Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35363 Davidia involucrata HOM05D005634 ORTHO05D006926 2.0e-83 312.4 158 100.0
Dinv29241 Davidia involucrata HOM05D005634 ORTHO05D006926 7.5e-54 214.2 172 71.5
Actinidia18672 Actinidia chinensis HOM05D005634 ORTHO05D006926 3.5e-51 205.3 171 67.3
QL09p007605 Quercus lobata HOM05D005634 ORTHO05D006926 6.5e-50 201.1 175 66.3
vmacro10142 Vaccinium macrocarpon HOM05D005634 ORTHO05D006926 1.9e-49 199.5 166 68.1
CSS0047779 Camellia sinensis var. sinensis HOM05D005634 ORTHO05D006926 2.5e-49 199.1 165 71.5
Cfa016192 Carpinus fangiana HOM05D005634 ORTHO05D006926 5.5e-49 198.0 168 65.5
CiPaw.05G201100 Carya illinoinensis HOM05D005634 ORTHO05D006926 1.2e-48 196.8 165 66.1
Ciclev10021946m.g Citrus clementina HOM05D005634 ORTHO05D006926 4.7e-48 194.9 169 66.3
GSVIVG01038606001 Vitis vinifera HOM05D005634 ORTHO05D006926 3.0e-47 192.2 169 66.3
TWI39G0994 Tripterygium wilfordii HOM05D005634 ORTHO05D006926 4.0e-47 191.8 172 62.2
Atru.chr12.2317 Acer truncatum HOM05D005634 ORTHO05D006926 5.2e-47 191.4 169 66.9
Rhsim09G0207900 Rhododendron simsii HOM05D005634 ORTHO05D006926 6.8e-47 191.0 184 63.6
TAR629G3370 Trochodendron aralioides HOM05D005634 ORTHO05D006926 7.5e-46 187.6 168 64.9
Haze_00263 Corylus avellana HOM05D005634 ORTHO05D006926 1.3e-45 186.8 98 90.8
VMungo1309G1289 Vigna mungo HOM05D005634 ORTHO05D006926 2.8e-45 185.7 163 64.4
Potri.015G008000 Populus trichocarpa HOM05D005634 ORTHO05D006926 3.7e-45 185.3 174 60.9
Oeu037042.1 Olea europaea HOM05D005634 ORTHO05D006926 4.8e-45 184.9 155 67.1
MD01G1225500 Malus domestica HOM05D005634 ORTHO05D006926 8.3e-45 184.1 164 66.5
Manes.01G037500 Manihot esculenta HOM05D005634 ORTHO05D006926 8.3e-45 184.1 168 61.9
arahy.Tifrunner.gnm1.ann1.P45MK1 Arachis hypogaea HOM05D005634 ORTHO05D006926 1.1e-44 183.7 161 64.0
arahy.Tifrunner.gnm1.ann1.WWF9U9 Arachis hypogaea HOM05D005634 ORTHO05D006926 1.1e-44 183.7 161 64.0
PGR142G2679 Punica granatum HOM05D005634 ORTHO05D006926 1.1e-44 183.7 125 72.8
ECA233G0867 Erigeron canadensis HOM05D005634 ORTHO05D006926 1.4e-44 183.3 166 62.7
Lj1g0021546 Lotus japonicus HOM05D005634 ORTHO05D006926 1.4e-44 183.3 164 64.0
Eucgr.K00410 Eucalyptus grandis HOM05D005634 ORTHO05D006926 1.8e-44 183.0 174 59.2
Sabra15G0006100 Salix brachista HOM05D005634 ORTHO05D006926 2.4e-44 182.6 98 88.8
RcHm_v2.0_Chr1g0381981 Rosa chinensis HOM05D005634 ORTHO05D006926 5.4e-44 181.4 161 63.4
EL10Ac3g05237 Beta vulgaris HOM05D005634 ORTHO05D006926 7.0e-44 181.0 171 60.2
AUR62035571 Chenopodium quinoa HOM05D005634 ORTHO05D006926 7.0e-44 181.0 171 61.4
Glyma.04G232400 Glycine max HOM05D005634 ORTHO05D006926 9.1e-44 180.6 163 63.8
