Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 1.9e-60 235.7 126 100.0
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 5.4e-39 164.5 127 71.7
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 4.3e-36 154.8 126 70.6
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 4.3e-36 154.8 127 71.7
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 2.8e-35 152.1 128 68.8
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 8.1e-35 150.6 127 68.5
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 1.1e-34 150.2 129 66.7
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.1e-34 150.2 127 66.9
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 2.3e-34 149.1 129 67.4
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 3.1e-34 148.7 124 65.3
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 4.0e-34 148.3 128 68.8
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 4.0e-34 148.3 126 68.3
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 5.2e-34 147.9 127 68.5
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 8.9e-34 147.1 127 69.3
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 1.2e-33 146.7 127 67.7
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 1.2e-33 146.7 128 68.0
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 1.5e-33 146.4 124 65.3
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 2.0e-33 146.0 127 63.0
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 4.4e-33 144.8 126 66.7
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 7.6e-33 144.1 124 64.5
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 7.6e-33 144.1 121 66.9
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 7.6e-33 144.1 121 66.1
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 9.9e-33 143.7 129 66.7
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 1.3e-32 143.3 122 68.0
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 1.3e-32 143.3 126 65.1
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.3e-32 143.3 126 65.1
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 1.7e-32 142.9 127 65.4
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 2.2e-32 142.5 122 67.2
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.2e-32 142.5 126 65.1
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 2.2e-32 142.5 127 60.6
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.9e-32 142.1 126 65.1
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 6.4e-32 141.0 126 65.9
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 1.1e-31 140.2 103 72.8
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 1.1e-31 140.2 128 65.6
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 1.9e-31 139.4 122 66.4
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 1.9e-31 139.4 127 64.6
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 1.9e-31 139.4 128 64.1
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-31 139.4 125 64.0
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-31 139.4 125 64.8
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 1.9e-31 139.4 125 60.8
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 2.4e-31 139.0 128 63.3
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 2.4e-31 139.0 128 63.3
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.2e-31 138.7 125 64.0
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.2e-31 138.7 125 64.0
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.2e-31 138.7 125 64.0
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 3.2e-31 138.7 127 63.8
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 3.2e-31 138.7 122 64.8
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 3.2e-31 138.7 124 60.5
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 4.1e-31 138.3 125 64.0
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.1e-31 138.3 125 64.0
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 4.1e-31 138.3 117 65.8
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 4.1e-31 138.3 126 65.9
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 7.1e-31 137.5 126 61.9
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 7.1e-31 137.5 124 62.1
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 9.2e-31 137.1 125 63.2
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 9.2e-31 137.1 125 64.0
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 1.2e-30 136.7 128 62.5
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 1.2e-30 136.7 126 61.9
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 1.2e-30 136.7 130 63.1
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 1.6e-30 136.3 127 65.4
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 1.6e-30 136.3 125 64.0
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.1e-30 136.0 125 63.2
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 2.7e-30 135.6 127 63.0
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 2.7e-30 135.6 125 64.0
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 3.5e-30 135.2 124 62.9
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.5e-30 135.2 125 62.4
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 3.5e-30 135.2 130 61.5
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 4.6e-30 134.8 126 61.9
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 6.0e-30 134.4 126 61.9
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 7.8e-30 134.0 129 61.2
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 7.8e-30 134.0 126 61.9
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 1.0e-29 133.7 126 62.7
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 1.0e-29 133.7 127 62.2
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 1.3e-29 133.3 129 60.5
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 1.3e-29 133.3 127 62.2
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.3e-29 133.3 127 62.2
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 1.7e-29 132.9 128 60.2
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 3.0e-29 132.1 129 62.0
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 3.0e-29 132.1 129 62.0
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 3.9e-29 131.7 124 58.9
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 3.9e-29 131.7 125 63.2
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 5.1e-29 131.3 118 61.9
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 5.1e-29 131.3 126 59.5
