Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 7.4e-253 876.7 436 100.0
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 1.7e-209 732.6 438 83.1
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 8.0e-207 723.8 432 82.4
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 5.2e-206 721.1 436 81.2
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 5.2e-206 721.1 430 82.8
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.1e-203 713.4 431 80.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.8e-203 712.6 430 80.9
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 2.4e-203 712.2 430 82.3
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 2.0e-202 709.1 430 78.8
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.0e-201 706.8 439 81.5
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 5.5e-200 701.0 430 79.8
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 7.2e-200 700.7 435 80.9
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.0e-198 695.3 430 79.5
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 4.0e-198 694.9 435 80.0
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.2e-196 689.1 431 77.0
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.9e-196 688.0 430 77.0
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 8.3e-196 687.2 428 75.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.1e-195 686.8 430 79.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 4.1e-195 684.9 430 79.1
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 5.4e-195 684.5 430 78.8
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 7.0e-195 684.1 430 77.7
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.2e-194 683.3 426 78.9
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 1.6e-194 682.9 430 76.7
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.5e-194 681.8 430 78.6
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 3.5e-194 681.8 433 77.4
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.7e-193 679.5 430 78.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 3.8e-193 678.3 431 79.1
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 6.6e-193 677.6 431 78.9
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.1e-192 676.8 430 78.1
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 5.6e-192 674.5 432 76.9
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 9.5e-192 673.7 430 77.0
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 2.3e-190 669.1 434 74.9
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 2.3e-190 669.1 433 76.7
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.0e-190 668.3 431 75.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.2e-189 666.8 431 77.7
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.9e-187 659.4 431 77.5
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 5.4e-187 657.9 430 75.6
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.2e-186 656.8 430 75.6
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.2e-186 656.8 440 75.9
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 3.5e-186 655.2 436 74.5
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 4.6e-186 654.8 434 74.4
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 1.1e-184 650.2 431 74.9
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.1e-184 650.2 408 80.4
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.5e-184 649.8 432 75.9
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 3.3e-184 648.7 432 74.3
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 5.6e-184 647.9 431 74.9
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.2e-183 646.7 436 75.0
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.6e-183 646.4 426 73.9
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 8.0e-183 644.0 432 75.9
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.3e-182 642.5 437 73.0
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 6.8e-182 641.0 432 74.3
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 6.8e-182 641.0 430 73.0
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.0e-181 639.4 441 72.1
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.6e-181 639.0 435 73.1
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 3.4e-181 638.6 435 72.9
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 2.7e-178 629.0 438 73.1
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 5.1e-177 624.8 456 70.8
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.1e-177 624.8 443 70.9
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 6.6e-177 624.4 431 70.1
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.9e-176 622.9 448 69.0
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.2e-175 620.2 430 76.0
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 2.8e-175 619.0 433 71.1
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.8e-174 616.3 431 70.1
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 8.9e-174 614.0 432 70.4
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.6e-170 601.7 412 75.5
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 5.1e-169 598.2 432 69.4
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 8.1e-167 590.9 354 82.5
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 5.8e-165 584.7 432 69.7
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.9e-163 579.7 430 66.7
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.0e-161 572.4 443 70.4
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 8.7e-161 570.9 386 75.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 7.3e-160 567.8 462 63.4
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.6e-159 566.6 430 71.2
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 6.2e-159 564.7 399 70.7
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 8.1e-159 564.3 433 63.5
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 8.1e-159 564.3 410 71.5
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 2.4e-158 562.8 440 65.7
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.4e-157 558.9 431 63.6
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 5.8e-157 558.1 430 64.7
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 2.9e-156 555.8 431 62.4
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.4e-155 553.5 431 64.7
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.9e-155 553.1 431 62.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.4e-155 552.7 332 81.0
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 4.6e-154 548.5 431 62.6
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 5.1e-153 545.0 430 61.9
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 5.1e-153 545.0 416 62.7
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 5.6e-152 541.6 431 62.2
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 7.3e-152 541.2 431 62.4
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 6.2e-151 538.1 417 62.8
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 9.0e-150 534.3 441 60.8
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.9e-148 529.3 431 60.3
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.6e-146 523.5 418 64.1
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 6.0e-146 521.5 420 63.8
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.7e-145 518.1 428 61.9
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 4.8e-143 511.9 432 60.4
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 3.4e-141 505.8 419 61.3
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 4.5e-141 505.4 408 64.0
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 2.5e-139 499.6 400 61.2
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 5.1e-137 491.9 408 61.8
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.0e-129 467.6 329 71.7
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 1.1e-120 437.6 264 81.1
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 1.8e-113 413.7 307 69.4
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.3e-112 409.5 431 52.4
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.5e-101 372.9 401 52.6
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 7.7e-101 371.7 401 49.1
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 3.8e-92 342.8 217 72.8
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.2e-87 327.0 427 44.3
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.1e-83 314.7 323 53.3
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.5e-80 304.3 424 42.9
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 4.4e-80 302.8 308 52.9
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.7e-79 299.7 216 67.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.0e-61 239.2 168 66.1
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 6.6e-60 235.7 156 71.8
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 4.0e-57 226.5 137 74.5
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 3.4e-56 223.4 130 80.0
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.2e-48 198.4 223 47.5
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.6e-48 195.7 131 69.5
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-46 191.0 131 67.9
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 1.7e-36 157.9 101 73.3
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.8e-33 147.9 82 87.8
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 9.0e-33 145.6 132 59.1
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 4.3e-27 126.7 92 75.0
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 5.6e-27 126.3 109 61.5
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 3.9e-20 103.6 101 54.5
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 1.2e-13 82.0 52 63.5
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.4e-09 68.6 52 55.8
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 1.7e-07 61.6 52 63.5


User provided reference genes

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