Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 9.4e-251 869.8 454 100.0
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 3.0e-124 449.5 424 64.6
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 2.3e-108 396.7 457 55.8
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 8.3e-106 388.3 504 50.0
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 9.5e-102 374.8 507 51.1
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.4e-97 360.1 493 49.1
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.7e-96 356.7 491 48.5
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 4.4e-91 339.3 504 46.4
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 5.8e-91 339.0 503 46.1
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.9e-90 336.7 504 45.4
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.9e-89 334.0 475 50.1
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 1.6e-88 330.9 479 49.3
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 5.6e-86 322.4 475 48.0
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 3.7e-82 309.7 468 46.4
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 8.3e-82 308.5 462 47.6
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.1e-81 308.1 437 50.8
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.4e-81 307.8 465 46.7
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 7.1e-81 305.4 460 47.6
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 9.2e-81 305.1 420 52.1
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.1e-80 303.9 466 47.4
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.7e-80 303.5 464 45.7
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 5.1e-79 299.3 459 46.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 8.1e-77 292.0 464 48.5
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.8e-76 290.8 547 43.1
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 1.8e-76 290.8 416 48.3
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 2.6e-75 287.0 455 45.1
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 2.4e-73 280.4 461 45.6
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 1.2e-72 278.1 457 45.5
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 6.0e-72 275.8 457 45.3
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 7.3e-70 268.9 414 47.6
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 2.8e-69 266.9 501 41.7
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 4.0e-68 263.1 457 44.2
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.7e-66 257.7 457 44.4
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 4.2e-65 253.1 459 42.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 7.1e-65 252.3 459 42.5
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.1e-64 250.8 463 43.4
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 2.1e-64 250.8 459 42.3
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.6e-64 249.6 477 43.2
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 8.7e-63 245.4 296 53.0
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.1e-62 245.0 276 52.9
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.6e-61 241.1 460 40.4
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 8.1e-61 238.8 455 42.2
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-60 237.7 465 42.6
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 2.6e-59 233.8 429 44.5
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 8.4e-58 228.8 453 41.9
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.1e-57 228.4 404 43.8
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-57 228.4 253 56.5
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.2e-56 224.9 465 41.5
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 1.2e-56 224.9 459 40.1
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 2.1e-56 224.2 400 44.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 4.6e-56 223.0 415 40.7
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.6e-56 223.0 465 41.3
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-55 220.3 411 43.3
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 3.7e-53 213.4 456 40.6
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.7e-53 213.4 420 41.2
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-51 208.0 455 39.8
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-50 203.8 406 42.9
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 6.4e-50 202.6 458 38.4
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 9.3e-49 198.7 412 41.3
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 3.5e-48 196.8 327 43.4
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 7.9e-48 195.7 457 36.8
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-47 194.1 413 41.4
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 3.0e-47 193.7 458 37.8
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 6.7e-47 192.6 462 37.9
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 6.7e-47 192.6 408 40.2
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 8.7e-47 192.2 323 47.1
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-46 191.0 402 41.0
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-45 188.0 434 39.4
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 2.1e-45 187.6 410 40.2
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 4.8e-45 186.4 454 37.0
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 6.9e-44 182.6 427 40.0
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 2.0e-43 181.0 227 50.2
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 2.2e-42 177.6 312 44.6
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 2.2e-42 177.6 254 46.9
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 2.9e-42 177.2 349 40.7
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 5.5e-41 172.9 462 38.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 6.0e-40 169.5 462 36.4
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 6.7e-39 166.0 463 37.4
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 1.5e-38 164.9 461 35.4
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 2.5e-38 164.1 458 36.9
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 9.7e-38 162.2 241 48.1
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.3e-37 161.8 466 34.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 8.2e-37 159.1 465 36.1
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.4e-33 148.3 458 34.9
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 1.4e-33 148.3 461 33.8
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 1.9e-33 147.9 465 35.5
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 3.2e-33 147.1 242 44.2
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 1.2e-32 145.2 313 38.0
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 7.4e-30 136.0 303 40.3
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 9.1e-28 129.0 85 77.6
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.5e-25 120.9 409 35.5
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 2.1e-24 117.9 295 35.6
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 3.6e-24 117.1 134 56.7
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.6e-16 90.5 230 35.2
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.0e-14 84.7 100 45.0
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 5.3e-12 76.6 66 63.6
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.6e-11 75.1 55 70.9
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.6e-11 75.1 55 70.9
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.6e-11 75.1 55 70.9
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 1.3e-10 72.0 255 30.6
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 1.5e-09 68.6 304 28.9
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 1.5e-09 68.6 105 45.7
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 3.2e-09 67.4 106 45.3
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 9.4e-09 65.9 53 66.0
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 6.8e-07 59.7 118 42.4
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 6.8e-07 59.7 311 28.0
Rhsim02G0213400 Rhododendron simsii HOM05D005497 ORTHO05D006733 1.2e-06 58.9 237 29.1
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 1.2e-06 58.9 142 32.4
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 1.5e-06 58.5 232 26.7
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 2.0e-06 58.2 264 25.4
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 3.4e-06 57.4 264 25.4
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 3.4e-06 57.4 265 26.4
Pp3c12_23920 Physcomitrium patens HOM05D018912 ORTHO05D021275 4.4e-06 57.0 242 28.1


User provided reference genes

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