Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35951 Davidia involucrata HOM05D003147 ORTHO05D003245 3.4e-63 245.0 138 100.0
Hma1.2p1_2046F.1_g312420 Hydrangea macrophylla HOM05D003147 ORTHO05D003245 1.7e-30 136.3 139 55.4
GSVIVG01009483001 Vitis vinifera HOM05D003147 ORTHO05D003245 1.2e-23 113.6 135 47.4
TAR381G0416 Trochodendron aralioides HOM05D003147 ORTHO05D003245 7.3e-21 104.4 104 58.7
Manes.18G038100 Manihot esculenta HOM05D003147 ORTHO05D003245 8.0e-20 100.9 119 47.1
Thecc.08G005700 Theobroma cacao HOM05D003147 ORTHO05D003245 8.0e-20 100.9 104 55.8
CiPaw.16G042800 Carya illinoinensis HOM05D003147 ORTHO05D003245 1.8e-19 99.8 103 55.3
Duzib041G0245 Durio zibethinus HOM05D003147 ORTHO05D003245 2.3e-19 99.4 102 54.9
Rhsim06G0050900 Rhododendron simsii HOM05D003147 ORTHO05D003245 1.2e-18 97.1 133 45.1
Actinidia22637 Actinidia chinensis HOM05D003147 ORTHO05D003245 4.4e-18 95.1 104 55.8
Gohir.D06G017400 Gossypium hirsutum HOM05D003147 ORTHO05D003245 2.2e-17 92.8 103 53.4
Gorai.010G020300 Gossypium raimondii HOM05D003147 ORTHO05D003245 2.2e-17 92.8 103 53.4
PGR031G1312 Punica granatum HOM05D003147 ORTHO05D003245 2.2e-17 92.8 95 55.8
Sabra14G0019100 Salix brachista HOM05D003147 ORTHO05D003245 3.7e-17 92.0 99 54.5
TWI56G1062 Tripterygium wilfordii HOM05D003147 ORTHO05D003245 8.3e-17 90.9 122 45.9
Gohir.A06G019000 Gossypium hirsutum HOM05D003147 ORTHO05D003245 1.4e-16 90.1 105 50.5
RcHm_v2.0_Chr6g0308051 Rosa chinensis HOM05D003147 ORTHO05D003245 3.2e-16 89.0 119 44.5
Prupe.1G434300 Prunus persica HOM05D003147 ORTHO05D003245 4.1e-16 88.6 98 51.0
FvH4_2g34310 Fragaria vesca HOM05D003147 ORTHO05D003245 5.4e-16 88.2 99 52.5
PGR031G1159 Punica granatum HOM05D003147 ORTHO05D003245 5.4e-16 88.2 95 52.6
Ciclev10000309m.g Citrus clementina HOM05D003147 ORTHO05D003245 7.0e-16 87.8 99 53.5
FAN24G2459 Fragaria x ananassa HOM05D003147 ORTHO05D003245 7.0e-16 87.8 99 52.5
QL02p004661 Quercus lobata HOM05D003147 ORTHO05D003245 7.0e-16 87.8 89 53.9
Atru.chr13.705 Acer truncatum HOM05D003147 ORTHO05D003245 3.5e-15 85.5 95 54.7
FAN15G2685 Fragaria x ananassa HOM05D003147 ORTHO05D003245 1.0e-14 84.0 99 50.5
FAN20G0187 Fragaria x ananassa HOM05D003147 ORTHO05D003245 1.7e-14 83.2 99 49.5
MD15G1081600 Malus domestica HOM05D003147 ORTHO05D003245 1.7e-14 83.2 94 50.0
Eucgr.F02335 Eucalyptus grandis HOM05D003147 ORTHO05D003245 2.3e-14 82.8 96 50.0
SalBow7G4374 Salvia bowleyana HOM05D003147 ORTHO05D003245 3.9e-14 82.0 97 51.5
SHI08266 Sapria himalayana HOM05D003147 ORTHO05D003245 3.9e-14 82.0 89 49.4
Aqoxy6G01308 Aquilegia oxysepala HOM05D003147 ORTHO05D003245 1.5e-13 80.1 116 44.8
Lj5g0008284 Lotus japonicus HOM05D003147 ORTHO05D003245 1.5e-13 80.1 99 49.5
Oeu049988.1 Olea europaea HOM05D003147 ORTHO05D003245 7.3e-13 77.8 126 42.1
COL.COLO4_26521 Corchorus olitorius HOM05D003147 ORTHO05D003245 1.2e-12 77.0 134 40.3
MELO3C016758.2 Cucumis melo HOM05D003147 ORTHO05D003245 1.2e-12 77.0 80 56.2
Nitab4.5_0003091g0020 Nicotiana tabacum HOM05D003147 ORTHO05D003245 1.2e-12 77.0 122 37.7
ClCG05G019930 Citrullus lanatus HOM05D003147 ORTHO05D003245 1.6e-12 76.6 82 54.9
Cpa.g.sc49.28 Carica papaya HOM05D003147 ORTHO05D003245 2.8e-12 75.9 136 41.2
