Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.2e-57 226.1 99 100.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 8.2e-51 203.4 98 90.8
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 3.1e-50 201.4 98 89.8
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.1e-50 201.1 100 87.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 5.3e-50 200.7 100 88.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 9.1e-50 199.9 100 86.0
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 9.1e-50 199.9 100 87.0
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 1.6e-49 199.1 100 88.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 1.6e-49 199.1 100 88.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 2.0e-49 198.7 99 84.8
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.7e-49 198.4 100 87.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 4.5e-49 197.6 100 86.0
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 4.5e-49 197.6 99 82.8
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 4.5e-49 197.6 99 82.8
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 5.9e-49 197.2 100 87.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 7.7e-49 196.8 99 83.8
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 7.7e-49 196.8 97 84.5
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.0e-48 196.4 100 86.0
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 1.3e-48 196.1 100 85.0
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 2.9e-48 194.9 99 81.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 2.9e-48 194.9 100 85.0
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 6.5e-48 193.7 99 83.8
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 8.5e-48 193.4 100 85.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.1e-47 193.0 100 84.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 1.9e-47 192.2 100 84.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 4.2e-47 191.0 99 79.8
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 5.5e-47 190.7 99 83.8
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 7.2e-47 190.3 100 83.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 9.4e-47 189.9 99 82.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 9.4e-47 189.9 100 84.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 9.4e-47 189.9 100 81.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.2e-46 189.5 100 83.0
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 1.6e-46 189.1 99 82.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 1.6e-46 189.1 99 82.8
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 1.6e-46 189.1 99 82.8
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 2.1e-46 188.7 100 83.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 2.7e-46 188.3 99 78.8
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 3.6e-46 188.0 100 81.0
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 4.7e-46 187.6 99 79.8
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 81.8
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 6.1e-46 187.2 98 82.7
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 6.1e-46 187.2 100 81.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 6.1e-46 187.2 100 81.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 6.1e-46 187.2 100 81.0
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 81.8
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.0e-45 186.4 100 81.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.4e-45 186.0 100 82.0
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.8e-45 185.7 100 80.0
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.3e-45 185.3 100 79.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 2.3e-45 185.3 99 80.8
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 4.0e-45 184.5 98 80.6
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 4.0e-45 184.5 100 81.0
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 4.0e-45 184.5 99 77.8
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 5.2e-45 184.1 99 80.8
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 6.8e-45 183.7 85 96.5
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 2.6e-44 181.8 95 84.2
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 3.4e-44 181.4 99 75.8
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 5.7e-44 180.6 100 76.0
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.7e-43 179.1 99 75.8
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 75.8
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.8e-43 178.3 100 76.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 76.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 3.7e-43 177.9 100 76.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 6.3e-43 177.2 100 75.0
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 3.1e-42 174.9 99 72.7
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 5.4e-42 174.1 99 73.7
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 5.4e-42 174.1 99 73.7
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 73.0
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.2e-41 172.9 100 74.0
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 2.0e-41 172.2 97 74.2
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 74.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 4.5e-41 171.0 100 73.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 7.7e-41 170.2 98 73.5
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 74.5
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 3.8e-40 167.9 98 72.4
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.9e-39 165.6 88 81.8
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 8.8e-37 156.8 99 63.6
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.5e-36 156.0 99 62.6
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 1.5e-36 156.0 134 56.0
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.0e-36 155.6 100 71.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 2.0e-36 155.6 100 71.0
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.4e-36 154.8 87 77.0
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.1e-34 149.8 99 64.6
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.8e-34 149.1 98 64.3
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 4.1e-34 147.9 169 45.0
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 5.9e-33 144.1 110 58.2
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 3.3e-31 138.3 99 59.6
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.2e-30 136.3 71 83.1
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 3.2e-26 121.7 101 57.4
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 7.8e-25 117.1 101 56.4
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 3.1e-21 105.1 102 53.9
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 2.0e-20 102.4 58 75.9
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 3.5e-17 91.7 100 42.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.1e-13 80.1 41 85.4
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.3e-11 73.2 40 80.0
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 1.7e-11 72.8 76 43.4
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 4.9e-11 71.2 76 40.8
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 4.1e-10 68.2 30 90.0
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 5.4e-10 67.8 76 40.8
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 3.0e-08 62.0 88 34.1


User provided reference genes

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