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 5.1e-29 131.3 126 62.7
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 6.6e-29 131.0 127 61.4
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 1.5e-28 129.8 127 58.3
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.5e-28 129.8 129 60.5
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 1.5e-28 129.8 128 58.6
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 1.9e-28 129.4 126 61.1
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 2.5e-28 129.0 130 61.5
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 2.5e-28 129.0 130 60.8
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 3.3e-28 128.6 125 61.6
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 3.3e-28 128.6 129 60.5
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 4.3e-28 128.3 126 60.3
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 4.3e-28 128.3 126 58.7
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 5.6e-28 127.9 127 60.6
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 7.3e-28 127.5 127 59.8
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 9.6e-28 127.1 126 60.3
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 1.2e-27 126.7 127 59.8
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 1.2e-27 126.7 127 55.1
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 1.2e-27 126.7 126 59.5
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 1.6e-27 126.3 96 69.8
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 2.1e-27 125.9 121 63.6
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 2.1e-27 125.9 126 58.7
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 2.8e-27 125.6 127 61.4
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 3.6e-27 125.2 127 62.2
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 3.6e-27 125.2 127 62.2
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 3.6e-27 125.2 127 62.2
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 3.6e-27 125.2 126 61.1
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 3.6e-27 125.2 127 55.9
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 6.2e-27 124.4 127 59.8
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 8.1e-27 124.0 127 59.8
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 8.1e-27 124.0 120 57.5
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 1.1e-26 123.6 128 62.5
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 1.1e-26 123.6 128 62.5
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 1.4e-26 123.2 125 54.4
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 3.1e-26 122.1 127 60.6
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 3.1e-26 122.1 124 56.5
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 3.1e-26 122.1 124 56.5
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.0e-26 121.7 99 66.7
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 4.0e-26 121.7 127 61.4
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 8.9e-26 120.6 94 69.1
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 8.9e-26 120.6 101 64.4
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 1.2e-25 120.2 127 60.6
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 1.2e-25 120.2 119 56.3
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 1.5e-25 119.8 125 58.4
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 1.5e-25 119.8 128 58.6
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 2.6e-25 119.0 129 61.2
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 3.4e-25 118.6 126 57.9
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 3.4e-25 118.6 126 57.9
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 4.4e-25 118.2 126 57.9
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 5.8e-25 117.9 125 57.6
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 1.3e-24 116.7 127 55.1
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 1.3e-24 116.7 122 57.4
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 1.7e-24 116.3 124 58.1
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 6.4e-24 114.4 101 64.4
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 8.4e-24 114.0 108 59.3
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 8.4e-24 114.0 123 56.9
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 1.9e-23 112.8 123 56.9
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 4.2e-23 111.7 127 52.8
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 4.6e-22 108.2 124 54.0
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 6.0e-22 107.8 126 52.4
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 1.3e-21 106.7 132 52.3
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 3.0e-21 105.5 110 57.3
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 3.9e-21 105.1 106 61.3
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 1.9e-20 102.8 102 56.9
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 5.6e-20 101.3 125 52.0
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 1.6e-19 99.8 130 53.8
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 3.6e-19 98.6 123 48.8
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 1.2e-17 93.6 127 48.0
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 2.6e-17 92.4 126 42.9
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 4.2e-15 85.1 126 41.3
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 7.1e-15 84.3 131 40.5
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 4.6e-14 81.6 71 62.0
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 7.9e-14 80.9 126 42.9
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 1.0e-13 80.5 73 60.3
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 3.0e-13 79.0 126 44.4
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 5.1e-13 78.2 79 60.8
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 2.5e-12 75.9 52 75.0
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 1.4e-10 70.1 126 42.1
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 2.4e-10 69.3 47 76.6
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 5.8e-09 64.7 109 43.1
Psat3g122680 Pisum sativum HOM05D004388 ORTHO05D005106 1.1e-07 60.5 113 41.6
SEGI_27588 Sequoiadendron giganteum HOM05D004388 ORTHO05D005106 2.1e-06 56.2 126 34.1


User provided reference genes

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