Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35741 Davidia involucrata HOM05D000187 ORTHO05D005916 6.0e-277 956.8 468 100.0
CSS0014211 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 9.2e-177 624.0 424 75.0
GSVIVG01025655001 Vitis vinifera HOM05D000187 ORTHO05D005916 1.6e-160 570.1 433 68.4
QL07p044805 Quercus lobata HOM05D000187 ORTHO05D005916 1.2e-152 543.9 432 62.0
Thecc.05G057000 Theobroma cacao HOM05D000187 ORTHO05D005916 9.3e-145 517.7 433 60.3
Ciclev10011412m.g Citrus clementina HOM05D000187 ORTHO05D005916 2.2e-141 506.5 433 60.3
CiPaw.09G178000 Carya illinoinensis HOM05D000187 ORTHO05D005916 4.1e-140 502.3 432 61.8
Duzib093G0363 Durio zibethinus HOM05D000187 ORTHO05D005916 1.5e-139 500.4 433 59.6
Actinidia13093 Actinidia chinensis HOM05D000187 ORTHO05D005916 4.2e-137 492.3 407 64.6
Prupe.6G238800 Prunus persica HOM05D000187 ORTHO05D005916 4.6e-136 488.8 435 59.3
Gohir.A09G150900 Gossypium hirsutum HOM05D000187 ORTHO05D005916 2.3e-135 486.5 431 57.5
Manes.08G005200 Manihot esculenta HOM05D000187 ORTHO05D005916 3.9e-135 485.7 431 58.5
Gohir.D09G146500 Gossypium hirsutum HOM05D000187 ORTHO05D005916 8.8e-135 484.6 431 57.3
Atru.chr8.1885 Acer truncatum HOM05D000187 ORTHO05D005916 1.1e-134 484.2 433 58.9
Duzib128G0619 Durio zibethinus HOM05D000187 ORTHO05D005916 1.1e-134 484.2 433 58.9
Gorai.006G167700 Gossypium raimondii HOM05D000187 ORTHO05D005916 1.5e-134 483.8 431 57.5
Cc06_g03760 Coffea canephora HOM05D000187 ORTHO05D005916 1.3e-133 480.7 436 58.3
MD04G1100800 Malus domestica HOM05D000187 ORTHO05D005916 2.0e-131 473.4 431 57.3
MD12G1120500 Malus domestica HOM05D000187 ORTHO05D005916 1.4e-129 467.2 431 56.6
Glyma.19G180000 Glycine max HOM05D000187 ORTHO05D005916 4.2e-129 465.7 435 56.8
RcHm_v2.0_Chr3g0469341 Rosa chinensis HOM05D000187 ORTHO05D005916 7.9e-128 461.5 432 56.5
Lj2A110G55 Lonicera japonica HOM05D000187 ORTHO05D005916 4.8e-125 452.2 423 59.8
TAR636G0951 Trochodendron aralioides HOM05D000187 ORTHO05D005916 6.3e-125 451.8 435 55.9
COL.COLO4_27046 Corchorus olitorius HOM05D000187 ORTHO05D005916 9.1e-124 448.0 384 60.7
Haze_20619 Corylus avellana HOM05D000187 ORTHO05D005916 1.1e-121 441.0 390 60.3
Duzib106G1386 Durio zibethinus HOM05D000187 ORTHO05D005916 9.4e-121 438.0 431 54.3
Glyma.10G051200 Glycine max HOM05D000187 ORTHO05D005916 2.1e-120 436.8 433 52.4
Glyma.13G138700 Glycine max HOM05D000187 ORTHO05D005916 1.4e-119 434.1 434 53.2
FAN05G1888 Fragaria x ananassa HOM05D000187 ORTHO05D005916 7.4e-118 428.3 432 54.4
FvH4_6g15650 Fragaria vesca HOM05D000187 ORTHO05D005916 9.7e-118 427.9 432 54.2
FAN14G0677 Fragaria x ananassa HOM05D000187 ORTHO05D005916 1.3e-117 427.6 432 54.2
Phvul.001G176000 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 1.3e-117 427.6 435 52.4
VMungo1383G3362 Vigna mungo HOM05D000190 ORTHO05D005916 2.2e-117 426.8 437 51.0
Nitab4.5_0000669g0040 Nicotiana tabacum HOM05D000187 ORTHO05D005916 8.2e-117 424.9 433 55.0
VMungo0720G2148 Vigna mungo HOM05D000187 ORTHO05D005916 8.2e-117 424.9 445 50.8
