Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 2.2e-61 238.8 124 100.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 3.8e-53 211.5 124 87.9
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 1.1e-52 209.9 124 81.5
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 4.2e-52 208.0 124 85.5
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 1.6e-51 206.1 124 85.5
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.1e-51 205.7 124 83.9
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.0e-50 203.4 123 82.1
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 3.9e-50 201.4 123 80.5
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 8.7e-50 200.3 124 78.2
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.5e-49 199.5 120 83.3
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.9e-49 199.1 124 83.1
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.5e-49 198.7 124 78.2
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 2.5e-49 198.7 124 79.0
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 3.3e-49 198.4 124 79.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 3.3e-49 198.4 124 81.5
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 4.3e-49 198.0 124 81.5
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.3e-49 198.0 124 77.4
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 7.4e-49 197.2 124 80.6
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 1.3e-48 196.4 124 78.2
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.6e-48 196.1 124 81.5
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 1.6e-48 196.1 124 79.0
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.2e-48 195.7 124 80.6
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 3.7e-48 194.9 120 80.0
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 6.3e-48 194.1 124 78.2
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 3.1e-47 191.8 124 78.2
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 4.1e-47 191.4 121 78.5
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 5.3e-47 191.0 126 77.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 5.3e-47 191.0 126 77.8
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.0e-46 189.1 126 77.0
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.4e-46 188.3 124 78.2
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.9e-46 187.6 121 76.9
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 1.0e-45 186.8 119 76.5
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.0e-45 186.8 119 76.5
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 1.0e-45 186.8 122 76.2
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 1.3e-45 186.4 121 76.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.7e-45 186.0 119 74.8
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 2.2e-45 185.7 119 74.8
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.9e-45 185.3 122 76.2
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 3.8e-45 184.9 155 63.9
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 8.5e-45 183.7 120 77.5
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 8.5e-45 183.7 118 78.8
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.1e-44 183.3 124 75.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.9e-44 182.6 119 73.9
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.9e-44 182.6 118 77.1
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 1.9e-44 182.6 124 72.6
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.9e-44 182.6 123 74.0
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 2.5e-44 182.2 119 73.1
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 3.2e-44 181.8 121 75.2
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 7.2e-44 180.6 124 72.6
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 9.4e-44 180.3 119 72.3
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 9.4e-44 180.3 119 72.3
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 9.4e-44 180.3 119 72.3
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 9.4e-44 180.3 118 78.8
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.6e-43 179.5 118 75.4
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 2.1e-43 179.1 119 71.4
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 2.1e-43 179.1 118 78.8
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.7e-43 178.7 124 71.0
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.7e-43 178.7 122 71.3
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 6.1e-43 177.6 120 72.5
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 7.9e-43 177.2 120 69.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 7.9e-43 177.2 122 73.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.4e-42 176.4 119 70.6
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 1.8e-42 176.0 118 70.3
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.3e-42 175.6 116 71.6
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 3.0e-42 175.3 120 69.2
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 3.9e-42 174.9 121 73.6
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.9e-42 174.9 124 67.7
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.9e-42 174.9 122 69.7
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.8e-42 173.7 124 67.7
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 1.5e-41 172.9 123 69.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.0e-41 172.6 123 68.3
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 2.5e-41 172.2 122 71.3
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 3.3e-41 171.8 123 67.5
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 5.7e-41 171.0 122 70.5
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 9.7e-41 170.2 122 69.7
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 9.7e-41 170.2 122 69.7
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 1.3e-40 169.9 120 68.3
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 2.8e-40 168.7 117 69.2
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 2.8e-40 168.7 121 65.3
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.8e-40 168.7 121 65.3
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 8.2e-40 167.2 121 66.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 124 62.9
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 2.4e-39 165.6 140 60.7
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 3.4e-38 161.8 120 68.3
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 5.9e-38 161.0 122 68.9
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 3.2e-36 155.2 101 72.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.2e-36 154.8 102 70.6
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 9.4e-36 153.7 90 86.7
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 6.1e-35 151.0 89 86.5
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 1.4e-34 149.8 174 48.3
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.8e-34 149.4 121 57.9
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.9e-34 148.3 106 67.0
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.1e-34 147.9 112 60.7
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.3e-32 143.3 115 60.9
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 2.2e-32 142.5 93 79.6
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.8e-31 139.4 85 75.3
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.2e-30 136.7 87 79.3
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.5e-30 135.2 89 77.5
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.5e-30 134.8 86 80.2
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 4.5e-30 134.8 90 73.3
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.2e-29 132.5 100 64.0
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 3.8e-29 131.7 95 73.7
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 9.4e-28 127.1 87 69.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 4.0e-26 121.7 124 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.0e-25 119.4 114 51.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 3.3e-25 118.6 89 67.4
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 7.5e-25 117.5 121 48.8
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.2e-24 115.9 103 56.3
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 2.8e-24 115.5 106 50.9
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.5e-21 104.0 121 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-20 103.2 85 57.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 4.0e-18 95.1 54 79.6
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 8.0e-11 70.9 124 39.5


User provided reference genes

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