Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35922 Davidia involucrata HOM05D009444 ORTHO05D011524 3.7e-34 147.9 90 100.0
MD15G1076900 Malus domestica HOM05D009444 ORTHO05D011524 1.2e-13 79.7 86 55.8
QL02p003853 Quercus lobata HOM05D009444 ORTHO05D011524 4.7e-13 77.8 90 52.2
MD08G1092300 Malus domestica HOM05D009444 ORTHO05D011524 5.3e-12 74.3 79 51.9
TAR381G0778 Trochodendron aralioides HOM05D009444 ORTHO05D011524 6.9e-12 73.9 85 50.6
RcHm_v2.0_Chr6g0308771 Rosa chinensis HOM05D009444 ORTHO05D011524 2.0e-11 72.4 96 45.8
Migut.C00529 Erythranthe guttata HOM05D009444 ORTHO05D011524 5.8e-11 70.9 83 45.8
FvH4_2g33780 Fragaria vesca HOM05D009444 ORTHO05D011524 1.3e-10 69.7 87 46.0
FAN27G1537 Fragaria x ananassa HOM05D009444 ORTHO05D011524 1.7e-10 69.3 87 46.0
FAN24G0182 Fragaria x ananassa HOM05D009444 ORTHO05D011524 2.2e-10 68.9 87 46.0
MSTRG.25066 Avicennia marina HOM05D009444 ORTHO05D011524 6.4e-10 67.4 82 45.1
Manes.18G041800 Manihot esculenta HOM05D009444 ORTHO05D011524 6.4e-10 67.4 87 47.1
Prupe.1G430300 Prunus persica HOM05D009444 ORTHO05D011524 6.4e-10 67.4 89 44.9
FAN15G0606 Fragaria x ananassa HOM05D001213 ORTHO05D001042 1.4e-09 66.2 86 44.2
Oeu044856.1 Olea europaea HOM05D009444 ORTHO05D011524 1.4e-09 66.2 84 41.7
Nitab4.5_0001984g0020 Nicotiana tabacum HOM05D022333 ORTHO05D025941 1.9e-09 65.9 88 40.9
Sabra02G0096200 Salix brachista HOM05D009444 ORTHO05D011524 1.9e-09 65.9 88 48.9
Cpa.g.sc21.149 Carica papaya HOM05D009444 ORTHO05D011524 4.2e-09 64.7 86 44.2
Thecc.08G000600 Theobroma cacao HOM05D009444 ORTHO05D011524 5.4e-09 64.3 78 44.9
Atru.chr13.754 Acer truncatum HOM05D009444 ORTHO05D011524 7.1e-09 63.9 89 42.7
Actinidia38083 Actinidia chinensis HOM05D001213 ORTHO05D001042 9.3e-09 63.5 91 47.3
Cfa018053 Carpinus fangiana HOM05D009444 ORTHO05D011524 9.3e-09 63.5 57 61.4
Gohir.D06G019090 Gossypium hirsutum HOM05D009444 ORTHO05D011524 6.0e-08 60.8 81 38.3
Gorai.010G023100 Gossypium raimondii HOM05D009444 ORTHO05D011524 6.0e-08 60.8 81 38.3
Potri.002G122800 Populus trichocarpa HOM05D009444 ORTHO05D011524 6.0e-08 60.8 88 46.6
MD08G1092400 Malus domestica HOM05D009444 ORTHO05D011524 7.8e-08 60.5 86 44.2
SalBow7G1359 Salvia bowleyana HOM05D009444 ORTHO05D011524 7.8e-08 60.5 51 58.8
HanXRQChr10g0309641 Helianthus annuus HOM05D009444 ORTHO05D011524 1.0e-07 60.1 54 55.6
COL.COLO4_10112 Corchorus olitorius HOM05D009444 ORTHO05D011524 1.3e-07 59.7 87 42.5
Gohir.A06G021500 Gossypium hirsutum HOM05D009444 ORTHO05D011524 1.7e-07 59.3 81 38.3
Lsat_1_v5_gn_1_22580 Lactuca sativa HOM05D001213 ORTHO05D001042 6.6e-07 57.4 53 54.7
CAN.G1621.2 Capsicum annuum HOM05D001213 ORTHO05D001042 8.7e-07 57.0 83 38.6
ECA247G1753 Erigeron canadensis HOM05D009444 ORTHO05D011524 1.5e-06 56.2 55 52.7
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 5.6e-06 54.3 76 50.0
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 5.6e-06 54.3 80 43.8
Rhsim07G0225100 Rhododendron simsii HOM05D009444 ORTHO05D338597 5.6e-06 54.3 39 71.8
ClCG08G016170 Citrullus lanatus HOM05D031940 ORTHO05D011524 9.6e-06 53.5 90 35.6


User provided reference genes

Program Settings