FAN02G4435 Fragaria x ananassa HOM05D000187 ORTHO05D005916 5.3e-116 422.2 432 53.9
Lj1g0027469 Lotus japonicus HOM05D000187 ORTHO05D005916 9.1e-116 421.4 434 51.8
Phvul.007G221700 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 1.2e-115 421.0 443 51.5
PGSC0003DMG400001775 Solanum tuberosum HOM05D000187 ORTHO05D005916 4.5e-115 419.1 431 55.0
Ca_08834_v3 Cicer arietinum L. HOM05D000187 ORTHO05D005916 7.7e-115 418.3 441 51.9
Glyma.03G179300 Glycine max HOM05D000187 ORTHO05D005916 7.7e-115 418.3 439 53.3
TAR633G0001 Trochodendron aralioides HOM05D000187 ORTHO05D005916 6.5e-114 415.2 435 53.6
Hund20201 Selenicereus undatus HOM05D000187 ORTHO05D005916 1.1e-113 414.5 439 52.2
Manes.08G004116 Manihot esculenta HOM05D000187 ORTHO05D005916 1.9e-113 413.7 381 58.0
Manes.08G004122 Manihot esculenta HOM05D000187 ORTHO05D005916 1.9e-113 413.7 381 58.0
EL10Ac7g16533 Beta vulgaris HOM05D000187 ORTHO05D005916 7.2e-113 411.8 441 50.3
Nitab4.5_0008126g0010 Nicotiana tabacum HOM05D000187 ORTHO05D005916 3.6e-112 409.5 420 54.3
Sopen09g002400 Solanum pennellii HOM05D000187 ORTHO05D005916 6.1e-112 408.7 431 53.8
Manes.08G004128 Manihot esculenta HOM05D000187 ORTHO05D005916 8.0e-112 408.3 381 57.5
AUR62040492 Chenopodium quinoa HOM05D000187 ORTHO05D005916 1.4e-111 407.5 439 51.3
Manes.08G004106 Manihot esculenta HOM05D000187 ORTHO05D005916 1.4e-111 407.5 381 57.5
Manes.08G004121 Manihot esculenta HOM05D000187 ORTHO05D005916 1.4e-111 407.5 381 57.5
Solyc09g007530.3 Solanum lycopersicum HOM05D000187 ORTHO05D005916 8.8e-111 404.8 431 53.1
Actinidia05261 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.2e-110 404.4 420 54.5
Peaxi162Scf00343g00019 Petunia axillaris HOM05D000187 ORTHO05D005916 1.2e-110 404.4 423 54.6
AUR62042546 Chenopodium quinoa HOM05D000187 ORTHO05D005916 5.7e-110 402.1 439 50.8
MSTRG.5732 Avicennia marina HOM05D000187 ORTHO05D005916 1.1e-108 397.9 430 53.5
vmacro08722 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 1.4e-108 397.5 412 57.8
PGR142G2245 Punica granatum HOM05D000187 ORTHO05D005916 3.1e-108 396.4 435 51.3
Lalb_Chr20g0112811 Lupinus albus HOM05D000187 ORTHO05D005916 3.5e-107 392.9 413 52.5
MSTRG.19149 Avicennia marina HOM05D000187 ORTHO05D005916 3.8e-106 389.4 429 51.5
TWI53G0724 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 3.8e-106 389.4 434 49.8
Oeu060098.1 Olea europaea HOM05D000187 ORTHO05D005916 2.3e-103 380.2 398 53.3
Lalb_Chr01g0018951 Lupinus albus HOM05D000187 ORTHO05D005916 6.8e-103 378.6 438 51.4
Cpa.g.sc45.53 Carica papaya HOM05D000187 ORTHO05D005916 2.0e-102 377.1 383 52.7
Medtr7g100950 Medicago truncatula HOM05D000187 ORTHO05D005916 3.4e-102 376.3 442 48.9
Psat3g044680 Pisum sativum HOM05D000187 ORTHO05D005916 6.3e-101 372.1 451 47.7
Nn2g13049 Nelumbo nucifera HOM05D000187 ORTHO05D005916 8.6e-98 361.7 436 48.4
TPR.G18272 Trifolium pratense HOM05D000187 ORTHO05D005916 5.5e-97 359.0 431 48.0
THA.LOC104806500 Tarenaya hassleriana HOM05D000187 ORTHO05D005916 4.0e-95 352.8 433 46.2
