Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 5.0e-117 424.5 218 100.0
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.3e-64 250.4 223 64.1
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.5e-60 236.1 215 61.4
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 9.6e-60 234.2 224 58.9
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.6e-57 226.1 226 54.4
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 4.9e-56 221.9 216 56.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 8.4e-56 221.1 225 54.7
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.7e-54 216.1 219 54.8
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 6.0e-54 214.9 223 52.9
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 7.9e-54 214.5 216 55.1
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 7.9e-54 214.5 216 55.1
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 1.8e-53 213.4 216 55.1
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.9e-53 212.2 219 53.9
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 5.1e-53 211.8 220 57.7
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.5e-52 210.3 221 49.3
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 5.6e-52 208.4 221 49.3
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 3.7e-51 205.7 219 59.4
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.7e-51 205.7 226 51.8
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 8.1e-51 204.5 217 60.4
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.1e-50 204.1 222 52.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.1e-50 204.1 212 63.7
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 9.0e-50 201.1 221 52.9
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 4.5e-49 198.7 213 54.0
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.0e-48 197.6 223 52.0
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.0e-48 197.6 223 52.0
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.3e-48 197.2 220 47.3
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.9e-48 196.1 223 57.8
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 4.9e-48 195.3 217 53.9
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 8.4e-48 194.5 216 50.9
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.1e-47 194.1 221 48.0
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.4e-47 193.7 216 49.5
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.9e-47 193.4 216 49.1
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 7.1e-47 191.4 212 50.5
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 9.3e-47 191.0 220 48.2
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.6e-46 190.3 244 46.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.7e-46 189.5 221 52.5
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 6.0e-46 188.3 221 47.5
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 7.9e-46 188.0 220 47.3
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.0e-45 187.6 219 55.3
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.8e-45 186.8 216 47.7
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 8.7e-45 184.5 220 46.4
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.1e-44 184.1 213 49.8
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.1e-44 184.1 213 49.8
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.5e-44 183.0 221 52.0
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.3e-44 182.2 220 49.1
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 5.7e-44 181.8 223 49.8
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 7.4e-44 181.4 209 47.4
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 9.6e-44 181.0 213 48.8
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.1e-43 179.9 219 53.4
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 2.8e-43 179.5 218 46.8
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 3.7e-43 179.1 221 53.4
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 3.7e-43 179.1 222 50.5
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 3.7e-43 179.1 213 48.8
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 3.7e-43 179.1 213 50.7
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 4.8e-43 178.7 225 44.9
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.8e-42 176.8 222 52.7
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.1e-42 176.0 213 46.9
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 6.9e-42 174.9 213 48.8
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 2.0e-41 173.3 220 50.0
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.6e-41 172.9 213 47.9
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 2.6e-41 172.9 159 57.9
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 4.5e-41 172.2 206 46.6
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.0e-40 171.0 223 47.5
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.9e-40 169.5 218 47.7
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 5.0e-40 168.7 213 50.7
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.1e-39 167.5 229 44.1
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.1e-39 167.5 213 51.2
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.1e-39 167.5 206 47.1
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 3.2e-39 166.0 228 43.0
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.5e-39 165.2 223 46.6
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 9.3e-39 164.5 211 48.3
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 3.6e-38 162.5 224 45.1
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 7.9e-38 161.4 216 41.7
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.0e-37 161.0 218 43.1
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.3e-37 160.6 212 49.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.3e-37 160.6 214 53.3
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 8.7e-37 157.9 213 50.7
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 7.4e-36 154.8 180 47.2
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.8e-35 152.9 212 47.2
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 3.7e-35 152.5 222 44.1
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 6.3e-35 151.8 226 41.2
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 6.3e-35 151.8 223 42.6
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 4.1e-34 149.1 209 46.4
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 5.3e-34 148.7 210 51.0
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.2e-33 147.5 172 54.1
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.3e-32 144.1 217 41.5
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.7e-32 143.7 150 48.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 6.5e-32 141.7 212 40.1
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.1e-31 141.0 225 40.4
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 2.7e-30 136.3 220 47.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.7e-30 136.3 223 44.8
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 2.7e-30 136.3 220 40.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 8.8e-29 131.3 184 41.8
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.2e-27 126.7 217 37.8
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 5.3e-26 122.1 160 45.0
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 3.4e-25 119.4 215 36.7
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 7.7e-25 118.2 217 37.8
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 2.2e-24 116.7 195 38.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.4e-23 114.0 197 38.1
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.4e-23 114.0 200 36.0
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.4e-23 114.0 200 36.0
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.2e-23 112.8 213 37.6
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.2e-22 110.9 203 36.5
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.2e-22 110.9 154 42.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 2.1e-22 110.2 198 36.4
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 4.7e-22 109.0 191 40.3
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 7.9e-22 108.2 196 37.2
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 1.4e-21 107.5 194 37.6
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 3.0e-21 106.3 214 35.5
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 3.3e-20 102.8 195 37.9
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.7e-19 100.5 159 39.0
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 7.0e-18 95.1 134 46.3
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 9.1e-18 94.7 214 39.7
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 9.1e-18 94.7 214 39.7
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 1.7e-16 90.5 106 50.9
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 3.8e-16 89.4 111 45.9
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 5.2e-13 79.0 231 31.2
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 8.8e-13 78.2 199 32.2
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 7.5e-12 75.1 240 29.6
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.8e-11 73.2 183 29.5
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.8e-10 70.5 183 30.1
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.7e-09 66.6 34 76.5
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 1.7e-08 63.9 226 28.3
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 4.2e-07 59.3 154 35.7


User provided reference genes

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