Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 9.2e-303 1042.7 514 100.0
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 4.9e-264 914.1 514 86.6
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 2.4e-255 885.2 515 83.7
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.3e-248 862.8 548 77.7
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.4e-247 859.4 512 82.2
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 2.1e-246 855.5 514 82.7
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 7.9e-246 853.6 492 84.3
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 2.3e-245 852.0 514 81.5
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 3.9e-245 851.3 452 93.1
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 8.7e-245 850.1 511 81.0
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 4.8e-243 844.3 514 81.5
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 3.1e-242 841.6 514 81.1
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 5.3e-242 840.9 514 79.6
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 1.2e-241 839.7 512 80.9
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 1.2e-241 839.7 514 79.4
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.2e-241 839.7 511 82.2
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.2e-241 839.7 513 79.7
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 2.0e-241 839.0 511 80.2
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.6e-241 838.6 514 80.9
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 1.7e-240 835.9 511 79.6
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 1.1e-239 833.2 513 80.3
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 4.2e-239 831.2 513 79.9
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.6e-238 829.3 601 70.5
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.1e-238 828.9 514 78.0
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 1.8e-237 825.9 512 80.3
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 3.9e-237 824.7 513 79.1
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 5.1e-237 824.3 514 79.2
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 1.9e-236 822.4 479 85.2
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 3.3e-236 821.6 512 80.3
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 8.2e-235 817.0 514 77.4
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 1.4e-234 816.2 511 79.5
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 1.2e-233 813.1 513 79.1
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 1.5e-233 812.8 514 77.6
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 2.6e-233 812.0 514 76.8
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 2.6e-233 812.0 514 77.0
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 7.7e-233 810.4 515 78.4
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 1.0e-232 810.1 515 78.4
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 1.7e-232 809.3 514 76.7
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 3.2e-231 805.1 513 77.6
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 4.2e-231 804.7 512 78.1
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 5.5e-231 804.3 511 76.9
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 7.2e-231 803.9 514 75.9
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 3.6e-230 801.6 512 76.4
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 1.0e-229 800.0 508 78.0
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 1.4e-229 799.7 514 76.1
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 2.3e-229 798.9 514 74.3
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 6.7e-229 797.3 511 76.1
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 8.8e-229 797.0 514 76.5
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 1.5e-228 796.2 513 75.8
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 2.0e-228 795.8 482 81.5
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 1.7e-227 792.7 515 77.1
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 8.2e-227 790.4 516 76.0
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 1.8e-226 789.3 507 76.1
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 2.4e-226 788.9 512 74.6
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.2e-225 786.6 514 76.1
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 2.0e-225 785.8 526 73.0
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 7.7e-225 783.9 511 75.7
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 1.7e-224 782.7 512 75.6
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 2.9e-224 781.9 514 73.9
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 2.5e-223 778.9 509 75.6
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 3.2e-223 778.5 512 75.4
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 4.2e-223 778.1 515 75.3
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 4.2e-223 778.1 567 70.5
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 2.1e-222 775.8 552 70.7
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.6e-222 775.0 513 75.8
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 4.7e-222 774.6 512 74.6
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.1e-222 774.2 506 76.1
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.4e-221 773.1 506 76.1
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 2.3e-221 772.3 512 75.2
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 3.0e-221 771.9 512 75.2
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 3.9e-221 771.5 512 74.8
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 5.1e-221 771.2 552 70.1
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 5.1e-221 771.2 513 73.7
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 6.7e-221 770.8 512 75.2
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 6.7e-221 770.8 512 74.4
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 6.7e-221 770.8 520 73.5
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 1.1e-220 770.0 512 74.4
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 2.0e-220 769.2 512 74.4
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 2.0e-220 769.2 517 74.5
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 2.6e-220 768.8 512 74.4
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 4.4e-220 768.1 513 74.7
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 4.4e-220 768.1 513 74.7
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 4.4e-220 768.1 513 75.2
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 7.4e-220 767.3 512 73.8
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 1.7e-219 766.1 513 74.7
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 3.7e-219 765.0 515 72.0
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 4.8e-219 764.6 515 73.8
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 8.2e-219 763.8 514 74.1
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 8.2e-219 763.8 480 78.3
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 1.1e-218 763.5 513 73.9
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 5.3e-218 761.1 512 74.2
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 7.0e-218 760.8 515 73.8
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 1.5e-217 759.6 511 72.4
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 2.0e-217 759.2 513 73.5
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 3.5e-217 758.4 478 77.8
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 7.7e-217 757.3 514 73.2
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.3e-216 756.5 507 73.4
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 1.4e-213 746.5 512 71.3
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 6.7e-213 744.2 514 72.2
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 8.8e-213 743.8 494 74.9
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 7.4e-212 740.7 513 72.3
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 7.4e-212 740.7 514 73.3
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.3e-211 740.0 513 73.5
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.2e-211 739.2 514 73.2
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 2.8e-211 738.8 502 71.9
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.8e-211 738.8 513 73.5
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 2.4e-210 735.7 471 77.5
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 7.0e-210 734.2 584 64.6
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 4.5e-209 731.5 500 72.4
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 3.8e-208 728.4 526 71.1
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.2e-206 723.4 528 69.1
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 8.0e-206 720.7 466 76.0
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.3e-205 719.2 511 69.7
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.0e-204 716.1 538 69.7
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 2.2e-203 712.6 511 68.9
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 7.0e-202 707.6 504 69.0
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 1.6e-201 706.4 512 68.4
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 3.8e-200 701.8 516 70.7
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 2.1e-198 696.0 515 66.8
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 8.8e-197 690.6 454 76.2
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 5.0e-192 674.9 456 73.2
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 2.8e-187 659.1 404 78.2
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 2.8e-187 659.1 513 65.9
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 7.0e-186 654.4 404 78.5
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 4.4e-172 608.6 492 65.9
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 5.4e-170 601.7 664 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 2.2e-163 579.7 532 56.8
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 5.6e-159 565.1 545 54.1
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 4.0e-149 532.3 421 63.2
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 1.1e-146 524.2 457 60.2
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 6.9e-141 505.0 514 54.9
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 5.6e-135 485.3 339 71.1
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 6.9e-133 478.4 273 82.8
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 1.7e-123 447.2 275 82.2
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 6.3e-118 428.7 279 74.6
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 1.7e-94 350.9 244 71.7
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.8e-94 350.1 212 79.2
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 1.1e-93 348.2 219 80.8
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 4.8e-86 322.8 240 65.0
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 3.2e-82 310.1 264 60.6
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 5.4e-77 292.7 508 40.2
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 1.5e-63 248.1 556 32.7
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 1.5e-58 231.5 393 35.1
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.0e-47 194.5 121 76.9
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 1.7e-46 191.4 138 68.8
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.3e-43 181.8 189 52.4
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.4e-40 171.0 110 77.3
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 4.4e-39 166.8 112 69.6
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.6e-33 148.3 251 39.8
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 2.8e-33 147.5 188 40.4
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 4.8e-33 146.7 251 39.4
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 1.9e-29 134.8 68 89.7
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 3.6e-25 120.6 63 92.1
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 9.6e-18 95.9 170 30.0
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 8.1e-17 92.8 73 68.5
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 6.5e-14 83.2 113 45.1
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 3.2e-13 80.9 82 53.7
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.2e-12 79.0 87 50.6
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 3.0e-11 74.3 147 34.0
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 2.8e-09 67.8 126 31.7
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 4.8e-09 67.0 36 86.1
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 2.0e-07 61.6 74 41.9
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.4e-07 60.8 36 75.0
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 58.9 109 41.3


User provided reference genes

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