Migut.L01674 Erythranthe guttata HOM05D000187 ORTHO05D005916 9.8e-94 348.2 430 47.7
Medtr1g066400 Medicago truncatula HOM05D000187 ORTHO05D005916 2.7e-91 340.1 424 46.2
Oeu001343.2 Olea europaea HOM05D000187 ORTHO05D005916 2.3e-87 327.0 411 48.2
Migut.J00432 Erythranthe guttata HOM05D000187 ORTHO05D005916 1.2e-86 324.7 431 45.9
Sc20g0005150 Simmondsia chinensis HOM05D000187 ORTHO05D005916 1.2e-86 324.7 430 45.1
SalBow3G2812 Salvia bowleyana HOM05D000187 ORTHO05D005916 8.3e-85 318.5 413 46.0
Manes.08G004902 Manihot esculenta HOM05D000187 ORTHO05D005916 2.4e-84 317.0 427 45.0
SGA_v2.0_scaffold126G33919 Striga asiatica HOM05D000187 ORTHO05D005916 8.3e-77 292.0 442 45.7
Nn2g10740 Nelumbo nucifera HOM05D000187 ORTHO05D005916 1.7e-74 284.3 354 47.7
Sc02g0001880 Simmondsia chinensis HOM05D000187 ORTHO05D005916 7.3e-73 278.9 348 47.7
Eucgr.K03219 Eucalyptus grandis HOM05D000187 ORTHO05D005916 3.6e-72 276.6 444 43.0
DCAR_014978 Daucus carota HOM05D000187 ORTHO05D005916 1.3e-69 268.1 425 39.8
CARHR131660 Cardamine hirsuta HOM05D000187 ORTHO05D005916 2.2e-69 267.3 435 39.8
PSO339G0454 Papaver somniferum HOM05D000187 ORTHO05D005916 2.2e-69 267.3 441 41.3
PSO384G1161 Papaver somniferum HOM05D000187 ORTHO05D005916 1.9e-68 264.2 443 41.8
AL4G33500 Arabidopsis lyrata HOM05D000187 ORTHO05D005916 3.2e-68 263.5 436 39.7
GSVIVG01016299001 Vitis vinifera HOM05D000187 ORTHO05D005916 2.1e-67 260.8 438 40.6
CiPaw.01G274200 Carya illinoinensis HOM05D000187 ORTHO05D005916 1.5e-65 254.6 431 40.4
Thhalv10016485m.g Eutrema salsugineum HOM05D000187 ORTHO05D005916 1.5e-65 254.6 435 40.0
Dinv11787 Davidia involucrata HOM05D000187 ORTHO05D005916 1.9e-65 254.2 435 40.7
Lsat_1_v5_gn_6_30401 Lactuca sativa HOM05D000187 ORTHO05D005916 8.1e-64 248.8 460 42.6
PSO063G1315 Papaver somniferum HOM05D000187 ORTHO05D005916 1.4e-63 248.1 450 38.2
ECA248G0617 Erigeron canadensis HOM05D000187 ORTHO05D005916 2.0e-62 244.2 421 41.6
Potri.010G220700 Populus trichocarpa HOM05D000187 ORTHO05D005916 2.6e-62 243.8 442 38.5
Aqoxy4G03246 Aquilegia oxysepala HOM05D000187 ORTHO05D005916 4.4e-62 243.0 442 38.7
C04p65710 Brassica napus HOM05D000187 ORTHO05D005916 4.4e-62 243.0 436 38.5
Sp4g19460 Schrenkiella parvula HOM05D000187 ORTHO05D005916 5.8e-62 242.7 433 38.1
Dinv31334 Davidia involucrata HOM05D000187 ORTHO05D005916 9.9e-62 241.9 435 39.8
QL08p056329 Quercus lobata HOM05D000187 ORTHO05D005916 1.7e-61 241.1 437 39.1
BraA04t18318Z Brassica rapa HOM05D000187 ORTHO05D005916 2.2e-61 240.7 434 38.7
CSS0009934 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 1.1e-60 238.4 437 37.3
Carub.0004s1904 Capsella rubella HOM05D000187 ORTHO05D005916 1.1e-60 238.4 436 37.2
Aa31LG5G22440 Aethionema arabicum HOM05D000187 ORTHO05D005916 7.1e-60 235.7 438 37.2
PSO339G2442 Papaver somniferum HOM05D000187 ORTHO05D005916 7.1e-60 235.7 450 37.3
AT2G37150 Arabidopsis thaliana HOM05D000187 ORTHO05D005916 1.6e-59 234.6 438 37.7
BolC3t14799H Brassica oleracea HOM05D000187 ORTHO05D005916 1.6e-59 234.6 425 38.1
