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1235.7 763 82.7
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1234.2 766 82.4
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 779 79.6
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 763 81.5
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 782 80.3
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1233.0 782 79.8
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1232.6 799 75.2
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1231.1 777 80.2
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1230.7 765 82.5
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1227.2 759 80.9
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1226.5 775 79.6
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1225.7 775 80.9
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1224.2 787 79.8
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1222.6 805 77.5
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1222.6 783 78.8
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1221.8 781 79.9
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1219.9 782 79.2
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1219.9 775 80.3
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1216.4 782 79.0
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1216.1 795 79.1
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1214.9 751 81.5
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1214.9 775 80.0
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1213.4 765 79.6
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1213.4 786 77.7
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1212.2 820 78.0
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1211.4 789 78.8
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 761 80.9
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 761 80.9
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 761 80.9
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1208.0 772 80.7
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1207.6 796 78.5
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1203.3 787 78.5
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1202.6 752 79.4
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1202.6 769 79.5
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1201.0 757 79.7
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1198.3 821 75.3
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1197.6 752 80.6
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1195.6 784 78.6
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1195.6 784 78.6
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1195.6 784 78.6
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1195.6 784 78.6
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1192.9 774 79.3
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1191.8 762 80.7
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1189.5 765 80.8
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1188.7 757 79.0
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1183.7 768 80.2
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 822 73.7
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 776 79.1
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1181.8 768 80.1
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 757 78.5
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 758 78.6
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1176.4 763 76.7
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1175.2 760 78.4
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1165.6 758 78.5
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1160.2 782 78.0
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1160.2 768 75.5
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1154.0 764 77.1
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 787 70.5
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1144.4 763 77.3
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1135.6 745 76.1
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1125.9 781 76.1
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1124.8 784 74.7
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1122.5 768 74.5
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1115.9 782 73.9
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 633 85.8
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1096.3 851 67.7
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1095.9 759 77.3
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1092.0 772 71.6
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1081.2 838 68.6
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1077.8 764 72.4
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 5.9e-309 1063.9 597 85.3
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.0e-308 1063.1 753 71.8
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 5.7e-304 1047.3 761 69.9
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 7.0e-302 1040.4 669 82.2
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 1.7e-276 956.1 631 71.6
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 2.5e-267 925.6 512 87.3
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 4.7e-266 921.4 588 75.7
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.0e-256 889.4 781 64.4
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 1.9e-227 793.1 477 85.5
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 5.2e-196 688.7 708 56.6
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 1.4e-156 557.8 328 82.6
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 2.1e-149 533.9 468 58.3
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 1.5e-115 421.4 292 83.6
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 8.2e-109 399.1 273 72.9
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.3e-103 380.9 397 55.2
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.1e-89 335.5 581 45.6
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 2.6e-86 324.3 259 74.1
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.3e-58 232.3 156 75.6
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 4.1e-44 184.1 163 56.4
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.4e-37 160.2 129 65.1
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 2.4e-36 158.3 503 28.4
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 3.6e-32 144.4 462 28.6
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 8.9e-31 139.8 76 86.8
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 2.6e-30 138.3 457 26.7
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 7.1e-28 130.2 68 92.6
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 1.7e-26 125.6 471 27.8
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 1.1e-25 122.9 431 27.4
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.9e-25 122.1 96 66.7
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 6.8e-23 113.6 73 71.2
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 3.1e-15 88.2 220 31.4
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 9.0e-15 86.7 217 29.5
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 2.0e-14 85.5 83 54.2
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 2.9e-13 81.6 132 40.2
CBR_g38920 Chara braunii HOM05D003945 ORTHO05D004625 1.6e-08 65.9 127 33.1
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-07 62.4 102 38.2
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 6.9e-07 60.5 38 76.3


User provided reference genes

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