Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.2e-112 409.8 206 100.0
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.6e-72 275.0 204 71.1
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.8e-69 265.8 213 71.8
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 2.0e-67 259.6 205 66.8
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.5e-65 252.7 207 67.1
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 3.2e-65 252.3 211 68.2
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.4e-60 236.9 211 63.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.2e-56 223.8 209 64.6
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 2.3e-55 219.5 213 62.9
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 2.6e-54 216.1 212 60.4
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 7.7e-51 204.5 213 55.9
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 8.5e-50 201.1 206 57.8
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 7.2e-49 198.0 209 56.9
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.0e-47 194.1 205 54.1
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 2.0e-46 189.9 214 53.7
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.0e-46 189.9 217 54.8
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 2.6e-46 189.5 214 56.5
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 9.7e-46 187.6 208 59.1
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.7e-45 186.8 215 53.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.8e-45 186.0 213 55.9
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.8e-45 186.0 207 55.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 8.2e-45 184.5 219 54.8
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.1e-44 184.1 206 54.9
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.4e-44 183.7 217 53.9
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 7.0e-44 181.4 216 54.6
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 3.5e-43 179.1 217 53.9
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.3e-42 177.2 218 54.6
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.9e-42 176.0 242 50.8
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 6.5e-42 174.9 223 53.8
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 8.5e-42 174.5 244 50.8
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 4.2e-41 172.2 209 53.6
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 5.5e-41 171.8 218 53.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.2e-40 170.6 209 52.2
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 2.1e-40 169.9 210 52.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 3.6e-40 169.1 210 50.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.6e-40 169.1 210 51.4
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 6.1e-40 168.3 215 51.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 8.0e-40 167.9 210 52.4
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 8.0e-40 167.9 210 52.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-39 167.5 208 51.9
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.8e-39 166.8 216 49.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.8e-39 166.8 223 52.9
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.3e-39 166.4 222 53.2
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 5.2e-39 165.2 228 52.2
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.2e-38 164.1 210 51.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 2.0e-38 163.3 211 50.7
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 2.6e-38 162.9 213 51.6
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.4e-38 162.5 210 51.4
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.3e-37 160.6 208 51.0
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 2.4e-36 156.4 203 49.8
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.1e-36 156.0 210 49.5
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.1e-36 156.0 210 49.5
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.4e-36 155.2 240 48.3
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.4e-36 155.2 210 49.0
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 7.0e-36 154.8 212 50.0
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.2e-35 154.1 213 49.3
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.7e-35 152.9 244 46.7
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.7e-35 152.9 211 50.2
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 7.7e-35 151.4 218 52.8
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 8.6e-34 147.9 216 50.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.1e-33 147.5 224 45.5
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.1e-33 147.5 227 46.7
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 4.2e-33 145.6 224 45.1
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 5.5e-33 145.2 210 46.7
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 9.5e-33 144.4 205 47.3
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.2e-32 144.1 213 46.5
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 3.6e-32 142.5 207 46.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 6.1e-32 141.7 212 46.2
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 8.0e-32 141.4 206 46.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 8.0e-32 141.4 213 46.0
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.4e-31 140.6 211 48.8
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.8e-31 140.2 206 49.0
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 3.0e-31 139.4 207 44.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.0e-30 136.7 220 45.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.4e-30 136.0 218 44.5
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 4.4e-30 135.6 215 47.0
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 7.5e-30 134.8 206 48.1
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.2e-29 133.3 206 46.6
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 4.9e-29 132.1 234 44.9
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 8.3e-29 131.3 211 49.3
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.0e-27 126.7 209 46.4
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 2.9e-26 122.9 263 36.5
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 2.9e-26 122.9 210 48.1
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 5.0e-26 122.1 210 43.8
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 6.6e-26 121.7 209 47.8
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.1e-25 120.9 171 47.4
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 7.3e-25 118.2 255 38.8
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.2e-24 117.5 126 50.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.6e-24 117.1 207 40.6
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 4.7e-24 115.5 188 42.6
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.8e-23 113.6 204 40.7
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.8e-23 113.6 265 38.1
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 2.3e-23 113.2 214 43.0
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 7.5e-22 108.2 305 32.5
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.9e-21 106.3 201 38.3
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.1e-20 102.4 192 43.8
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.7e-19 99.8 206 40.3
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 7.8e-19 98.2 90 62.2
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.1e-17 94.4 193 40.9
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.4e-15 87.4 107 56.1
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 4.0e-15 85.9 107 55.1
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 4.0e-15 85.9 107 55.1
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 8.9e-15 84.7 107 56.1
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.2e-14 84.3 50 80.0
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 4.6e-11 72.4 113 43.4
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 5.0e-10 68.9 105 45.7
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 7.3e-09 65.1 114 38.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.8e-07 60.5 199 30.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 2.0e-06 57.0 204 32.8


User provided reference genes

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