Phvul.009G048400 Phaseolus vulgaris HOM05D005634 ORTHO05D006926 9.1e-44 180.6 122 77.0
Potri.012G020700 Populus trichocarpa HOM05D005634 ORTHO05D006926 9.1e-44 180.6 174 59.8
Glyma.06G132600 Glycine max HOM05D005634 ORTHO05D006926 1.2e-43 180.3 163 62.6
Oeu061008.1 Olea europaea HOM05D005634 ORTHO05D006926 1.2e-43 180.3 161 64.0
MELO3C019382.2 Cucumis melo HOM05D005634 ORTHO05D006926 1.6e-43 179.9 98 86.7
CsaV3_3G019650 Cucumis sativus L. HOM05D005634 ORTHO05D006926 1.6e-43 179.9 98 86.7
DCAR_014553 Daucus carota HOM05D005634 ORTHO05D006926 1.6e-43 179.9 153 64.1
Glyma.14G118100 Glycine max HOM05D005634 ORTHO05D006926 1.6e-43 179.9 164 62.2
MBI12_g30967_MAGBIO Magnolia biondii HOM05D005634 ORTHO05D006926 2.0e-43 179.5 153 66.0
CDE11G0057 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 2.7e-43 179.1 98 84.7
Migut.F00174 Erythranthe guttata HOM05D005634 ORTHO05D006926 2.7e-43 179.1 157 63.7
Nn1g00367 Nelumbo nucifera HOM05D005634 ORTHO05D006926 2.7e-43 179.1 159 64.2
Thecc.03G204700 Theobroma cacao HOM05D005634 ORTHO05D006926 2.7e-43 179.1 168 62.5
MD07G1296000 Malus domestica HOM05D005634 ORTHO05D006926 3.5e-43 178.7 164 62.8
FAN10G1744 Fragaria x ananassa HOM05D005634 ORTHO05D006926 4.5e-43 178.3 166 62.0
SGA_v2.0_scaffold18G08443 Striga asiatica HOM05D002361 ORTHO05D006926 4.5e-43 178.3 153 64.1
FvH4_7g32420 Fragaria vesca HOM05D005634 ORTHO05D006926 5.9e-43 177.9 161 64.0
Lj3A901T75 Lonicera japonica HOM05D005634 ORTHO05D006926 5.9e-43 177.9 92 91.3
Prupe.2G315600 Prunus persica HOM05D005634 ORTHO05D006926 5.9e-43 177.9 161 63.4
CANSAT21G2451 Cannabis sativa HOM05D005634 ORTHO05D006926 7.7e-43 177.6 169 61.5
FAN03G3354 Fragaria x ananassa HOM05D005634 ORTHO05D006926 7.7e-43 177.6 166 61.4
Sed0004447 Sechium edule HOM05D005634 ORTHO05D006926 7.7e-43 177.6 147 65.3
FAN01G0994 Fragaria x ananassa HOM05D005634 ORTHO05D006926 1.0e-42 177.2 166 61.4
ATR0620G015 Amborella trichopoda HOM05D005634 ORTHO05D006926 1.3e-42 176.8 92 90.2
CDE09G0596 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 1.3e-42 176.8 156 61.5
Zm00001eb319210 Zea mays HOM05D005634 ORTHO05D006926 1.3e-42 176.8 120 75.0
Aqoxy5G04258 Aquilegia oxysepala HOM05D005634 ORTHO05D006926 1.7e-42 176.4 164 61.0
MSTRG.27003 Avicennia marina HOM05D005634 ORTHO05D006926 2.2e-42 176.0 157 65.6
SalBow4G1390 Salvia bowleyana HOM05D005634 ORTHO05D006926 2.2e-42 176.0 93 90.3
Gohir.A08G102100 Gossypium hirsutum HOM05D005634 ORTHO05D006926 2.9e-42 175.6 167 58.1
Cpa.g.sc3.123 Carica papaya HOM05D005634 ORTHO05D006926 3.8e-42 175.3 167 62.9
Cc02_g01130 Coffea canephora HOM05D005634 ORTHO05D006926 3.8e-42 175.3 145 64.8
Os09g0530000 Oryza sativa ssp. japonica HOM05D005634 ORTHO05D006926 3.8e-42 175.3 93 88.2
