Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35541 Davidia involucrata HOM05D001463 ORTHO05D001282 1.6e-74 282.7 150 100.0
Actinidia13817 Actinidia chinensis HOM05D001463 ORTHO05D001282 6.7e-36 154.5 151 62.3
Actinidia29166 Actinidia chinensis HOM05D001463 ORTHO05D001282 7.4e-27 124.4 142 57.7
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 1.2e-24 117.1 87 70.1
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 5.8e-24 114.8 90 70.0
Actinidia05333 Actinidia chinensis HOM05D001463 ORTHO05D001282 2.1e-21 106.3 147 51.0
Actinidia01131 Actinidia chinensis HOM05D001463 ORTHO05D001282 3.0e-20 102.4 133 52.6
Rhsim04G0163100 Rhododendron simsii HOM05D001463 ORTHO05D001282 8.7e-20 100.9 173 42.8
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.5e-19 100.1 85 63.5
CSS0026065 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 4.8e-18 95.1 81 64.2
vmacro20196 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 4.1e-17 92.0 219 38.4
Haze_20884 Corylus avellana HOM05D001463 ORTHO05D001282 7.6e-16 87.8 154 47.4
Duzib106G1514 Durio zibethinus HOM05D001463 ORTHO05D001282 6.5e-15 84.7 71 70.4
Manes.08G082200 Manihot esculenta HOM05D001463 ORTHO05D001282 8.5e-15 84.3 104 51.9
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 1.4e-14 83.6 89 53.9
Haze_20893 Corylus avellana HOM05D001463 ORTHO05D001282 1.9e-14 83.2 176 40.9
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 5.5e-14 81.6 80 61.2
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 2.1e-13 79.7 90 57.8
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 2.1e-13 79.7 87 59.8
Duzib093G1451 Durio zibethinus HOM05D001463 ORTHO05D001282 6.1e-13 78.2 73 67.1
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 7.9e-13 77.8 107 53.3
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 1.0e-12 77.4 105 53.3
Ciclev10013013m.g Citrus clementina HOM05D001463 ORTHO05D001282 2.3e-12 76.3 73 61.6
Atru.chr8.2091 Acer truncatum HOM05D001463 ORTHO05D001282 3.9e-12 75.5 82 53.7
CsaV3_4G025610 Cucumis sativus L. HOM05D001463 ORTHO05D001282 8.8e-12 74.3 75 57.3
Gohir.A09G160900 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.1e-11 73.9 73 65.8
MELO3C003186.2 Cucumis melo HOM05D001463 ORTHO05D001282 1.5e-11 73.6 88 50.0
Gorai.006G178100 Gossypium raimondii HOM05D001463 ORTHO05D001282 9.7e-11 70.9 73 64.4
Gohir.D09G156600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.3e-10 70.5 73 64.4
Oeu013160.1 Olea europaea HOM05D001463 ORTHO05D001282 1.3e-10 70.5 88 51.1
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.7e-10 70.1 88 52.3
ClCG04G007570 Citrullus lanatus HOM05D001463 ORTHO05D001282 2.2e-10 69.7 105 45.7
Cc06_g02060 Coffea canephora HOM05D001463 ORTHO05D001282 2.8e-10 69.3 83 55.4
Gorai.007G377300 Gossypium raimondii HOM05D001463 ORTHO05D001282 2.8e-10 69.3 88 54.5
Gohir.D11G346900 Gossypium hirsutum HOM05D001463 ORTHO05D001282 3.7e-10 68.9 88 54.5
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.1e-09 67.4 86 53.5
QL07p028303 Quercus lobata HOM05D001463 ORTHO05D001282 1.8e-09 66.6 88 48.9
Prupe.6G264600 Prunus persica HOM05D001463 ORTHO05D001282 3.1e-09 65.9 89 55.1
Gohir.A11G328000 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.9e-09 64.7 91 50.5
GSVIVG01024854001 Vitis vinifera HOM05D001463 ORTHO05D001282 6.9e-09 64.7 75 54.7
CANSAT35G0720 Cannabis sativa HOM05D001463 ORTHO05D001282 1.2e-08 63.9 79 54.4
Oeu030548.1 Olea europaea HOM05D001463 ORTHO05D001282 1.2e-08 63.9 65 63.1
Glyma.18G189900 Glycine max HOM05D001463 ORTHO05D001282 2.0e-08 63.2 69 59.4
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.6e-08 62.8 75 53.3
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 2.6e-08 62.8 89 50.6
Cpa.g.sc56.61 Carica papaya HOM05D001463 ORTHO05D001282 4.5e-08 62.0 81 53.1
