Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35802 Davidia involucrata HOM05D013363 ORTHO05D015094 1.3e-148 529.6 254 100.0
Dinv35834 Davidia involucrata HOM05D013363 ORTHO05D015094 2.2e-116 422.5 236 86.0
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-58 229.6 244 52.5
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 2.7e-53 213.0 242 51.7
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 7.8e-53 211.5 257 51.0
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 4.4e-48 195.7 245 46.5
Dinv01639 Davidia involucrata HOM05D013363 ORTHO05D015094 8.9e-41 171.4 227 47.6
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 2.7e-37 159.8 181 49.7
Dinv35655 Davidia involucrata HOM05D013363 ORTHO05D015094 6.6e-28 128.6 200 44.0
Dinv35599 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-26 123.2 163 44.8
Dinv35657 Davidia involucrata HOM05D013363 ORTHO05D015094 9.9e-24 114.8 198 39.9
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 6.9e-17 92.0 195 36.4
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 3.8e-15 86.3 151 35.1
Lju926A3G38 Lonicera japonica HOM05D008418 ORTHO05D011146 2.8e-10 70.1 140 28.6
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 4.8e-10 69.3 105 41.9
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-09 67.0 121 32.2
COL.COLO4_17456 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.1e-09 66.6 176 27.3
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 4.0e-09 66.2 140 31.4
Migut.N01004 Erythranthe guttata HOM05D003569 ORTHO05D004178 6.9e-09 65.5 99 36.4
Ah.01g024560 Amaranthus hybridus HOM05D002370 ORTHO05D003878 9.0e-09 65.1 122 35.2
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 9.0e-09 65.1 120 33.3
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 9.0e-09 65.1 120 33.3
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.0e-09 65.1 142 33.8
EL10Ac9g22170 Beta vulgaris HOM05D003569 ORTHO05D004178 1.5e-08 64.3 99 34.3
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 1.5e-08 64.3 110 35.5
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 2.0e-08 63.9 142 33.8
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.6e-08 63.5 170 27.1
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.4e-08 63.2 99 38.4
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 3.4e-08 63.2 110 33.6
Dinv25051 Davidia involucrata HOM05D011324 ORTHO05D013448 3.4e-08 63.2 159 30.2
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 4.5e-08 62.8 112 33.0
Carub.0007s1979 Capsella rubella HOM05D000249 ORTHO05D000206 4.5e-08 62.8 103 35.0
Lj1g0013672 Lotus japonicus HOM05D000249 ORTHO05D000206 4.5e-08 62.8 145 30.3
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 5.8e-08 62.4 114 36.8
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 7.6e-08 62.0 148 31.1
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.6e-08 62.0 146 29.5
BcaC05g25104 Brassica carinata HOM05D000249 ORTHO05D014429 9.9e-08 61.6 149 29.5
AL4G22950 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-07 61.2 156 30.1
CARHR221070 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.3e-07 61.2 113 34.5
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 1.3e-07 61.2 154 31.2
C01p08810 Brassica napus HOM05D000249 ORTHO05D000206 1.7e-07 60.8 94 33.0
BolC1t00871H Brassica oleracea HOM05D000249 ORTHO05D000206 1.7e-07 60.8 94 33.0
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 1.7e-07 60.8 149 28.9
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.7e-07 60.8 103 39.8
AL7G12760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.2e-07 60.5 110 35.5
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.2e-07 60.5 117 36.8
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-07 60.5 107 31.8
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.2e-07 60.5 108 35.2
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.9e-07 60.1 109 33.9
BcaC05g25412 Brassica carinata HOM05D000249 ORTHO05D014429 2.9e-07 60.1 150 29.3
A06p08740 Brassica napus HOM05D000249 ORTHO05D014429 2.9e-07 60.1 134 32.8
C05p12880 Brassica napus HOM05D000249 ORTHO05D014429 2.9e-07 60.1 150 29.3
BolC5t30035H Brassica oleracea HOM05D000249 ORTHO05D014429 2.9e-07 60.1 150 29.3
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.8e-07 59.7 107 34.6
PSO170G0139 Papaver somniferum HOM05D000667 ORTHO05D003095 3.8e-07 59.7 110 30.0
Psat1g217920 Pisum sativum HOM05D003569 ORTHO05D004178 3.8e-07 59.7 117 31.6
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-07 59.7 101 33.7
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.9e-07 59.3 101 34.7