HanXRQChr06g0175631 Helianthus annuus HOM05D005634 ORTHO05D006926 5.0e-42 174.9 161 62.7
Gohir.D08G113300 Gossypium hirsutum HOM05D005634 ORTHO05D006926 6.5e-42 174.5 167 58.1
Duzib084G0100 Durio zibethinus HOM05D005634 ORTHO05D006926 8.5e-42 174.1 120 73.3
Lalb_Chr11g0067121 Lupinus albus HOM05D005634 ORTHO05D006926 8.5e-42 174.1 163 62.0
Peaxi162Scf00618g00219 Petunia axillaris HOM05D005634 ORTHO05D006926 8.5e-42 174.1 164 64.0
AUR62006058 Chenopodium quinoa HOM05D005634 ORTHO05D006926 1.1e-41 173.7 172 58.7
Gorai.004G122200 Gossypium raimondii HOM05D005634 ORTHO05D006926 1.5e-41 173.3 167 57.5
COL.COLO4_16824 Corchorus olitorius HOM05D005634 ORTHO05D006926 1.9e-41 172.9 165 61.8
Lsat_1_v5_gn_8_5560 Lactuca sativa HOM05D005634 ORTHO05D006926 1.9e-41 172.9 160 63.1
Medtr3g092040 Medicago truncatula HOM05D005634 ORTHO05D006926 1.9e-41 172.9 124 69.4
Ah.07g205160 Amaranthus hybridus HOM05D005634 ORTHO05D006926 2.5e-41 172.6 170 58.2
Nitab4.5_0000015g0180 Nicotiana tabacum HOM05D005634 ORTHO05D006926 2.5e-41 172.6 159 62.9
PGSC0003DMG400005464 Solanum tuberosum HOM05D005634 ORTHO05D006926 4.2e-41 171.8 166 60.8
CAN.G414.9 Capsicum annuum HOM05D005634 ORTHO05D006926 5.5e-41 171.4 163 61.3
Ca_16737_v3 Cicer arietinum L. HOM05D005634 ORTHO05D006926 7.2e-41 171.0 163 58.9
Psat5g074680 Pisum sativum HOM05D005634 ORTHO05D006926 9.5e-41 170.6 163 59.5
Sabra12G0012500 Salix brachista HOM05D005634 ORTHO05D006926 9.5e-41 170.6 186 54.8
AL7G24960 Arabidopsis lyrata HOM05D005634 ORTHO05D006926 1.6e-40 169.9 151 61.6
Carub.0007s1312 Capsella rubella HOM05D005634 ORTHO05D006926 1.6e-40 169.9 153 62.1
Lalb_Chr08g0239991 Lupinus albus HOM05D005634 ORTHO05D006926 1.6e-40 169.9 163 60.1
Sc25g0000970 Simmondsia chinensis HOM05D005634 ORTHO05D006926 1.6e-40 169.9 98 80.6
A01p19140 Brassica napus HOM05D005634 ORTHO05D006926 2.1e-40 169.5 154 61.7
Sabra05G0139500 Salix brachista HOM05D005634 ORTHO05D006926 2.1e-40 169.5 170 57.6
unitig_0.g1985 Utricularia gibba HOM05D005634 ORTHO05D006926 2.1e-40 169.5 93 84.9
AT4G27700 Arabidopsis thaliana HOM05D005634 ORTHO05D006926 2.7e-40 169.1 151 61.6
BcaC09g50547 Brassica carinata HOM05D005634 ORTHO05D006926 2.7e-40 169.1 154 61.7
C01p24050 Brassica napus HOM05D005634 ORTHO05D006926 2.7e-40 169.1 154 61.7
BolC1t02361H Brassica oleracea HOM05D005634 ORTHO05D006926 2.7e-40 169.1 154 61.7
THA.LOC104799954 Tarenaya hassleriana HOM05D005634 ORTHO05D006926 2.7e-40 169.1 155 61.3
Thhalv10026171m.g Eutrema salsugineum HOM05D005634 ORTHO05D006926 3.6e-40 168.7 154 60.4
BraA01t01856Z Brassica rapa HOM05D005634 ORTHO05D006926 4.7e-40 168.3 154 61.0
PSO782G0763 Papaver somniferum HOM05D005634 ORTHO05D006926 4.7e-40 168.3 142 65.5