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 4.5e-08 62.0 106 45.3
TWI53G1409 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 5.9e-08 61.6 89 47.2
TWI74G0174 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 5.9e-08 61.6 83 49.4
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 5.9e-08 61.6 94 46.8
TWI77G0582 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 7.7e-08 61.2 83 48.2
MSTRG.5625 Avicennia marina HOM05D001463 ORTHO05D001282 1.0e-07 60.8 70 57.1
DCAR_010425 Daucus carota HOM05D001463 ORTHO05D001282 1.0e-07 60.8 86 50.0
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.3e-07 60.5 74 54.1
Sed0005026 Sechium edule HOM05D001463 ORTHO05D001282 1.7e-07 60.1 104 43.3
HanXRQChr06g0177681 Helianthus annuus HOM05D001463 ORTHO05D001282 2.2e-07 59.7 64 54.7
Nn2g13529 Nelumbo nucifera HOM05D001463 ORTHO05D001282 2.2e-07 59.7 90 50.0
Dinv17065 Davidia involucrata HOM05D001463 ORTHO05D001282 2.9e-07 59.3 80 51.2
Dinv43009 Davidia involucrata HOM05D001463 ORTHO05D001282 2.9e-07 59.3 80 51.2
Dinv43088 Davidia involucrata HOM05D001463 ORTHO05D001282 2.9e-07 59.3 80 51.2
FvH4_3g37190 Fragaria vesca HOM05D001463 ORTHO05D001282 2.9e-07 59.3 106 44.3
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.9e-07 59.3 106 44.3
Medtr7g065150 Medicago truncatula HOM05D001463 ORTHO05D001282 2.9e-07 59.3 52 73.1
TPR.G34922 Trifolium pratense HOM05D001463 ORTHO05D001282 2.9e-07 59.3 83 51.8
Glyma.03G073400 Glycine max HOM05D001463 ORTHO05D001282 3.8e-07 58.9 70 57.1
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 3.8e-07 58.9 106 42.5
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 5.0e-07 58.5 84 50.0
FAN02G1653 Fragaria x ananassa HOM05D001463 ORTHO05D001282 5.0e-07 58.5 107 44.9
FAN09G2315 Fragaria x ananassa HOM05D001463 ORTHO05D001282 5.0e-07 58.5 178 35.4
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 5.0e-07 58.5 106 43.4
MD12G1154800 Malus domestica HOM05D001463 ORTHO05D001282 6.5e-07 58.2 63 68.3
Sed0014683 Sechium edule HOM05D001463 ORTHO05D001282 6.5e-07 58.2 84 51.2
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 8.5e-07 57.8 64 56.2
Ciclev10029407m.g Citrus clementina HOM05D001463 ORTHO05D001282 1.1e-06 57.4 85 41.2
FAN14G0695 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.1e-06 57.4 107 43.9
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.4e-06 57.0 106 43.4
Glyma.07G139300 Glycine max HOM05D001463 ORTHO05D001282 1.4e-06 57.0 69 53.6
Phvul.008G114000 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 1.4e-06 57.0 69 52.2
FvH4_6g12720 Fragaria vesca HOM05D001463 ORTHO05D001282 1.9e-06 56.6 107 43.9
Actinidia34435 Actinidia chinensis HOM05D001463 ORTHO05D001282 2.5e-06 56.2 152 34.9
Eucgr.K03042 Eucalyptus grandis HOM05D001463 ORTHO05D001282 2.5e-06 56.2 89 44.9
FAN11G0374 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.5e-06 56.2 174 35.1
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 2.5e-06 56.2 88 45.5
Lalb_Chr01g0022791 Lupinus albus HOM05D001463 ORTHO05D001282 3.2e-06 55.8 80 50.0
CiPaw.14G063800 Carya illinoinensis HOM05D001463 ORTHO05D001282 4.2e-06 55.5 105 43.8
Oeu053786.1 Olea europaea HOM05D001463 ORTHO05D001282 5.5e-06 55.1 104 40.4
Solyc09g011470.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 5.5e-06 55.1 82 50.0
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 7.2e-06 54.7 85 44.7
Glyma.18G082600 Glycine max HOM05D001463 ORTHO05D001282 7.2e-06 54.7 69 53.6
Gorai.009G095400 Gossypium raimondii HOM05D001463 ORTHO05D001282 7.2e-06 54.7 74 51.4
Sopen09g006220 Solanum pennellii HOM05D001463 ORTHO05D001282 7.2e-06 54.7 82 50.0
COL.COLO4_18603 Corchorus olitorius HOM05D001463 ORTHO05D001282 9.4e-06 54.3 56 60.7


User provided reference genes

Program Settings