Manes.05G197201 Manihot esculenta HOM05D000187 ORTHO05D005916 6.0e-59 232.6 242 52.9
BcaC02g07546 Brassica carinata HOM05D000187 ORTHO05D005916 8.7e-58 228.8 434 37.8
C03p24070 Brassica napus HOM05D000187 ORTHO05D005916 8.7e-58 228.8 425 37.4
BolC4t28072H Brassica oleracea HOM05D000187 ORTHO05D005916 8.7e-58 228.8 434 37.8
ECA233G1295 Erigeron canadensis HOM05D000187 ORTHO05D005916 1.5e-57 228.0 431 41.1
BraA03t11290Z Brassica rapa HOM05D000187 ORTHO05D005916 2.5e-57 227.3 426 37.8
Ah.08g211860 Amaranthus hybridus HOM05D000187 ORTHO05D005916 3.3e-57 226.9 483 34.6
A03p20470 Brassica napus HOM05D000187 ORTHO05D005916 3.3e-57 226.9 425 37.2
vmacro07079 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 4.3e-57 226.5 437 39.4
Sabra10G0170500 Salix brachista HOM05D000187 ORTHO05D005916 8.1e-56 222.2 436 39.2
Sabra08G0028000 Salix brachista HOM05D000187 ORTHO05D005916 1.2e-54 218.4 431 36.2
CSS0024672 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 1.5e-54 218.0 437 36.2
Rhsim03G0124300 Rhododendron simsii HOM05D000187 ORTHO05D005916 2.6e-54 217.2 436 37.2
Lj1A918T46 Lonicera japonica HOM05D000187 ORTHO05D005916 2.4e-52 210.7 418 36.8
A04p28400 Brassica napus HOM05D000187 ORTHO05D005916 5.1e-50 203.0 392 38.3
BcaB06g28980 Brassica carinata HOM05D000187 ORTHO05D005916 5.6e-49 199.5 429 37.3
HanXRQChr11g0349931 Helianthus annuus HOM05D000187 ORTHO05D005916 1.3e-48 198.4 434 37.6
CSS0010500 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 2.1e-48 197.6 423 36.6
BcaC01g06650 Brassica carinata HOM05D000187 ORTHO05D005916 1.3e-40 171.8 402 33.3
HanXRQChr13g0399681 Helianthus annuus HOM05D000187 ORTHO05D005916 2.1e-40 171.0 434 35.5
HanXRQChr02g0052101 Helianthus annuus HOM05D000187 ORTHO05D005916 2.8e-40 170.6 432 35.6
Actinidia03050 Actinidia chinensis HOM05D000187 ORTHO05D005916 2.4e-39 167.5 448 33.0
Actinidia38267 Actinidia chinensis HOM05D000187 ORTHO05D005916 6.9e-39 166.0 454 31.9
Thecc.10G071200 Theobroma cacao HOM05D000187 ORTHO05D005916 1.7e-37 161.4 437 33.4
SGA_v2.0_scaffold35G14150 Striga asiatica HOM05D000187 ORTHO05D005916 4.2e-36 156.8 405 33.6
Potri.008G041201 Populus trichocarpa HOM05D000187 ORTHO05D005916 4.3e-33 146.7 421 32.8
TWI63G0123 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 5.7e-33 146.4 437 30.7
TWI38G1582 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 2.1e-32 144.4 437 30.7
Cpa.g.sc53.60 Carica papaya HOM05D000187 ORTHO05D005916 8.2e-32 142.5 411 32.1
DCAR_006455 Daucus carota HOM05D000187 ORTHO05D005916 6.9e-31 139.4 435 33.3
Atru.chr12.730 Acer truncatum HOM05D000187 ORTHO05D005916 6.7e-26 122.9 447 28.6
COL.COLO4_23706 Corchorus olitorius HOM05D000187 ORTHO05D005916 7.4e-25 119.4 325 35.7
ECA238G1542 Erigeron canadensis HOM05D000187 ORTHO05D005916 4.8e-16 90.1 431 28.5
Lsat_1_v5_gn_2_113620 Lactuca sativa HOM05D000187 ORTHO05D005916 4.1e-15 87.0 448 28.6


User provided reference genes

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