BcaNung01637 Brassica carinata HOM05D005634 ORTHO05D006926 6.1e-40 167.9 158 60.8
CARHR235430 Cardamine hirsuta HOM05D005634 ORTHO05D006926 8.0e-40 167.5 152 60.5
Nitab4.5_0001829g0010 Nicotiana tabacum HOM05D005634 ORTHO05D006926 8.0e-40 167.5 165 61.2
Solyc06g053140.3 Solanum lycopersicum HOM05D005634 ORTHO05D006926 2.3e-39 166.0 160 61.9
Sopen06g018200 Solanum pennellii HOM05D005634 ORTHO05D006926 8.8e-39 164.1 160 60.6
Aa31LG11G15270 Aethionema arabicum HOM05D005634 ORTHO05D006926 2.0e-38 162.9 152 59.9
SEGI_37163 Sequoiadendron giganteum HOM05D005634 ORTHO05D006926 4.9e-37 158.3 124 62.9
BcaC03g17858 Brassica carinata HOM05D005634 ORTHO05D006926 3.1e-36 155.6 96 74.0
Sp7g25680 Schrenkiella parvula HOM05D005634 ORTHO05D006926 3.8e-34 148.7 159 54.1
Mapoly0050s0021 Marchantia polymorpha HOM05D005634 ORTHO05D006926 2.5e-33 146.0 92 72.8
Hund21024 Selenicereus undatus HOM05D005634 ORTHO05D006926 6.1e-32 141.4 81 82.7
AagrBONN_evm.TU.Sc2ySwM_344.430 Anthoceros agrestis HOM05D005634 ORTHO05D006926 8.0e-32 141.0 109 62.4
A07p23910 Brassica napus HOM05D005634 ORTHO05D006926 8.9e-31 137.5 88 71.6
BraA10t44343Z Brassica rapa HOM05D005634 ORTHO05D006926 1.2e-30 137.1 85 74.1
SMO141G0293 Selaginella moellendorffii HOM05D005634 ORTHO05D006926 2.0e-30 136.3 91 68.1
Pp3c15_4960 Physcomitrium patens HOM05D005634 ORTHO05D006926 2.9e-29 132.5 135 54.8
ClCG05G009130 Citrullus lanatus HOM05D005634 ORTHO05D006926 1.6e-27 126.7 136 54.4
TPR.G33661 Trifolium pratense HOM05D005634 ORTHO05D006926 5.9e-27 124.8 68 83.8
BcaC01g00747 Brassica carinata HOM05D005634 ORTHO05D006926 3.0e-26 122.5 70 78.6
CBR_g3780 Chara braunii HOM05D005634 ORTHO05D006926 1.1e-25 120.6 89 62.9
Hma1.2p1_0512F.1_g169290 Hydrangea macrophylla HOM05D005634 ORTHO05D006926 2.3e-18 96.3 127 59.8
Cre16.g650050 Chlamydomonas reinhardtii HOM05D005634 ORTHO05D006926 3.7e-13 79.0 70 47.1
C02p59000 Brassica napus HOM05D005634 ORTHO05D006926 5.4e-12 75.1 50 68.0
BolC2t11955H Brassica oleracea HOM05D005634 ORTHO05D006926 5.4e-12 75.1 50 68.0
C03p83850 Brassica napus HOM05D005634 ORTHO05D006926 2.7e-11 72.8 50 68.0
C09p11080 Brassica napus HOM05D005634 ORTHO05D006926 2.7e-11 72.8 50 68.0
BolC3t20661H Brassica oleracea HOM05D005634 ORTHO05D006926 2.7e-11 72.8 50 68.0
HPP92_002499 Vanilla planifolia HOM05D005634 ORTHO05D006926 3.9e-10 68.9 41 73.2
AagrBONN_evm.TU.Sc2ySwM_362.2890 Anthoceros agrestis HOM05D005634 ORTHO05D006926 3.4e-06 55.8 95 32.6
SMO169G0172 Selaginella moellendorffii HOM05D005634 ORTHO05D006926 4.4e-06 55.5 88 33.0
Ah.09g223950 Amaranthus hybridus HOM05D000495 ORTHO05D000357 9.9e-06 54.3 34 76.5


User provided reference genes

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