Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 3.1e-243 844.7 430 100.0
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 3.4e-202 708.4 479 75.4
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 3.4e-202 708.4 481 75.9
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 7.1e-200 700.7 480 75.4
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.1e-199 699.1 479 76.2
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 5.1e-198 694.5 479 75.4
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 1.5e-197 693.0 482 74.7
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 5.7e-197 691.0 478 74.9
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 5.7e-197 691.0 481 74.8
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 7.4e-197 690.6 482 74.7
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.6e-196 689.5 481 73.2
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.6e-196 689.5 481 73.2
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 4.5e-194 681.4 478 73.0
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 3.8e-193 678.3 483 72.3
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 3.8e-193 678.3 479 73.1
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 6.5e-193 677.6 481 72.1
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 1.4e-192 676.4 478 73.0
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 5.5e-192 674.5 479 73.5
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.2e-191 673.3 479 72.4
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.6e-191 672.9 479 72.4
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.6e-191 672.9 479 72.2
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 6.1e-191 671.0 479 72.2
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 3.3e-189 665.2 478 71.8
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 7.4e-189 664.1 479 70.8
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 9.7e-189 663.7 480 70.6
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 2.2e-188 662.5 482 72.2
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 3.7e-188 661.8 475 71.2
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 4.8e-188 661.4 483 70.4
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 6.3e-188 661.0 482 70.3
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 4.1e-187 658.3 477 71.7
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 4.1e-187 658.3 478 70.9
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 5.3e-187 657.9 477 71.5
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 1.5e-186 656.4 482 71.4
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 2.0e-186 656.0 481 70.5
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 2.6e-186 655.6 481 70.9
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 3.4e-186 655.2 478 70.9
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 5.9e-186 654.4 480 70.6
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.0e-185 653.7 480 70.6
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 2.2e-185 652.5 478 69.5
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 8.5e-185 650.6 477 71.1
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 3.2e-184 648.7 478 71.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 7.2e-184 647.5 477 69.6
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 9.4e-184 647.1 477 70.6
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 2.1e-183 646.0 483 70.2
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 6.1e-183 644.4 478 68.6
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 7.9e-183 644.0 477 69.6
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 3.0e-182 642.1 481 69.6
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 4.4e-181 638.3 418 78.7
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 2.2e-180 636.0 479 68.9
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 3.7e-180 635.2 461 70.9
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 6.3e-180 634.4 478 69.0
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 1.1e-179 633.6 478 69.2
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.1e-179 633.6 479 67.8
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 7.0e-179 630.9 479 68.5
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 2.6e-178 629.0 474 70.5
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 7.7e-178 627.5 480 68.1
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 7.7e-178 627.5 478 67.4
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.9e-176 622.9 466 68.7
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.9e-176 622.9 458 69.7
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 5.5e-176 621.3 480 67.3
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.6e-175 619.8 466 68.2
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 3.6e-175 618.6 467 69.0
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 3.6e-175 618.6 467 69.0
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 3.6e-175 618.6 478 67.2
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.3e-174 615.9 478 68.2
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 5.2e-174 614.8 477 67.7
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 6.7e-174 614.4 481 67.2
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 6.7e-174 614.4 479 66.8
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 8.8e-174 614.0 479 66.6
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 2.0e-173 612.8 470 67.9
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 3.3e-173 612.1 477 67.5
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.4e-173 611.7 480 65.8
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 7.4e-173 610.9 477 67.5
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 7.4e-173 610.9 426 75.1
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.3e-172 610.1 477 66.9
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 2.2e-172 609.4 470 67.0
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.8e-172 609.0 438 72.1
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.8e-172 609.0 463 68.3
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.8e-172 609.0 463 68.3
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.8e-172 609.0 451 69.6
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 3.7e-172 608.6 470 66.8
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.1e-171 607.1 479 66.4
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 1.4e-171 606.7 463 67.4
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 3.1e-171 605.5 470 66.6
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 3.1e-171 605.5 477 65.6
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.1e-171 605.5 483 64.6
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 7.0e-171 604.4 479 65.8
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 9.1e-171 604.0 480 65.4
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.6e-170 602.4 463 68.0
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 5.9e-170 601.3 483 64.2
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 3.8e-169 598.6 477 65.0
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 2.5e-168 595.9 462 66.2
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 7.2e-168 594.3 481 64.7
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.2e-167 593.6 428 72.0
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.1e-167 592.8 478 66.5
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 4.7e-167 591.7 472 64.0
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 1.8e-163 579.7 477 63.3
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 2.9e-161 572.4 481 64.7
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 1.1e-160 570.5 470 63.4
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.8e-156 555.1 480 59.0
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.1e-155 553.9 480 58.8
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.1e-155 552.0 480 58.1
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 3.5e-154 548.9 473 59.6
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.3e-153 546.2 409 68.7
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.0e-150 537.3 478 61.3
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 3.4e-149 532.3 470 57.7
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 8.6e-145 517.7 478 59.0
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.8e-142 510.0 462 57.6
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 4.0e-142 508.8 464 56.7
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 2.4e-139 499.6 472 54.4
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 5.0e-137 491.9 319 76.8
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 8.0e-135 484.6 478 55.2
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 2.1e-130 469.9 467 50.7
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.8e-126 456.8 467 52.5
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 4.4e-125 452.2 466 51.5
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 3.2e-123 446.0 472 52.1
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 5.6e-112 408.7 466 46.6
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 6.4e-108 395.2 372 60.2
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 7.8e-106 388.3 424 54.5
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 2.8e-103 379.8 319 64.9
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 2.7e-98 363.2 329 60.2
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 3.1e-94 349.7 483 42.0
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 1.8e-89 334.0 482 40.9
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 8.2e-79 298.5 163 87.7
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 5.7e-48 196.1 121 79.3
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.0e-36 158.7 469 26.0
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 2.1e-34 151.0 91 78.0
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 3.5e-29 133.7 72 86.1
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 9.2e-22 109.0 307 25.1
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 2.1e-18 97.8 71 74.6
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 2.3e-09 67.8 40 77.5
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 2.3e-09 67.8 402 22.1
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 8.4e-07 59.3 415 24.6
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 7.1e-06 56.2 28 89.3


User provided reference genes

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