TPR.G3810 Trifolium pratense HOM05D003147 ORTHO05D003245 3.6e-12 75.5 96 45.8
Migut.C00571 Erythranthe guttata HOM05D003147 ORTHO05D003245 4.7e-12 75.1 117 38.5
Sopen12g030700 Solanum pennellii HOM05D003147 ORTHO05D003245 6.2e-12 74.7 121 42.1
CsaV3_4G034370 Cucumis sativus L. HOM05D003147 ORTHO05D003245 8.1e-12 74.3 79 54.4
Nn5g30284 Nelumbo nucifera HOM05D003147 ORTHO05D003245 8.1e-12 74.3 101 47.5
EL10Ac6g14533 Beta vulgaris HOM05D003147 ORTHO05D003245 1.1e-11 73.9 97 42.3
Sed0005207 Sechium edule HOM05D003147 ORTHO05D003245 1.1e-11 73.9 94 47.9
Glyma.14G083400 Glycine max HOM05D003147 ORTHO05D003245 1.4e-11 73.6 100 46.0
HanXRQChr09g0267541 Helianthus annuus HOM05D003147 ORTHO05D003245 1.4e-11 73.6 86 48.8
MSTRG.25086 Avicennia marina HOM05D003147 ORTHO05D003245 2.3e-11 72.8 94 50.0
CAN.G1337.32 Capsicum annuum HOM05D003147 ORTHO05D003245 3.1e-11 72.4 107 40.2
Lsat_1_v5_gn_4_126480 Lactuca sativa HOM05D003147 ORTHO05D003245 1.2e-10 70.5 89 44.9
Lalb_Chr14g0368631 Lupinus albus HOM05D003147 ORTHO05D003245 4.4e-10 68.6 102 44.1
Phvul.001G022600 Phaseolus vulgaris HOM05D003147 ORTHO05D003245 7.5e-10 67.8 100 44.0
Zm00001eb019330 Zea mays HOM05D003147 ORTHO05D003245 3.7e-09 65.5 96 41.7
arahy.Tifrunner.gnm1.ann1.191BIJ Arachis hypogaea HOM05D003147 ORTHO05D003245 4.9e-09 65.1 98 42.9
arahy.Tifrunner.gnm1.ann1.RR4AU3 Arachis hypogaea HOM05D003147 ORTHO05D003245 4.9e-09 65.1 98 42.9
Thhalv10022632m.g Eutrema salsugineum HOM05D003147 ORTHO05D003245 4.9e-09 65.1 84 46.4
Medtr1g019290 Medicago truncatula HOM05D003147 ORTHO05D003245 6.4e-09 64.7 99 41.4
BcaB07g33872 Brassica carinata HOM05D003147 ORTHO05D003245 3.2e-08 62.4 82 45.1
Hund19148 Selenicereus undatus HOM05D003147 ORTHO05D003245 3.2e-08 62.4 135 34.1
Carub.0001s3565 Capsella rubella HOM05D003147 ORTHO05D003245 4.1e-08 62.0 87 40.2
BraA10t42944Z Brassica rapa HOM05D003147 ORTHO05D003245 5.4e-08 61.6 82 45.1
VMungo0647G1146 Vigna mungo HOM05D002191 ORTHO05D002292 5.4e-08 61.6 96 39.6
BolC6t35275H Brassica oleracea HOM05D003147 ORTHO05D003245 7.1e-08 61.2 88 43.2
A10p06940 Brassica napus HOM05D003147 ORTHO05D003245 9.2e-08 60.8 82 42.7
Aa31LG3G17380 Aethionema arabicum HOM05D003147 ORTHO05D003245 1.2e-07 60.5 93 44.1
BcaC08g42900 Brassica carinata HOM05D003147 ORTHO05D003245 1.2e-07 60.5 89 42.7
C06p01230 Brassica napus HOM05D003147 ORTHO05D003245 2.7e-07 59.3 86 41.9
ECA232G3719 Erigeron canadensis HOM05D002191 ORTHO05D002292 2.7e-07 59.3 125 34.4
Aa31sc108G110 Aethionema arabicum HOM05D003147 ORTHO05D003245 3.5e-07 58.9 98 41.8
C06p01330 Brassica napus HOM05D003147 ORTHO05D003245 3.5e-07 58.9 86 41.9
Sp1g34080 Schrenkiella parvula HOM05D003147 ORTHO05D003245 7.8e-07 57.8 79 44.3
Glyma.17G241702 Glycine max HOM05D003147 ORTHO05D003245 1.0e-06 57.4 84 45.2
PSO541G6107 Papaver somniferum HOM05D003147 ORTHO05D003245 1.0e-06 57.4 120 32.5
PSO675G4742 Papaver somniferum HOM05D003147 ORTHO05D003245 1.3e-06 57.0 120 32.5
CARHR036360 Cardamine hirsuta HOM05D003147 ORTHO05D003245 1.7e-06 56.6 82 41.5
Solyc12g088810.3 Solanum lycopersicum HOM05D003147 ORTHO05D003245 2.3e-06 56.2 110 35.5
MD08G1099100 Malus domestica HOM05D003147 ORTHO05D003245 8.6e-06 54.3 34 67.6


User provided reference genes

Program Settings