Carub.0001s1903 Capsella rubella HOM05D000249 ORTHO05D000206 4.9e-07 59.3 148 27.7
CARHR132630 Cardamine hirsuta HOM05D000249 ORTHO05D000206 4.9e-07 59.3 146 32.2
Mapoly0062s0033 Marchantia polymorpha HOM05D003852 ORTHO05D003095 4.9e-07 59.3 106 34.9
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 4.9e-07 59.3 143 29.4
AUR62030873 Chenopodium quinoa HOM05D003569 ORTHO05D004178 6.4e-07 58.9 102 33.3
BraA06t24071Z Brassica rapa HOM05D000249 ORTHO05D014429 8.4e-07 58.5 89 34.8
Carub.0007s0183 Capsella rubella HOM05D000249 ORTHO05D000206 8.4e-07 58.5 111 33.3
Haze_19846 Corylus avellana HOM05D027064 ORTHO05D009743 8.4e-07 58.5 126 27.8
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 8.4e-07 58.5 147 27.9
TPR.G13602 Trifolium pratense HOM05D003569 ORTHO05D004178 8.4e-07 58.5 59 42.4
Nitab4.5_0005416g0020 Nicotiana tabacum HOM05D003569 ORTHO05D004178 1.1e-06 58.2 61 37.7
AL7G16090 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-06 57.8 143 30.1
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 1.4e-06 57.8 107 31.8
Thhalv10025393m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.4e-06 57.8 161 29.8
Nitab4.5_0002865g0070 Nicotiana tabacum HOM05D003569 ORTHO05D004178 1.4e-06 57.8 61 37.7
A02p14670 Brassica napus HOM05D000249 ORTHO05D000206 1.9e-06 57.4 105 35.2
BraA02t06534Z Brassica rapa HOM05D000249 ORTHO05D000206 1.9e-06 57.4 105 35.2
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 1.9e-06 57.4 143 29.4
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.9e-06 57.4 107 31.8
VMungo1309G0008 Vigna mungo HOM05D003569 ORTHO05D004178 1.9e-06 57.4 62 38.7
BcaC03g15452 Brassica carinata HOM05D000249 ORTHO05D000206 2.4e-06 57.0 95 34.7
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 2.4e-06 57.0 114 35.1
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 2.4e-06 57.0 114 35.1
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 2.4e-06 57.0 114 35.1
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 2.4e-06 57.0 143 28.7
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 2.4e-06 57.0 153 30.1
COL.COLO4_15708 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.4e-06 57.0 109 30.3
COL.COLO4_16495 Corchorus olitorius HOM05D003569 ORTHO05D004178 2.4e-06 57.0 103 30.1
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.4e-06 57.0 119 29.4
Aqoxy6G00478 Aquilegia oxysepala HOM05D000249 ORTHO05D000206 3.2e-06 56.6 143 30.1
Ca_00122_v3 Cicer arietinum L. HOM05D003569 ORTHO05D004178 3.2e-06 56.6 62 37.1
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.2e-06 56.6 107 30.8
Ah.01g007150 Amaranthus hybridus HOM05D003569 ORTHO05D004178 4.2e-06 56.2 59 39.0
A02p18850 Brassica napus HOM05D000249 ORTHO05D000206 4.2e-06 56.2 95 34.7
BraA02t06929Z Brassica rapa HOM05D000249 ORTHO05D000206 4.2e-06 56.2 95 34.7
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-06 56.2 106 34.9
Eucgr.H04148 Eucalyptus grandis HOM05D000667 ORTHO05D003095 4.2e-06 56.2 109 29.4
Peaxi162Scf00001g00033 Petunia axillaris HOM05D003569 ORTHO05D004178 4.2e-06 56.2 61 37.7
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-06 56.2 104 29.8
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 4.2e-06 56.2 70 35.7
AL2G17690 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.5e-06 55.8 101 34.7
arahy.Tifrunner.gnm1.ann1.G2M5AZ Arachis hypogaea HOM05D003569 ORTHO05D004178 5.5e-06 55.8 99 31.3
Dinv19486 Davidia involucrata HOM05D000249 ORTHO05D000206 5.5e-06 55.8 138 29.0
Thhalv10027175m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.5e-06 55.8 147 31.3
Medtr2g008440 Medicago truncatula HOM05D003569 ORTHO05D004178 5.5e-06 55.8 61 37.7
Os02g0574900 Oryza sativa ssp. japonica HOM05D003569 ORTHO05D004178 5.5e-06 55.8 59 42.4
Phvul.009G027300 Phaseolus vulgaris HOM05D003569 ORTHO05D004178 5.5e-06 55.8 158 29.1
Zm00001eb182900 Zea mays HOM05D003569 ORTHO05D004178 5.5e-06 55.8 59 40.7
A08p23270 Brassica napus HOM05D000249 ORTHO05D000206 7.1e-06 55.5 111 34.2
A10p12790 Brassica napus HOM05D000249 ORTHO05D000206 7.1e-06 55.5 103 36.9
BraA08t34282Z Brassica rapa HOM05D000249 ORTHO05D000206 7.1e-06 55.5 111 34.2
Cfa016866 Carpinus fangiana HOM05D027064 ORTHO05D009743 7.1e-06 55.5 218 22.5
CAN.G523.92 Capsicum annuum HOM05D003569 ORTHO05D004178 9.3e-06 55.1 61 36.1
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 9.3e-06 55.1 106 34.9
PGSC0003DMG400012568 Solanum tuberosum HOM05D003569 ORTHO05D004178 9.3e-06 55.1 61 36.1


User provided reference genes

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