Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.0e-90 336.7 161 100.0
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 4.5e-46 188.3 162 63.0
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 7.6e-46 187.6 164 63.4
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 5.5e-44 181.4 161 62.7
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.7e-43 179.1 139 61.2
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 4.6e-43 178.3 162 57.4
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 7.9e-43 177.6 128 64.8
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.7e-42 174.5 166 54.8
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 6.7e-42 174.5 156 58.3
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.1e-41 173.7 163 59.5
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.1e-41 173.7 162 59.3
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.5e-41 173.3 165 56.4
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 4.3e-41 171.8 147 59.2
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.6e-41 171.4 139 62.6
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 9.6e-41 170.6 86 88.4
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.3e-40 170.2 163 59.5
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.6e-40 169.9 89 86.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 1.6e-40 169.9 162 56.8
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.8e-40 168.3 144 56.9
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.2e-40 167.9 139 61.9
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 6.2e-40 167.9 89 84.3
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 6.2e-40 167.9 138 63.0
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.4e-39 166.8 159 56.6
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.4e-39 166.0 139 61.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 4.0e-39 165.2 155 56.8
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 5.3e-39 164.9 84 84.5
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 5.3e-39 164.9 172 56.4
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 9.0e-39 164.1 106 70.8
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.2e-38 163.7 133 62.4
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.2e-38 163.7 125 60.8
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.0e-38 162.9 153 57.5
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 2.0e-38 162.9 157 54.8
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 2.0e-38 162.9 161 55.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.6e-38 162.5 129 59.7
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 2.6e-38 162.5 160 56.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 3.4e-38 162.2 150 63.3
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.8e-38 161.4 164 55.5
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 5.8e-38 161.4 147 58.5
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 7.6e-38 161.0 157 54.8
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 7.6e-38 161.0 85 85.9
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.3e-37 160.2 147 61.2
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.3e-37 160.2 135 59.3
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.3e-37 160.2 79 89.9
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.2e-37 159.5 155 56.1
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.2e-37 159.5 158 53.2
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 2.9e-37 159.1 83 85.5
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 2.9e-37 159.1 142 55.6
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 4.9e-37 158.3 98 72.4
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.1e-36 157.1 86 81.4
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.4e-36 156.8 148 53.4
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.4e-36 156.8 157 53.5
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 4.2e-36 155.2 138 57.2
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 5.5e-36 154.8 156 55.1
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 7.1e-36 154.5 88 78.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.1e-36 154.5 110 70.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.2e-35 153.7 86 79.1
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.2e-35 153.7 85 77.6
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.6e-35 153.3 82 80.5
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.6e-35 153.3 73 90.4
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.1e-35 152.9 157 51.6
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 2.1e-35 152.9 164 51.2
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 2.7e-35 152.5 81 81.5
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 3.5e-35 152.1 82 79.3
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 6.0e-35 151.4 82 79.3
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.9e-35 151.0 147 50.3
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 7.9e-35 151.0 71 91.5
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.0e-34 150.6 73 86.3
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.3e-34 150.2 81 79.0
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 3.0e-34 149.1 160 50.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 3.9e-34 148.7 159 50.3
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 5.1e-34 148.3 109 63.3
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 3.3e-33 145.6 81 77.8
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 3.3e-33 145.6 88 71.6
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.2e-32 142.9 86 68.6
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 3.7e-32 142.1 127 55.1
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 4.8e-32 141.7 82 74.4
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 3.1e-31 139.0 81 71.6
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 9.0e-31 137.5 72 87.5
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.5e-30 136.7 71 85.9
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 3.4e-30 135.6 82 70.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.8e-29 132.1 67 86.6
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 6.5e-29 131.3 66 83.3
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 8.5e-29 131.0 66 87.9
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.9e-28 129.8 69 85.5
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 2.5e-28 129.4 93 67.7
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.5e-28 129.4 69 84.1
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.2e-28 129.0 158 50.6
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 2.1e-27 126.3 70 81.4
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 7.9e-27 124.4 165 50.3
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.8e-24 115.9 73 71.2
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.8e-23 113.2 72 62.5
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.5e-22 110.2 65 76.9
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.4e-18 97.1 80 61.2
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 6.7e-18 94.7 63 57.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 3.4e-14 82.4 96 49.0
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.1e-07 60.8 37 67.6
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 2.0e-06 56.6 91 40.7


User provided reference genes

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