Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 1.1e-50 203.0 104 100.0
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.2e-39 166.4 98 83.7
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 6.4e-38 160.6 95 87.4
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.2e-36 156.4 95 83.2
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 5.1e-35 151.0 95 83.2
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 1.1e-34 149.8 97 80.4
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.3e-34 148.3 95 74.7
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 1.4e-32 142.9 79 87.3
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.4e-32 142.1 95 75.8
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 4.5e-31 137.9 97 76.3
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.3e-30 136.3 96 72.9
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 8.4e-30 133.7 96 74.0
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 1.1e-29 133.3 98 75.5
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 1.4e-29 132.9 95 76.8
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.9e-29 132.5 96 70.8
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.5e-29 132.1 95 74.7
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 3.2e-29 131.7 96 74.0
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 5.5e-29 131.0 89 75.3
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 7.1e-29 130.6 105 67.6
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.1e-28 129.0 95 72.6
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 2.7e-28 128.6 92 73.9
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 4.6e-28 127.9 94 77.7
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 6.0e-28 127.5 97 71.1
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 6.0e-28 127.5 96 74.0
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 7.9e-28 127.1 95 71.6
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.3e-27 126.3 97 73.2
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 1.8e-27 125.9 96 67.7
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.3e-27 125.6 97 70.1
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.3e-27 125.6 97 70.1
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 3.0e-27 125.2 97 69.1
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 3.9e-27 124.8 96 70.8
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 5.1e-27 124.4 89 70.8
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 8.7e-27 123.6 102 70.6
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 8.7e-27 123.6 97 69.1
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.5e-26 122.9 107 65.4
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 1.9e-26 122.5 82 75.6
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 5.7e-26 120.9 97 66.0
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 7.4e-26 120.6 83 73.5
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 2.1e-25 119.0 97 70.1
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 2.8e-25 118.6 96 68.8
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 4.8e-25 117.9 101 66.3
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 8.2e-25 117.1 95 70.5
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.1e-24 116.7 89 67.4
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 1.8e-24 115.9 100 65.0
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 2.4e-24 115.5 97 64.9
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 3.1e-24 115.2 103 63.1
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 3.1e-24 115.2 101 64.4
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 4.1e-24 114.8 97 67.0
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 5.3e-24 114.4 89 65.2
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 9.0e-24 113.6 97 66.0
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 9.0e-24 113.6 96 66.7
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 9.0e-24 113.6 97 63.9
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.2e-23 113.2 89 65.2
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 1.5e-23 112.8 89 65.2
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 1.5e-23 112.8 98 65.3
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 2.0e-23 112.5 96 65.6
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.4e-23 111.7 97 64.9
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 3.4e-23 111.7 102 58.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 3.4e-23 111.7 90 66.7
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 7.6e-23 110.5 98 64.3
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 7.6e-23 110.5 107 57.9
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.0e-22 110.2 98 65.3
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 1.3e-22 109.8 98 64.3
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.3e-22 109.8 94 61.7
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 1.7e-22 109.4 100 63.0
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.2e-22 109.0 94 61.7
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.2e-22 109.0 94 61.7
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.2e-22 109.0 98 65.3
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.8e-22 108.2 94 61.7
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 6.5e-22 107.5 98 62.2
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.4e-21 106.3 106 60.4
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 3.2e-21 105.1 101 60.4
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 7.2e-21 104.0 89 64.0
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 9.3e-21 103.6 98 64.3
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 2.7e-20 102.1 107 56.1
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.3e-19 99.8 92 57.6
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.3e-19 99.8 91 59.3
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 2.3e-19 99.0 100 62.0
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 2.3e-19 99.0 73 67.1
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 1.9e-18 95.9 60 71.7
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 2.5e-18 95.5 94 60.6
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 9.7e-18 93.6 99 59.6
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 9.7e-18 93.6 99 59.6
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 9.7e-18 93.6 90 60.0
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 1.6e-17 92.8 97 54.6
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 1.6e-17 92.8 94 53.2
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 2.2e-17 92.4 76 55.3
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 2.8e-17 92.0 123 47.2
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 4.8e-17 91.3 101 58.4
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 4.8e-17 91.3 86 61.6
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.8e-16 89.4 98 53.1
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 2.0e-15 85.9 84 56.0
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 2.0e-15 85.9 60 66.7
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 2.0e-15 85.9 60 66.7
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 2.0e-15 85.9 98 52.0
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 7.7e-15 84.0 100 52.0
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 3.8e-14 81.6 69 59.4
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 5.0e-14 81.3 98 54.1
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 1.9e-13 79.3 98 53.1
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 3.2e-13 78.6 73 54.8
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.6e-12 76.3 98 45.9
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.6e-12 76.3 95 43.2
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 2.1e-12 75.9 98 53.1
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 2.1e-12 75.9 95 53.7
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 2.1e-12 75.9 98 51.0
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 2.7e-12 75.5 45 80.0
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 1.4e-11 73.2 76 57.9
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 2.3e-11 72.4 69 56.5
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 8.8e-11 70.5 79 50.6
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 2.0e-10 69.3 76 55.3
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 2.8e-09 65.5 97 47.4
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 3.7e-09 65.1 107 47.7
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 4.8e-09 64.7 72 52.8
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 8.2e-09 63.9 100 46.0
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 8.2e-09 63.9 55 52.7
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.1e-08 62.0 62 64.5
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 5.3e-08 61.2 97 46.4
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 6.9e-08 60.8 99 42.4
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.2e-07 60.1 62 62.9
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 2.6e-07 58.9 83 49.4
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 5.9e-07 57.8 95 45.3
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 2.2e-06 55.8 38 57.9
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 2.2e-06 55.8 38 57.9
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 6.5e-06 54.3 37 64.9


User provided reference genes

Program Settings